| review article | Q7318358 |
| scholarly article | Q13442814 |
| P50 | author | Momoko Tajiri | Q81954727 |
| P2093 | author name string | Katsuhiko S Murakami | |
| Sung-Hoon Jun | |||
| Matthew J Reichlen | |||
| P2860 | cites work | Evolution of complex RNA polymerases: the complete archaeal RNA polymerase structure | Q21145826 |
| The Methanosarcina barkeri Genome: Comparative Analysis with Methanosarcina acetivorans and Methanosarcina mazei Reveals Extensive Rearrangement within Methanosarcinal Genomes | Q22065484 | ||
| Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes | Q22065752 | ||
| The genome of M. acetivorans reveals extensive metabolic and physiological diversity | Q22065756 | ||
| Complete Genome Sequence of an Aerobic Hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1 | Q22066070 | ||
| Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya | Q22066209 | ||
| Genome sequence of Halobacterium species NRC-1 | Q22066243 | ||
| The complete genome of the crenarchaeon Sulfolobus solfataricus P2 | Q22066249 | ||
| TRF3, a TATA-box-binding protein-related factor, is vertebrate-specific and widely expressed | Q24300392 | ||
| Structure-function analysis of the human TFIIB-related factor II protein reveals an essential role for the C-terminal domain in RNA polymerase III transcription | Q24534953 | ||
| Phylogenetic structure of the prokaryotic domain: The primary kingdoms | Q24564821 | ||
| The structural basis for the oriented assembly of a TBP/TFB/promoter complex | Q24644960 | ||
| Activation of archaeal transcription by recruitment of the TATA-binding protein | Q24677869 | ||
| Crystal structure and RNA binding of the Rpb4/Rpb7 subunits of human RNA polymerase II | Q24817079 | ||
| Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution | Q27631276 | ||
| The crenarchaeal DNA damage-inducible transcription factor B paralogue TFB3 is a general activator of transcription | Q47750964 | ||
| Transcription and translation in Archaea: a mosaic of eukaryal and bacterial features | Q47797051 | ||
| Isolation of TBP-interacting protein (TIP) from a hyperthermophilic archaeon that inhibits the binding of TBP to TATA-DNA. | Q47928962 | ||
| Expression and heat-responsive regulation of a TFIIB homologue from the archaeon Haloferax volcanii. | Q47931317 | ||
| The TATA-binding protein: a general transcription factor in eukaryotes and archaebacteria | Q48082429 | ||
| Yeast RNA polymerase II subunit RPB9 is essential for growth at temperature extremes. | Q48206014 | ||
| Structural analysis of the Bacillus subtilis delta factor: a protein polyanion which displaces RNA from RNA polymerase. | Q54603925 | ||
| Transcriptional regulation in Archaea | Q57104778 | ||
| [19] Preparation of components of archaeal transcription preinitiation complex | Q63383574 | ||
| DNA-dependent RNA polymerase from Halobacterium halobium | Q67416168 | ||
| Transcription factor S, a cleavage induction factor of the archaeal RNA polymerase | Q73703985 | ||
| Is gene expression in Halobacterium NRC-1 regulated by multiple TBP and TFB transcription factors? | Q73874047 | ||
| A novel archaeal transcriptional regulator of heat shock response | Q78378152 | ||
| Transcription factor B contacts promoter DNA near the transcription start site of the archaeal transcription initiation complex | Q79248107 | ||
| The RPB7 orthologue E' is required for transcriptional activity of a reconstituted archaeal core enzyme at low temperatures and stimulates open complex formation | Q79802918 | ||
| Structural biology of RNA polymerase III: subcomplex C17/25 X-ray structure and 11 subunit enzyme model | Q79833105 | ||
| Protein-protein interactions in the archaeal transcriptional machinery: binding studies of isolated RNA polymerase subunits and transcription factors | Q80050442 | ||
| The Sulfolobus solfataricus Lrp-like protein LysM regulates lysine biosynthesis in response to lysine availability | Q44013210 | ||
