| scholarly article | Q13442814 |
| P8978 | DBLP publication ID | journals/bioinformatics/MouraSPLHC09 |
| P356 | DOI | 10.1093/BIOINFORMATICS/BTP105 |
| P8608 | Fatcat ID | release_anaybukhtjeolahodkwlt6g4qm |
| P698 | PubMed publication ID | 19228805 |
| P5875 | ResearchGate publication ID | 24026697 |
| P50 | author | Isabel Henriques | Q42275053 |
| António Correia | Q42275065 | ||
| Alexandra Moura | Q43168909 | ||
| P2093 | author name string | Mário Soares | |
| Carolina Pereira | |||
| Nuno Leitão | |||
| P2860 | cites work | ISfinder: the reference centre for bacterial insertion sequences | Q24538230 |
| Gapped BLAST and PSI-BLAST: a new generation of protein database search programs | Q24545170 | ||
| The emergence and fate of horizontally acquired genes in Escherichia coli | Q33327691 | ||
| The evolution of class 1 integrons and the rise of antibiotic resistance | Q33335636 | ||
| Pathogenicity islands: the tip of the iceberg | Q34288954 | ||
| Integrons: agents of bacterial evolution. | Q34569146 | ||
| ACLAME: a CLAssification of Mobile genetic Elements | Q34932251 | ||
| Studying plasmid horizontal transfer in situ: a critical review | Q36247073 | ||
| P433 | issue | 8 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | database | Q8513 |
| P304 | page(s) | 1096-1098 | |
| P577 | publication date | 2009-02-19 | |
| P1433 | published in | Bioinformatics | Q4914910 |
| P1476 | title | INTEGRALL: a database and search engine for integrons, integrases and gene cassettes | |
| P478 | volume | 25 |
| Q49577359 | A Practical Guide for Comparative Genomics of Mobile Genetic Elements in Prokaryotic Genomes |
| Q24644500 | ACLAME: a CLAssification of Mobile genetic Elements, update 2010 |
| Q89791461 | Abundance of mobile genetic elements in an Acinetobacter lwoffii strain isolated from Transylvanian honey sample |
| Q53601945 | Abundant rifampin resistance genes and significant correlations of antibiotic resistance genes and plasmids in various environments revealed by metagenomic analysis. |
| Q38497807 | Acquired metallo-β-lactamases and their genetic association with class 1 integrons and ISCR elements in Gram-negative bacteria |
| Q38077273 | An overview of the domestication and impact of the Salmonella mobilome |
| Q37874671 | Analysis of antibiotic resistance regions in Gram-negative bacteria |
| Q28481714 | Analysis of drug resistance determinants in Klebsiella pneumoniae isolates from a tertiary-care hospital in Beijing, China |
| Q35020408 | Antibiotic resistance and prevalence of class 1 and 2 integrons in Escherichia coli isolated from two wastewater treatment plants, and their receiving waters (Gulf of Gdansk, Baltic Sea, Poland). |
| Q58108379 | Antibiotics as both friends and foes of the human gut microbiome: The microbial community approach |
| Q64105163 | Antimicrobial Resistance Genes, Cassettes, and Plasmids Present in Associated With United States Food Animals |
| Q58559738 | Assessing transmission of antimicrobial resistant in wild giraffe contact networks |
| Q52372576 | Characteristics of Carbapenemase-Producing Enterobacteriaceae in Wastewater Revealed by Genomic Analysis. |
| Q42654284 | Characterization of Four Multidrug Resistance Plasmids Captured from the Sediments of an Urban Coastal Wetland |
| Q90265399 | Characterization of a NDM-1- Encoding Plasmid pHFK418-NDM From a Clinical Proteus mirabilis Isolate Harboring Two Novel Transposons, Tn6624 and Tn6625 |
| Q99711483 | Characterization of a Novel Chromosomal Class C β-Lactamase, YOC-1, and Comparative Genomics Analysis of a Multidrug Resistance Plasmid in Yokenella regensburgei W13 |
| Q54282335 | Characterization of antibiotic resistance in Escherichia coli isolated from shrimps and their environment. |
| Q48145646 | Characterization of the Complete Nucleotide Sequences of IncA/C2 Plasmids Carrying In809-Like Integrons from Enterobacteriaceae Isolates of Wildlife Origin |
| Q36921515 | Characterization of the variable region in the class 1 integron of antimicrobial-resistant Escherichia coli isolated from surface water |
| Q41557857 | Clonal spread of carbapenem non-susceptible Acinetobacter baumannii in an intensive care unit in a teaching hospital in China |
