Topography of the euryarchaeal transcription initiation complex

scientific article published on 13 November 2003

Topography of the euryarchaeal transcription initiation complex is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1074/JBC.M311429200
P698PubMed publication ID14617625
P5875ResearchGate publication ID9008295

P2093author name stringMichael Thomm
E Peter Geiduschek
Michael S Bartlett
P2860cites workEvents during initiation of archaeal transcription: open complex formation and DNA-protein interactionsQ24548911
The structural basis for the oriented assembly of a TBP/TFB/promoter complexQ24644960
Trajectory of DNA in the RNA polymerase II transcription preinitiation complexQ24653323
Activation of archaeal transcription by recruitment of the TATA-binding proteinQ24677869
Structural basis of preinitiation complex assembly on human pol II promotersQ27620858
Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolutionQ27631276
Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolutionQ27631280
Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolutionQ27638951
Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolutionQ27639011
Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complexQ27639013
Crystal structure of a transcription factor IIIB core interface ternary complexQ27640838
Architecture of initiation-competent 12-subunit RNA polymerase IIQ27641248
Complete, 12-subunit RNA polymerase II at 4.1-Å resolution: Implications for the initiation of transcriptionQ27641250
The N-terminal domain of TFIIB from Pyrococcus furiosus forms a zinc ribbonQ27732515
The RNA polymerase III transcription initiation factor TFIIIB participates in two steps of promoter openingQ27933883
Evidence that transcription factor IIB is required for a post-assembly step in transcription initiationQ27936096
Mechanism of ATP-dependent promoter melting by transcription factor IIHQ28145224
Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymologyQ28201683
The general transcription factors of RNA polymerase IIQ28298663
The role of transcription factor B in transcription initiation and promoter clearance in the archaeon Sulfolobus acidocaldarius.Q30860807
Transcription initiation in Archaea: facts, factors and future aspectsQ33592579
Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.Q33875224
Structural organization of the RNA polymerase-promoter open complexQ33909289
Transcription in archaea: similarity to that in eucaryaQ34058138
A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcriptionQ34156990
The RNA polymerase III transcription apparatusQ34289921
Cloning and functional analysis of the TATA binding protein from Sulfolobus shibataeQ34313343
The RNA polymerase II machinery: structure illuminates functionQ34574312
Orientation and topography of RNA polymerase III in transcription complexesQ34730169
A structural model of transcription elongationQ38310043
Sequence-specific DNA binding by the S. shibatae TFIIB homolog, TFB, and its effect on promoter strengthQ38335620
Promoter recognition as measured by binding of polymerase to nontemplate strand oligonucleotideQ38345770
TFE, an archaeal transcription factor in Methanobacterium thermoautotrophicum related to eucaryal transcription factor TFIIEalphaQ39502898
A cell-free transcription system for the hyperthermophilic archaeon Pyrococcus furiosusQ39716692
An archaebacterial cell-free transcription system. The expression of tRNA genes from Methanococcus vannielii is mediated by a transcription factorQ40515049
Elements of an archaeal promoter defined by mutational analysisQ40534896
The role of human TFIIB in transcription start site selection in vitro and in vivoQ40955311
Alignment of the B" subunit of RNA polymerase III transcription factor IIIB in its promoter complexQ41692044
The orientation of DNA in an archaeal transcription initiation complexQ41758705
The archaeal TFIIEalpha homologue facilitates transcription initiation by enhancing TATA-box recognitionQ42246217
Transcriptional regulation of an archaeal operon in vivo and in vitroQ42482342
Identification of a conserved archaeal RNA polymerase subunit contacted by the basal transcription factor TFB.Q42511614
The role of transcription initiation factor IIIB subunits in promoter opening probed by photochemical cross-linkingQ42595020
Analysis of the open region and of DNA-protein contacts of archaeal RNA polymerase transcription complexes during transition from initiation to elongationQ42600714
The N-terminal region of yeast TFIIB contains two adjacent functional domains involved in stable RNA polymerase II binding and transcription start site selectionQ47891418
The TATA-binding protein: a general transcription factor in eukaryotes and archaebacteriaQ48082429
Photochemical cross-linking assay for DNA tracking by replication proteinsQ49139477
Two transcription factors related with the eucaryal transcription factors TATA-binding protein and transcription factor IIB direct promoter recognition by an archaeal RNA polymerase.Q54576699
Control regions of an archaeal gene. A TATA box and an initiator element promote cell-free transcription of the tRNA(Val) gene of Methanococcus vannielii.Q54687628
P433issue7
P407language of work or nameEnglishQ1860
P304page(s)5894-5903
P577publication date2003-11-13
P1433published inJournal of Biological ChemistryQ867727
P1476titleTopography of the euryarchaeal transcription initiation complex
P478volume279

Reverse relations

cites work (P2860)
Q37014709A whole-genome approach to identifying protein binding sites: promoters in Methanocaldococcus (Methanococcus) jannaschii
Q38326186Activation of archaeal transcription mediated by recruitment of transcription factor B.
Q37830691Archaeal RNA polymerase and transcription regulation.
Q36139379Archaeal transcription and its regulators
Q41911712Archaeal transcription: function of an alternative transcription factor B from Pyrococcus furiosus
Q22065915Cell evolution and Earth history: stasis and revolution
Q54293750Complete architecture of the archaeal RNA polymerase open complex from single-molecule FRET and NPS.
Q103804238Direct binding of TFEα opens DNA binding cleft of RNA polymerase
Q42483408Direct modulation of RNA polymerase core functions by basal transcription factors.
Q37828367Evolution of multisubunit RNA polymerases in the three domains of life.
Q33705214Functional analysis of the three TATA binding protein homologs in Methanosarcina acetivorans
Q27934596Mitochondrial transcription factor Mtf1 traps the unwound non-template strand to facilitate open complex formation
Q37235338Protein-coding gene promoters in Methanocaldococcus (Methanococcus) jannaschii.
Q27657756RNA polymerase II-TFIIB structure and mechanism of transcription initiation
Q33760267Rearrangement of the RNA polymerase subunit H and the lower jaw in archaeal elongation complexes
Q34048446Regulation of tryptophan operon expression in the archaeon Methanothermobacter thermautotrophicus
Q34600383Role of the Sulfolobus shibatae viral T6 initiator in conferring promoter strength and in influencing transcription start site selection
Q33432121Static and kinetic site-specific protein-DNA photocrosslinking: analysis of bacterial transcription initiation complexes
Q34662819Structure and function of archaeal RNA polymerases.
Q35758805Structure and mechanism of the RNA polymerase II transcription machinery
Q33242749TTSV1, a new virus-like particle isolated from the hyperthermophilic crenarchaeote Thermoproteus tenax
Q42545231The RNA polymerase trigger loop functions in all three phases of the transcription cycle.
Q38461461The interplay between nucleoid organization and transcription in archaeal genomes
Q38823441Transcription Regulation in Archaea
Q39964550Transcription by Methanothermobacter thermautotrophicus RNA polymerase in vitro releases archaeal transcription factor B but not TATA-box binding protein from the template DNA.
Q46962379Transcription factor E is a part of transcription elongation complexes
Q38321547TrmB, a sugar sensing regulator of ABC transporter genes in Pyrococcus furiosus exhibits dual promoter specificity and is controlled by different inducers

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