scholarly article | Q13442814 |
P356 | DOI | 10.1111/TPJ.12252 |
P698 | PubMed publication ID | 23738527 |
P50 | author | R. George Ratcliffe | Q64785023 |
David A. Fell | Q42668859 | ||
P2093 | author name string | C Y Maurice Cheung | |
Lee J Sweetlove | |||
Thomas C R Williams | |||
Mark G Poolman | |||
P2860 | cites work | A genome-scale metabolic model of Arabidopsis and some of its properties | Q43276356 |
The metabolic flux phenotype of heterotrophic Arabidopsis cells reveals a complex response to changes in nitrogen supply | Q43406572 | ||
Multidimensional optimality of microbial metabolism | Q43431493 | ||
Subcellular flux analysis of central metabolism in a heterotrophic Arabidopsis cell suspension using steady-state stable isotope labeling | Q43445794 | ||
Monitoring flux through the oxidative pentose phosphate pathway using [1-14C]gluconate | Q44226501 | ||
A flux model of glycolysis and the oxidative pentosephosphate pathway in developing Brassica napus embryos | Q44448834 | ||
Molecular definition of the ascorbate-glutathione cycle in Arabidopsis mitochondria reveals dual targeting of antioxidant defenses in plants | Q44572767 | ||
Regulation of NAD- and NADP-dependent isocitrate dehydrogenases by reduction levels of pyridine nucleotides in mitochondria and cytosol of pea leaves | Q44594988 | ||
The energetics of Escherichia coli during aerobic growth in continuous culture | Q44679877 | ||
Increased pentose phosphate pathway flux after clinical traumatic brain injury: a [1,2-13C2]glucose labeling study in humans | Q46114375 | ||
Isotopic non-stationary 13C gluconate tracer method for accurate determination of the pentose phosphate pathway split-ratio in Penicillium chrysogenum | Q46539092 | ||
Two-phase resolution of polyploidy in the Arabidopsis metabolic network gives rise to relative and absolute dosage constraints | Q47301236 | ||
Detection of stoichiometric inconsistencies in biomolecular models | Q48326559 | ||
Metabolic network reconstruction and flux variability analysis of storage synthesis in developing oilseed rape (Brassica napus L.) embryos | Q51577942 | ||
A genome-scale metabolic model accurately predicts fluxes in central carbon metabolism under stress conditions. | Q51682302 | ||
Redox Transfer across the Inner Chloroplast Envelope Membrane | Q24522116 | ||
A protocol for generating a high-quality genome-scale metabolic reconstruction | Q24603373 | ||
Pulsing of membrane potential in individual mitochondria: a stress-induced mechanism to regulate respiratory bioenergetics in Arabidopsis | Q24633418 | ||
AraGEM, a genome-scale reconstruction of the primary metabolic network in Arabidopsis | Q24654215 | ||
Frontiers in metabolic reconstruction and modeling of plant genomes | Q27023985 | ||
The effects of alternate optimal solutions in constraint-based genome-scale metabolic models | Q29616019 | ||
Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli | Q30479887 | ||
Modelling metabolic CO2 evolution – a fresh perspective on respiration | Q30607382 | ||
Reconstruction and functional characterization of the human mitochondrial metabolic network based on proteomic and biochemical data | Q30939059 | ||
ScrumPy: metabolic modelling with Python | Q33258140 | ||
A multi-tissue type genome-scale metabolic network for analysis of whole-body systems physiology | Q34063123 | ||
The oxidative pentose phosphate pathway: structure and organisation | Q34533817 | ||
Energy use by biological protein transport pathways | Q35204590 | ||
Reconstruction of Arabidopsis metabolic network models accounting for subcellular compartmentalization and tissue-specificity | Q35657867 | ||
Proton-translocating transhydrogenase: an update of unsolved and controversial issues. | Q37313095 | ||
Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis. | Q37425274 | ||
Intracellular metabolite transporters in plants. | Q37663704 | ||
The biomass objective function | Q37739662 | ||
Flux-balance modeling of plant metabolism. | Q38014422 | ||
Are we ready for genome-scale modeling in plants? | Q38017425 | ||
Plant genome-scale metabolic reconstruction and modelling | Q38040572 | ||
The metabolic architecture of plant cells. Stability of central metabolism and flexibility of anabolic pathways during the growth cycle of tomato cells | Q38363031 | ||
SUBA: the Arabidopsis Subcellular Database. | Q39083220 | ||
The response of carbohydrate metabolism in potato tubers to low temperature | Q39214606 | ||
Characterization of a nicotinamide nucleotide transhydrogenase gene from the green alga Acetabularia acetabulum and comparison of its structure with those of the corresponding genes in mouse and Caenorhabditis elegans | Q42657355 | ||
P433 | issue | 6 | |
P304 | page(s) | 1050-1061 | |
P577 | publication date | 2013-08-06 | |
P1433 | published in | The Plant Journal | Q15766987 |
P1476 | title | A method for accounting for maintenance costs in flux balance analysis improves the prediction of plant cell metabolic phenotypes under stress conditions | |
P478 | volume | 75 |
Q58744208 | A Diel Flux Balance Model Captures Interactions between Light and Dark Metabolism during Day-Night Cycles in C3 and Crassulacean Acid Metabolism Leaves |