| Q37123068 | Clusters of Antibiotic Resistance Genes Enriched Together Stay Together in Swine Agriculture |
| Q40096717 | Co-occurrence of three different resistance plasmids in a multi-drug resistant Cronobacter sakazakii isolate causing neonatal infections |
| Q43168087 | Co-resistance to different classes of antibiotics among ESBL-producers from aquatic systems. |
| Q40048023 | Coexistence of two novel resistance plasmids, blaKPC-2-carrying p14057A and tetA(A) -carrying p14057B, in Pseudomonas aeruginosa |
| Q92416117 | Combining sequencing approaches to fully resolve a carbapenemase-encoding megaplasmid in a Pseudomonas shirazica clinical strain |
| Q57815882 | Comparative analysis of - and -carrying IncFII-family pKPC-LK30/pHN7A8 hybrid plasmids from CG258 strains disseminated among multiple Chinese hospitals |
| Q61810391 | Comparative analysis of KPC-2-encoding chimera plasmids with multi-replicon IncR:Inc:IncN1 or IncFII:Inc:IncN1 |
| Q90627974 | Comparative genomics analysis of Acinetobacter haemolyticus isolates from sputum samples of respiratory patients |
| Q58746895 | Comparative genomics of five different resistance plasmids coexisting in a clinical multi-drug resistant isolate |
| Q47346088 | Comparative genomics of type 1 IncC plasmids from China |
| Q59813007 | Complete Genome Sequence of -Positive sp. MRY16-398 Isolate From the Ascites of a Diverticulitis Patient |
| Q41249552 | Complete Genome Sequence of Achromobacter denitrificans PR1. |
| Q40911518 | Complete Genome Sequence of a Human-Invasive Salmonella enterica Serovar Typhimurium Strain of the Emerging Sequence Type 213 Harboring a Multidrug Resistance IncA/C Plasmid and a blaCMY-2-Carrying IncF Plasmid. |
| Q41554685 | Complete Genome Sequences of Four Extensively Drug-Resistant Pseudomonas aeruginosa Strains, Isolated from Adults with Ventilator-Associated Pneumonia at a Tertiary Referral Hospital in Mexico City |
| Q41578970 | Complete Genome Sequences of Two Pseudomonas aeruginosa Strains Isolated from Children with Bacteremia |
| Q35106024 | Complete nucleotide sequence of the IncN plasmid encoding IMP-6 and CTX-M-2 from emerging carbapenem-resistant Enterobacteriaceae in Japan |
| Q64930980 | Conserved phylogenetic distribution and limited antibiotic resistance of class 1 integrons revealed by assessing the bacterial genome and plasmid collection. |
| Q28079668 | Consolidating and Exploring Antibiotic Resistance Gene Data Resources |
| Q33500684 | Context-driven discovery of gene cassettes in mobile integrons using a computational grammar |
| Q93123239 | Deciphering extracellular antibiotic resistance genes (eARGs) in activated sludge by metagenome |
| Q36018611 | Detection and characterization of VIM-31, a new variant of VIM-2 with Tyr224His and His252Arg mutations, in a clinical isolate of Enterobacter cloacae. |
| Q47661889 | Detection of 224 candidate structured RNAs by comparative analysis of specific subsets of intergenic regions. |
| Q51136952 | Detection of the florfenicol resistance gene floR in Chryseobacterium isolates from rainbow trout. Exception to the general rule? |
| Q37727172 | Differences in Integron Cassette Excision Dynamics Shape a Trade-Off between Evolvability and Genetic Capacitance |
| Q47575117 | Discovery of the fourth mobile sulfonamide resistance gene. |
| Q101121025 | Dissemination of Verona Integron-encoded Metallo-β-lactamase among clinical and environmental Enterobacteriaceae isolates in Ontario, Canada |
| Q33575121 | Distinguishable epidemics of multidrug-resistant Salmonella Typhimurium DT104 in different hosts |
| Q36735017 | Diversification of broad host range plasmids correlates with the presence of antibiotic resistance genes |
| Q41713533 | Draft Genome Sequence of Klebsiella pneumoniae 704SK6, an OXA-48- and CTX-M-15-Encoding Wastewater Isolate |
| Q48307105 | Draft Genome Sequence of Singapore Klebsiella pneumoniae subsp. pneumoniae Isolate DS32358_14, Which Contains the Carbapenemase Gene blaVIM-1. |
| Q47686876 | Dynamic stepwise opening of integron attC DNA hairpins by SSB prevents toxicity and ensures functionality |