| A new factor related to TATA-binding protein has highly restricted expression patterns in Drosophila | Q44074905 | ||
| High-resolution protein-DNA contacts for the yeast RNA polymerase II general transcription machinery | Q45087942 | ||
| Mapping the location of TFIIB within the RNA polymerase II transcription preinitiation complex: a model for the structure of the PIC. | Q45103213 | ||
| Variations in the multiple tbp genes in different Halobacterium salinarum strains and their expression during growth | Q46189272 | ||
| RNA emerging from the active site of RNA polymerase II interacts with the Rpb7 subunit | Q46835516 | ||
| Topography of the euryarchaeal transcription initiation complex | Q46946945 | ||
| Transcription factor E is a part of transcription elongation complexes | Q46962379 | ||
| Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution | Q27631280 | ||
| Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 A resolution | Q27639011 | ||
| Structural basis of transcription initiation: an RNA polymerase holoenzyme-DNA complex | Q27639013 | ||
| Functional architecture of RNA polymerase I | Q27649429 | ||
| The X-ray crystal structure of RNA polymerase from Archaea | Q27649741 | ||
| RNA polymerase II-TFIIB structure and mechanism of transcription initiation | Q27657756 | ||
| Structure of an RNA Polymerase II-TFIIB Complex and the Transcription Initiation Mechanism | Q27658448 | ||
| Solution structure of the N-terminal domain of Bacillus subtilis delta subunit of RNA polymerase and its classification based on structural homologs | Q27660307 | ||
| 1.9 A resolution refined structure of TBP recognizing the minor groove of TATAAAAG | Q27729813 | ||
| The N-terminal domain of TFIIB from Pyrococcus furiosus forms a zinc ribbon | Q27732515 | ||
| Crystal structure of a human TATA box-binding protein/TATA element complex | Q27732747 | ||
| The 2.1-A crystal structure of an archaeal preinitiation complex: TATA-box-binding protein/transcription factor (II)B core/TATA-box | Q27738757 | ||
| The RNA polymerase III transcription initiation factor TFIIIB participates in two steps of promoter opening | Q27933883 | ||
| RNA polymerase II subunit Rpb9 is important for transcriptional fidelity in vivo | Q27933951 | ||
| Structures of complete RNA polymerase II and its subcomplex, Rpb4/7. | Q27935627 | ||
| The recruitment of RNA polymerase I on rDNA is mediated by the interaction of the A43 subunit with Rrn3 | Q27939833 | ||
| Mechanism of ATP-dependent promoter melting by transcription factor IIH | Q28145224 | ||
| Control of gene expression through regulation of the TATA-binding protein | Q28145475 | ||
| The genome of Methanosarcina mazei: evidence for lateral gene transfer between bacteria and archaea | Q28215173 | ||
| A molecular view of microbial diversity and the biosphere | Q28235782 | ||
| Molecular genetics of the RNA polymerase II general transcriptional machinery | Q29620260 | ||
| The interaction of Alba, a conserved archaeal chromatin protein, with Sir2 and its regulation by acetylation | Q31047769 | ||
| Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome? | Q31958293 | ||
| Genetic and transcriptomic analysis of transcription factor genes in the model halophilic Archaeon: coordinate action of TbpD and TfbA | Q33300157 | ||
| Transcription initiation in Archaea: facts, factors and future aspects | Q33592579 | ||
| Functional analysis of the three TATA binding protein homologs in Methanosarcina acetivorans | Q33705214 | ||
| The TBP-like factor: an alternative transcription factor in metazoa? | Q33724309 | ||
| Survey and summary: transcription by RNA polymerases I and III. | Q33787605 | ||
| Transcriptional activation in the context of repression mediated by archaeal histones | Q33859394 | ||
| Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution. | Q33875224 | ||
| Transcription in archaea: similarity to that in eucarya | Q34058138 | ||
| 25 years after the nucleosome model: chromatin modifications | Q34104537 | ||
