| scholarly article | Q13442814 |
| P6179 | Dimensions Publication ID | 1064134580 |
| P356 | DOI | 10.1186/PREACCEPT-8577431391252814 |
| 10.1186/S13059-014-0451-X | ||
| P932 | PMC publication ID | 4189735 |
| P698 | PubMed publication ID | 25201068 |
| P50 | author | Adrian Peter Bird | Q373925 |
| Thomas Clouaire | Q59506152 | ||
| P2093 | author name string | Shaun Webb | |
| P2860 | cites work | Differential expression analysis for sequence count data | Q21184103 |
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| Molecular regulation of H3K4 trimethylation by Wdr82, a component of human Set1/COMPASS | Q24320097 | ||
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| The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4 | Q24536072 | ||
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| High-resolution profiling of histone methylations in the human genome | Q27860906 | ||
| A bivalent chromatin structure marks key developmental genes in embryonic stem cells | Q27860977 | ||
| Chromatin modifications and their function | Q27861067 | ||
| Histone modification: cause or cog? | Q52613857 | ||
| CpG islands influence chromatin structure via the CpG-binding protein Cfp1. | Q37061200 | ||
| The MLL3/MLL4 branches of the COMPASS family function as major histone H3K4 monomethylases at enhancers | Q37336099 | ||
| Global analysis of H3K4 methylation defines MLL family member targets and points to a role for MLL1-mediated H3K4 methylation in the regulation of transcriptional initiation by RNA polymerase II. | Q37410397 | ||
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| Open chromatin in pluripotency and reprogramming | Q37477736 | ||
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| Cfp1 integrates both CpG content and gene activity for accurate H3K4me3 deposition in embryonic stem cells | Q39303678 | ||
| CXXC finger protein 1 is required for normal proliferation and differentiation of the PLB-985 myeloid cell line | Q40165492 | ||
| CpG island chromatin: a platform for gene regulation | Q41090075 | ||
| Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing | Q41999449 | ||
| A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling | Q42252373 | ||
| XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast. | Q51547969 | ||
| COMPASS: a complex of proteins associated with a trithorax-related SET domain protein | Q27931344 | ||
| Dynamic lysine methylation on histone H3 defines the regulatory phase of gene transcription | Q27932721 | ||
| The complex language of chromatin regulation during transcription | Q28131748 | ||
| Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes | Q28255974 | ||
| Using galaxy to perform large-scale interactive data analyses | Q28277397 | ||
| Regulation of nucleosome dynamics by histone modifications | Q28286686 | ||
| Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters | Q28302903 | ||
| CpG islands and the regulation of transcription | Q28315762 | ||
| Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae | Q28343956 | ||
| Multiple epigenetic maintenance factors implicated by the loss of Mll2 in mouse development | Q28587425 | ||
| Role for Dpy-30 in ES cell-fate specification by regulation of H3K4 methylation within bivalent domains | Q28591813 | ||
| Dynamic histone H3 methylation during gene induction: HYPB/Setd2 mediates all H3K36 trimethylation | Q28593817 | ||
| A chromatin landmark and transcription initiation at most promoters in human cells | Q29547180 | ||
| Mapping and analysis of chromatin state dynamics in nine human cell types | Q29547552 | ||
| Active genes are tri-methylated at K4 of histone H3 | Q29547668 | ||
| Targeted recruitment of Set1 histone methylase by elongating Pol II provides a localized mark and memory of recent transcriptional activity | Q29555842 | ||
| Divergent transcription from active promoters | Q29614332 | ||
| Genomic maps and comparative analysis of histone modifications in human and mouse | Q29614418 | ||
| Chromatin signatures of pluripotent cell lines | Q29614675 | ||
| A genomewide study identifies the Wnt signaling pathway as a major target of p53 in murine embryonic stem cells | Q33591375 | ||
| Global transcriptional and translational repression in human-embryonic-stem-cell-derived Rett syndrome neurons | Q33740090 | ||
| Reduced genomic cytosine methylation and defective cellular differentiation in embryonic stem cells lacking CpG binding protein | Q33836835 | ||
| The Mll2 branch of the COMPASS family regulates bivalent promoters in mouse embryonic stem cells | Q34037799 | ||