| Q37264392 | Efficiency of integron cassette insertion in correct orientation is ensured by the interplay of the three unpaired features of attC recombination sites. |
| Q64966788 | Enterobacter cloacae Complex Sequence Type 171 Isolates Expressing KPC-4 Carbapenemase Recovered from Canine Patients in Ohio. |
| Q46346609 | Evolution and comparative genomics of pAQU-like conjugative plasmids in Vibrio species |
| Q35806283 | Evolution of an incompatibility group IncA/C plasmid harboring blaCMY-16 and qnrA6 genes and its transfer through three clones of Providencia stuartii during a two-year outbreak in a Tunisian burn unit |
| Q98945043 | Evolution of antibiotic resistance at low antibiotic concentrations including selection below the minimal selective concentration |
| Q92188758 | Evolutionary Diversity of Prophage DNA in Klebsiella pneumoniae Chromosomes |
| Q89918152 | Exploring the resistome, virulome and microbiome of drinking water in environmental and clinical settings |
| Q97521331 | First Report on the Plasmidome From a High-Altitude Lake of the Andean Puna |
| Q101559471 | Free-floating extracellular DNA: Systematic profiling of mobile genetic elements and antibiotic resistance from wastewater |
| Q27674861 | GES-18, a New Carbapenem-Hydrolyzing GES-Type -Lactamase from Pseudomonas aeruginosa That Contains Ile80 and Ser170 Residues |
| Q41438047 | Gene Expression in Class 2 Integrons Is SOS-Independent and Involves Two Pc Promoters |
| Q37868656 | Gene flow, mobile genetic elements and the recruitment of antibiotic resistance genes into Gram-negative pathogens |
| Q64100639 | Genetic Characterization of a -Carrying IncP-7β Plasmid p1160-VIM and a -Harboring Integrative and Conjugative Element Tn From Clinical |
| Q40065735 | Genetic characterization of novel class 1 Integrons In0, In1069 and In1287 to In1290, and the inference of In1069-associated integron evolution in Enterobacteriaceae |
| Q40646501 | Genetic environment of the KPC gene in Acinetobacter baumannii ST2 clone from Puerto Rico and genomic insights into its drug resistance |
| Q40950597 | Genetic relatedness of commensal Escherichia coli from nursery pigs in intensive pig production in Denmark and molecular characterization of genetically different strains |
| Q90407933 | Genomic and Transcriptomic Evidence Supports Methane Metabolism in Archaeoglobi |
| Q33918513 | Genomic characterization of novel IncFII-type multidrug resistant plasmids p0716-KPC and p12181-KPC from Klebsiella pneumoniae. |
| Q38808071 | Genomics and the evolution of antibiotic resistance |
| Q36050344 | High Levels of Antibiotic Resistance Genes and Their Correlations with Bacterial Community and Mobile Genetic Elements in Pharmaceutical Wastewater Treatment Bioreactors |
| Q97905213 | High diversity and variability of pipolins among a wide range of pathogenic Escherichia coli strains |
| Q54985894 | Human Activity Determines the Presence of Integron-Associated and Antibiotic Resistance Genes in Southwestern British Columbia. |
| Q89537771 | Hybrid Genome Assembly and Annotation of a Pandrug-Resistant Klebsiella pneumoniae Strain Using Nanopore and Illumina Sequencing |
| Q41430529 | Identical miniature inverted repeat transposable elements flank class 1 integrons in clinical isolates of Acinetobacter spp. |
| Q42254255 | Identification and analysis of integrons and cassette arrays in bacterial genomes |
| Q46677721 | Identification of an integron containing the quinolone resistance gene qnrA1 in Shewanella xiamenensis |
| Q37834186 | Identification of beta-Lactamases and beta-Lactam-Related Proteins in Human Pathogenic Bacteria using a Computational Search Approach. |
| Q51151449 | Impact of wastewater treatment on the prevalence of integrons and genetic diversity of integron gene cassettes. |
| Q35589786 | Influence of a non-hospital medical care facility on antimicrobial resistance in wastewater |
| Q43029200 | Insertion sequences enrichment in extreme Red sea brine pool vent. |
| Q42604830 | Integron attI1 sites, not riboswitches, associate with antibiotic resistance genes |
| Q36618578 | Integrons: Vehicles and pathways for horizontal dissemination in bacteria. |
| Q33743517 | Integrons: past, present, and future. |
| Q92419542 | Linking the resistome and plasmidome to the microbiome |