| A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcription | Q34156990 | ||
| Mechanism and regulation of transcription in archaea | Q34205041 | ||
| Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae | Q34207143 | ||
| Bacterial RNA polymerase | Q34215835 | ||
| A fully recombinant system for activator-dependent archaeal transcription. | Q34358995 | ||
| Bacterial RNA polymerases: the wholo story | Q34531247 | ||
| Archaeal chromatin and transcription | Q34532838 | ||
| Structure and function of archaeal RNA polymerases. | Q34662819 | ||
| A Mediator-responsive form of metazoan RNA polymerase II. | Q34687021 | ||
| Heat shock response by the hyperthermophilic archaeon Pyrococcus furiosus | Q34993511 | ||
| Genome evolution at the genus level: comparison of three complete genomes of hyperthermophilic archaea | Q35034662 | ||
| The Lrp family of transcriptional regulators | Q35098855 | ||
| General transcription factor specified global gene regulation in archaea | Q35721656 | ||
| TFB1 or TFB2 is sufficient for Thermococcus kodakaraensis viability and for basal transcription in vitro | Q35758150 | ||
| Structure and mechanism of the RNA polymerase II transcription machinery | Q35758805 | ||
| Archaeal transcription and its regulators | Q36139379 | ||
| Archaeal transcriptional regulation--variation on a bacterial theme? | Q36152162 | ||
| Crystal structure of TBP-interacting protein (Tk-TIP26) and implications for its inhibition mechanism of the interaction between TBP and TATA-DNA. | Q36457993 | ||
| Dissection of the regulatory mechanism of a heat-shock responsive promoter in Haloarchaea: a new paradigm for general transcription factor directed archaeal gene regulation. | Q36676481 | ||
| Orientation of the transcription preinitiation complex in archaea | Q36698728 | ||
| The RNA polymerase II 15-kilodalton subunit is essential for viability in Drosophila melanogaster | Q36962226 | ||
| Archaeal RNA polymerase subunits E and F are not required for transcription in vitro, but a Thermococcus kodakarensis mutant lacking subunit F is temperature-sensitive | Q37080464 | ||
| Distinct roles of transcription factors TFIIIB and TFIIIC in RNA polymerase III transcription reinitiation. | Q37534473 | ||
| Archaeal RNA polymerase | Q37625517 | ||
| A Pyrococcus homolog of the leucine-responsive regulatory protein, LrpA, inhibits transcription by abrogating RNA polymerase recruitment | Q39530565 | ||
| Transcriptional regulation of the gene encoding an alcohol dehydrogenase in the archaeon Sulfolobus solfataricus involves multiple factors and control elements | Q39775193 | ||
| Transcription by Methanothermobacter thermautotrophicus RNA polymerase in vitro releases archaeal transcription factor B but not TATA-box binding protein from the template DNA. | Q39964550 | ||
| Structure of an archaeal RNA polymerase | Q40138210 | ||
| Putative tfIIs gene of Sulfolobus acidocaldarius encoding an archaeal transcription elongation factor is situated directly downstream of the gene for a small subunit of DNA-dependent RNA polymerase | Q40406937 | ||
| Photo-cross-linking of a purified preinitiation complex reveals central roles for the RNA polymerase II mobile clamp and TFIIE in initiation mechanisms. | Q40468992 | ||
| Proteomic analysis of an extreme halophilic archaeon, Halobacterium sp. NRC-1. | Q40573693 | ||
| Archaebacteria and eukaryotes possess DNA-dependent RNA polymerases of a common type | Q41459065 | ||
| A systems view of haloarchaeal strategies to withstand stress from transition metals | Q41626547 | ||
| Archaeal transcription: function of an alternative transcription factor B from Pyrococcus furiosus | Q41911712 | ||
| The archaeal TFIIEalpha homologue facilitates transcription initiation by enhancing TATA-box recognition | Q42246217 | ||
| Transcriptional regulation of an archaeal operon in vivo and in vitro | Q42482342 | ||
| The basal transcription factors TBP and TFB from the mesophilic archaeon Methanosarcina mazeii: structure and conformational changes upon interaction with stress-gene promoters | Q42505531 | ||