| Systematic protein location mapping reveals five principal chromatin types in Drosophila cells | Q34141226 | ||
| The COMPASS family of H3K4 methylases in Drosophila | Q34211667 | ||
| Three-dimensional folding and functional organization principles of the Drosophila genome | Q34248756 | ||
| R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters | Q34258378 | ||
| Genome-wide chromatin state transitions associated with developmental and environmental cues | Q34323419 | ||
| Two distinct repressive mechanisms for histone 3 lysine 4 methylation through promoting 3'-end antisense transcription | Q34426590 | ||
| CpG-binding protein (CXXC finger protein 1) is a component of the mammalian Set1 histone H3-Lys4 methyltransferase complex, the analogue of the yeast Set1/COMPASS complex | Q34463476 | ||
| The genomic landscape of histone modifications in human T cells | Q35094537 | ||
| Drosophila Set1 is the major histone H3 lysine 4 trimethyltransferase with role in transcription. | Q35177234 | ||
| Distinct regulatory mechanisms and functions for p53-activated and p53-repressed DNA damage response genes in embryonic stem cells | Q35892477 | ||
| Set3 HDAC mediates effects of overlapping noncoding transcription on gene induction kinetics. | Q36287609 | ||
| Enhancer-associated H3K4 monomethylation by Trithorax-related, the Drosophila homolog of mammalian Mll3/Mll4 | Q36464986 | ||
| H3K4me3 interactions with TAF3 regulate preinitiation complex assembly and selective gene activation | Q36657584 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P4510 | describes a project that uses | DESeq2 | Q113018293 |
| P433 | issue | 9 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 451 | |
| P577 | publication date | 2014-09-04 | |
| P1433 | published in | Genome Biology | Q5533480 |
| P1476 | title | Cfp1 is required for gene expression-dependent H3K4 trimethylation and H3K9 acetylation in embryonic stem cells | |
| P478 | volume | 15 |
| Q89640786 | Acetylation of H3K4, H3K9, and H3K27 mediated by p300 regulates the expression of GATA4 in cardiocytes |
| Q47295917 | Bivalent Epigenetic Control of Oncofetal Gene Expression in Cancer |
| Q58699447 | CFP1 coordinates histone H3 lysine-4 trimethylation and meiotic cell cycle progression in mouse oocytes |
| Q64092210 | CG dinucleotides enhance promoter activity independent of DNA methylation |
| Q36933025 | CXXC finger protein 1 is critical for T-cell intrathymic development through regulating H3K4 trimethylation |
| Q58549104 | CXXC1 is not essential for normal DNA double-strand break formation and meiotic recombination in mouse |
| Q41040060 | Coactivators and general transcription factors have two distinct dynamic populations dependent on transcription |
| Q58781713 | Cxxc Finger Protein 1 Positively Regulates GM-CSF-Derived Macrophage Phagocytosis Through Csf2rα-Mediated Signaling |
| Q28080288 | Deciphering the Epigenetic Code in Embryonic and Dental Pulp Stem Cells |
| Q35849485 | Disrupted intricacy of histone H3K4 methylation in neurodevelopmental disorders |
| Q34505555 | Embryonic transcription is controlled by maternally defined chromatin state. |
| Q50217919 | Not All H3K4 Methylations Are Created Equal: Mll2/COMPASS Dependency in Primordial Germ Cell Specification. |
| Q36155203 | Nucleosome competition reveals processive acetylation by the SAGA HAT module. |
| Q37686850 | PRDM9 interactions with other proteins provide a link between recombination hotspots and the chromosomal axis in meiosis |
| Q90644667 | Physical and functional interaction between SET1/COMPASS complex component CFP-1 and a Sin3S HDAC complex in C. elegans |
| Q37662090 | Piwil2 is reactivated by HPV oncoproteins and initiates cell reprogramming via epigenetic regulation during cervical cancer tumorigenesis |
| Q47100956 | Striking a balance: regulation of transposable elements by Zfp281 and Mll2 in mouse embryonic stem cells |
| Q42048922 | The SET1 Complex Selects Actively Transcribed Target Genes via Multivalent Interaction with CpG Island Chromatin. |
| Q92447183 | The long non-coding RNA Snhg3 is essential for mouse embryonic stem cell self-renewal and pluripotency |
| Q57045701 | Tri-methylation of histone H3 lysine 4 facilitates gene expression in ageing cells |
| Q39268171 | Writing, erasing and reading histone lysine methylations. |
| Q31025257 | csaw: a Bioconductor package for differential binding analysis of ChIP-seq data using sliding windows |
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