| Q53790452 | Metagenomic Comparison of Antibiotic Resistance Genes Associated with Liquid and Dewatered Biosolids. |
| Q91398243 | Metagenomic analysis of β-lactamase and carbapenemase genes in the wastewater resistome |
| Q35071552 | Metagenomic analysis reveals significant changes of microbial compositions and protective functions during drinking water treatment |
| Q38688098 | Metagenomic analysis reveals wastewater treatment plants as hotspots of antibiotic resistance genes and mobile genetic elements. |
| Q64226652 | Metagenomic and Resistome Analysis of a Full-Scale Municipal Wastewater Treatment Plant in Singapore Containing Membrane Bioreactors |
| Q43350777 | Metagenomic insights into chlorination effects on microbial antibiotic resistance in drinking water |
| Q30999668 | Metagenomic insights into tetracycline effects on microbial community and antibiotic resistance of mouse gut. |
| Q35009233 | Metagenomic profiling of antibiotic resistance genes and mobile genetic elements in a tannery wastewater treatment plant |
| Q64983502 | Microevolution of antimicrobial resistance and biofilm formation of Salmonella Typhimurium during persistence on pig farms. |
| Q90697869 | Mobile Genetic Elements Associated with Antimicrobial Resistance |
| Q49854288 | Molecular Characteristics of First IMP-4-Producing Enterobacter cloacae Sequence Type 74 and 194 in Korea |
| Q47833109 | Molecular Characterization of Carbapenemase-Producing Pseudomonas aeruginosa of Czech Origin and Evidence for Clonal Spread of Extensively Resistant Sequence Type 357 Expressing IMP-7 Metallo-β-Lactamase. |
| Q35185499 | Molecular analysis of the integrons of metallo-β-lactamase-producing Pseudomonas aeruginosa isolates collected by nationwide surveillance programs across Japan |
| Q35602248 | Molecular characterization of a multidrug resistance IncF plasmid from the globally disseminated Escherichia coli ST131 clone |
| Q92590150 | Molecular characterization of blaKHM-1 encoding plasmid in an Enterobacter hormaechei subsp. hoffmannii isolate from blood culture |
| Q47229231 | Monitoring microevolution of OXA-48-producing Klebsiella pneumoniae ST147 in a hospital setting by SMRT sequencing |
| Q42933589 | Novel Class 1 Integrons in Multi-drug Resistant Isolates from Eastern China |
| Q90660666 | Novel IncR/IncP6 Hybrid Plasmid pCRE3-KPC Recovered from a Clinical KPC-2-Producing Citrobacter braakii Isolate |
| Q92132607 | Novel Mobilizable Genomic Island GEI-D18A Mediates Conjugational Transfer of Antibiotic Resistance Genes in the Multidrug-Resistant Strain Rheinheimera sp. D18 |
| Q40062674 | OXA-427, a new plasmid-borne carbapenem-hydrolysing class D β-lactamase in Enterobacteriaceae |
| Q92071579 | OXA-830, a Novel Chromosomally Encoded Extended-Spectrum Class D β-Lactamase in Aeromonas simiae |
| Q35519950 | Pan-genome dynamics of Pseudomonas gene complements enriched across hexachlorocyclohexane dumpsite |
| Q90597017 | Plasmid Dissemination and Selection of a Multidrug-Resistant Klebsiella pneumoniae Strain during Transplant-Associated Antibiotic Therapy |
| Q34053442 | Plasmid metagenome reveals high levels of antibiotic resistance genes and mobile genetic elements in activated sludge |
| Q92602528 | Population dynamics of an Escherichia coli ST131 lineage during recurrent urinary tract infection |
| Q92151893 | Potential KPC-2 carbapenemase reservoir of environmental Aeromonas hydrophila and Aeromonas caviae isolates from the effluent of an urban wastewater treatment plant in Japan |
| Q21135543 | Pyrosequencing of antibiotic-contaminated river sediments reveals high levels of resistance and gene transfer elements |
| Q34090820 | RAC: Repository of Antibiotic resistance Cassettes |
| Q30666548 | Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data. |
| Q61807085 | Replicon-Based Typing of IncI-Complex Plasmids, and Comparative Genomics Analysis of IncIγ/K1 Plasmids |
| Q91810461 | Research and Technological Advances Regarding the Study of the Spread of Antimicrobial Resistance Genes and Antimicrobial-Resistant Bacteria Related to Animal Husbandry |
| Q21132017 | Resistance determinants and mobile genetic elements of an NDM-1-encoding Klebsiella pneumoniae strain |