| Analysis of the open region and of DNA-protein contacts of archaeal RNA polymerase transcription complexes during transition from initiation to elongation | Q42600714 | ||
| Mutational studies of archaeal RNA polymerase and analysis of hybrid RNA polymerases | Q42608905 | ||
| Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3 (supplement). | Q43025500 | ||
| Histones and nucleosomes in Archaea and Eukarya: a comparative analysis | Q43025842 | ||
| Interaction of TIP26 from a hyperthermophilic archaeon with TFB/TBP/DNA ternary complex | Q43029070 | ||
| P433 | issue | 1 | |
| P304 | page(s) | 27-40 | |
| P577 | publication date | 2011-02-01 | |
| P1433 | published in | Critical Reviews in Biochemistry and Molecular Biology | Q5186661 |
| P1476 | title | Archaeal RNA polymerase and transcription regulation | |
| P478 | volume | 46 |
| Q38653377 | A review on comparative mechanistic studies of antimicrobial peptides against archaea. |
| Q52332039 | A transcriptional factor B paralog functions as an activator to DNA damage-responsive expression in archaea. |
| Q28710095 | ALOG domains: provenance of plant homeotic and developmental regulators from the DNA-binding domain of a novel class of DIRS1-type retroposons |
| Q31149419 | Activation of a chimeric Rpb5/RpoH subunit using library selection |
| Q36397710 | An archaeal protein evolutionarily conserved in prokaryotes is a zinc-dependent metalloprotease |
| Q38043849 | Basic mechanism of transcription by RNA polymerase II. |
| Q38645594 | Bypassing the Need for the Transcriptional Activator EarA through a Spontaneous Deletion in the BRE Portion of the fla Operon Promoter in Methanococcus maripaludis |
| Q42057814 | Conservation of promoter melting mechanisms in divergent regions of the single-subunit RNA polymerases |
| Q103804238 | Direct binding of TFEα opens DNA binding cleft of RNA polymerase |
| Q58794599 | Displacement of the transcription factor B reader domain during transcription initiation |
| Q42138804 | Effect of the environment on horizontal gene transfer between bacteria and archaea |
| Q33698578 | Eukaryotic and archaeal TBP and TFB/TF(II)B follow different promoter DNA bending pathways |
| Q22305604 | Fundamental issues related to the origin of melatonin and melatonin isomers during evolution: relation to their biological functions |
| Q43031339 | Gene regulation of two ferredoxin:NADP+ oxidoreductases by the redox-responsive regulator SurR in Thermococcus kodakarensis |
| Q36111396 | Genetic manipulation of Methanosarcina spp. |
| Q43173918 | Identification of the first transcriptional activator of an archaellum operon in a euryarchaeon |
| Q58716718 | Internal RNAs overlapping coding sequences can drive the production of alternative proteins in archaea |
| Q92461157 | Old cogs, new tricks: the evolution of gene expression in a chromatin context |
| Q47269538 | Phyletic distribution and lineage-specific domain architectures of archaeal two-component signal transduction systems |
| Q39342931 | Sub1/PC4, a multifaceted factor: from transcription to genome stability |
| Q55070232 | The Transcriptional Regulator TFB-RF1 Activates Transcription of a Putative ABC Transporter in Pyrococcus furiosus. |
| Q36311478 | The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration |
| Q37634489 | The [4Fe-4S] clusters of Rpo3 are key determinants in the post Rpo3/Rpo11 heterodimer formation of RNA polymerase in Methanosarcina acetivorans |
| Q39065329 | The application of powerful promoters to enhance gene expression in industrial microorganisms |
| Q35571747 | The initiation factor TFE and the elongation factor Spt4/5 compete for the RNAP clamp during transcription initiation and elongation |
| Q42357638 | Transcriptomes of the Extremely Thermoacidophilic Archaeon Metallosphaera sedula Exposed to Metal "Shock" Reveal Generic and Specific Metal Responses |
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