Q55550917 | A Dynamic Multi-Tissue Flux Balance Model Captures Carbon and Nitrogen Metabolism and Optimal Resource Partitioning During Arabidopsis Growth. |
Q85892601 | A Method of Accounting for Enzyme Costs in Flux Balance Analysis Reveals Alternative Pathways and Metabolite Stores in an Illuminated Arabidopsis Leaf |
Q40131995 | A curated genome-scale metabolic model of Bordetella pertussis metabolism. |
Q59789148 | A genome-scale metabolic model of potato late blight suggests a photosynthesis suppression mechanism |
Q39619867 | A genome-scale metabolic network reconstruction of tomato (Solanum lycopersicum L.) and its application to photorespiratory metabolism |
Q93083280 | A mass and charge balanced metabolic model of Setaria viridis revealed mechanisms of proton balancing in C4 plants |
Q38444677 | A state of the art of metabolic networks of unicellular microalgae and cyanobacteria for biofuel production. |
Q46317858 | A systems-wide understanding of photosynthetic acclimation in algae and higher plants |
Q57809307 | Advances in metabolic flux analysis toward genome-scale profiling of higher organisms |
Q28540866 | Analysis of isotopic labeling in peptide fragments by tandem mass spectrometry |
Q38609497 | Bioenergetics of Monoterpenoid Essential Oil Biosynthesis in Non-Photosynthetic Glandular Trichomes. |
Q46896512 | Bottom-up Metabolic Reconstruction of Arabidopsis and Its Application to Determining the Metabolic Costs of Enzyme Production. |
Q64231516 | Computational Approaches to Design and Test Plant Synthetic Metabolic Pathways |
Q87889323 | Computational analysis of the productivity potential of CAM |
Q66679640 | Current status and applications of genome-scale metabolic models |
Q27315964 | DRUM: a new framework for metabolic modeling under non-balanced growth. Application to the carbon metabolism of unicellular microalgae |
Q48892018 | Engineering central metabolism - a grand challenge for plant biologists |
Q40335134 | Finding the Subcellular Location of Barley, Wheat, Rice and Maize Proteins: The Compendium of Crop Proteins with Annotated Locations (cropPAL). |
Q42015891 | Flux Balance Analysis of Plant Metabolism: The Effect of Biomass Composition and Model Structure on Model Predictions |
Q46639912 | Flux balance analysis of genome-scale metabolic model of rice (Oryza sativa): aiming to increase biomass |
Q38336130 | Fluxes through plant metabolic networks: measurements, predictions, insights and challenges. |
Q38679523 | Green pathways: Metabolic network analysis of plant systems |
Q30832504 | Impact of warming and drought on carbon balance related to wood formation in black spruce |
Q36215959 | Impacts of high ATP supply from chloroplasts and mitochondria on the leaf metabolism of Arabidopsis thaliana |
Q36177644 | In silico metabolic network analysis of Arabidopsis leaves |
Q38961555 | Inference and Prediction of Metabolic Network Fluxes |
Q28652732 | Integrated network analysis and effective tools in plant systems biology. |
Q35905001 | Integration and Validation of the Genome-Scale Metabolic Models of Pichia pastoris: A Comprehensive Update of Protein Glycosylation Pathways, Lipid and Energy Metabolism |
Q34741381 | Integration of a constraint-based metabolic model of Brassica napus developing seeds with (13)C-metabolic flux analysis |
Q90381590 | Limitations of Deuterium-Labelled Substrates for Quantifying NADPH Metabolism in Heterotrophic Arabidopsis Cell Cultures |
Q27320496 | Metabolic Architecture of the Cereal Grain and Its Relevance to Maximize Carbon Use Efficiency |
Q39020207 | Metabolic network modeling with model organisms |
Q42091044 | Metabolic trade-offs between biomass synthesis and photosynthate export at different light intensities in a genome-scale metabolic model of rice. |
Q87218797 | Multiscale metabolic modeling: dynamic flux balance analysis on a whole-plant scale |
Q39164374 | Non-enzymatic molecular damage as a prototypic driver of aging |
Q26852422 | Plant metabolic modeling: achieving new insight into metabolism and metabolic engineering |
Q38283539 | Predictive sulfur metabolism - a field in flux |
Q51706782 | Proteins with high turnover rate in barley leaves estimated by proteome analysis combined with in planta isotope labeling |
Q35587018 | Quantifying protein synthesis and degradation in Arabidopsis by dynamic 13CO2 labeling and analysis of enrichment in individual amino acids in their free pools and in protein |
Q99594982 | Reconstructing organisms in silico: genome-scale models and their emerging applications |
Q51718562 | Relationship between starch degradation and carbon demand for maintenance and growth in Arabidopsis thaliana in different irradiance and temperature regimes |
Q39175495 | Respiration climacteric in tomato fruits elucidated by constraint-based modelling |
Q31145464 | SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations. |
Q58730925 | The intertwined metabolism during symbiotic nitrogen fixation elucidated by metabolic modelling |
Q53289384 | The metabolic flux phenotype of heterotrophic Arabidopsis cells reveals a flexible balance between the cytosolic and plastidic contributions to carbohydrate oxidation in response to phosphate limitation. |
Q28817802 | Towards improved genome-scale metabolic network reconstructions: unification, transcript specificity and beyond |
Search more.