| Q55265556 | Resistome of carbapenem- and colistin-resistant Klebsiella pneumoniae clinical isolates. |
| Q61448782 | Sequencing and Genomic Diversity Analysis of IncHI5 Plasmids |
| Q37727483 | Sequencing of blaIMP-Carrying IncN2 Plasmids, and Comparative Genomics of IncN2 Plasmids Harboring Class 1 Integrons |
| Q40698271 | Sequencing of plasmids pAMBL1 and pAMBL2 from Pseudomonas aeruginosa reveals a blaVIM-1 amplification causing high-level carbapenem resistance |
| Q43344548 | Shift in antibiotic resistance gene profiles associated with nanosilver during wastewater treatment |
| Q36174574 | Stepwise evolution of pandrug-resistance in Klebsiella pneumoniae |
| Q28533900 | Structural diversity of class 1 integrons and their associated gene cassettes in Klebsiella pneumoniae isolates from a hospital in China |
| Q47448767 | Structural genomics of pNDM-BTR harboring In191 and Tn6360, and other bla NDM-carrying IncN1 plasmids |
| Q90636863 | Structural heterogeneity of attC integron recombination sites revealed by optical tweezers |
| Q34031593 | The contribution of Escherichia coli from human and animal sources to the integron gene pool in coastal waters |
| Q34557153 | The gain and loss of chromosomal integron systems in the Treponema species |
| Q30248484 | The importance of integrons for development and propagation of resistance in Shigella: the case of Latin America |
| Q35304479 | The influence of the accessory genome on bacterial pathogen evolution |
| Q60303685 | The plasmid-encoded transcription factor ArdK contributes to the repression of the IMP-6 metallo-β-lactamase gene blaIMP-6, leading to a carbapenem-susceptible phenotype in the blaIMP-6-positive Escherichia coli strain A56-1S |
| Q93264979 | The resistomes of six carbapenem-resistant pathogens - a critical genotype-phenotype analysis |
| Q28082442 | The role of biofilms as environmental reservoirs of antibiotic resistance |
| Q36242944 | The spread of bla OXA-48 and bla OXA-244 carbapenemase genes among Klebsiella pneumoniae, Proteus mirabilis and Enterobacter spp. isolated in Moscow, Russia |
| Q103027794 | The structural basis of promiscuity in small multidrug resistance transporters |
| Q58566802 | Therapeutic Potential of a New Jumbo Phage That Infects , a Widespread Coral Pathogen |
| Q43113427 | Transferable antibiotic resistance plasmids from biogas plant digestates often belong to the IncP-1ε subgroup |
| Q35867419 | Two novel class I integron arrays containing IMP-18 metallo-β-lactamase gene in Pseudomonas aeruginosa clinical isolates from Puerto Rico |
| Q91707699 | Type 1, 2, and 1/2-Hybrid IncC Plasmids From China |
| Q90267171 | Using Genomics to Track Global Antimicrobial Resistance |
| Q38376421 | VRprofile: gene-cluster-detection-based profiling of virulence and antibiotic resistance traits encoded within genome sequences of pathogenic bacteria. |
| Q92707802 | Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates |
| Q40594337 | Viruses-to-mobile genetic elements skew in the deep Atlantis II brine pool sediments. |
| Q40758595 | Whole-genome typing and characterization of blaVIM19-harbouring ST383 Klebsiella pneumoniae by PFGE, whole-genome mapping and WGS. |
| Q30489478 | Worldwide prevalence of class 2 integrases outside the clinical setting is associated with human impact |
| Q42319617 | attI1-Located Small Open Reading Frames ORF-17 and ORF-11 in a Class 1 Integron Affect Expression of a Gene Cassette Possessing a Canonical Shine-Dalgarno Sequence |
| Q40339642 | fosI Is a New Integron-Associated Gene Cassette Encoding Reduced Susceptibility to Fosfomycin |
| Q38643867 | p1220-CTXM, a pKP048-related IncFIIK plasmid carrying bla CTX-M-14 and qnrB4. |
| Q86519712 | pIMP-PH114 carrying bla IMP-4 in a Klebsiella pneumoniae strain is closely related to other multidrug-resistant IncA/C2 plasmids |
| Q49923877 | pSTM6-275, a Conjugative IncHI2 Plasmid of Salmonella enterica That Confers Antibiotic and Heavy-Metal Resistance under Changing Physiological Conditions |
| Q41991212 | pSY153-MDR, a p12969-DIM-related mega plasmid carrying blaIMP-45 and armA, from clinical Pseudomonas putida |
Search more.