Insertion sequence-driven evolution of Escherichia coli in chemostats.

scientific article

Insertion sequence-driven evolution of Escherichia coli in chemostats. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1007/S00239-011-9439-2
P698PubMed publication ID21399911

P50authorJoel GafféQ54652712
P2093author name stringDominique Schneider
Evelyne Coursange
Ram P Maharjan
Christopher McKenzie
Tom Ferenci
P2860cites workTransposable elements as mutator genes in evolutionQ59084250
The evolutionary dynamics of repetitive DNA in eukaryotesQ59090793
IS1 is involved in deletion formation in the gal region of E. coli K12Q66900379
The early stage of bacterial genome-reductive evolution in the hostQ21131555
Mathematical model for studying genetic variation in terms of restriction endonucleasesQ24564849
Evolution of penicillin-binding protein 2 concentration and cell shape during a long-term experiment with Escherichia coliQ24644443
Genomic comparisons among Escherichia coli strains B, K-12, and O157:H7 using IS elements as molecular markersQ24797871
The neighbor-joining method: a new method for reconstructing phylogenetic treesQ25939010
The complete genome sequence of Escherichia coli K-12Q27860542
Fast growth increases the selective advantage of a mutation arising recurrently during evolution under metal limitationQ28476065
Insertion sequencesQ29617579
Insertion sequence-related genetic variation in resting Escherichia coli K-12.Q30011213
Clonal adaptive radiation in a constant environmentQ33249164
Insertion Sequences show diverse recent activities in Cyanobacteria and ArchaeaQ33316381
A novel mechanism of transposon-mediated gene activationQ33510907
Irradiation-induced Deinococcus radiodurans genome fragmentation triggers transposition of a single resident insertion sequenceQ33525568
ISbrowser: an extension of ISfinder for visualizing insertion sequences in prokaryotic genomesQ33600564
Regulation by nutrient limitationQ33632456
Periodic selection in Escherichia coliQ33711273
Distribution and abundance of insertion sequences among natural isolates of Escherichia coli.Q33952758
Mechanisms causing rapid and parallel losses of ribose catabolism in evolving populations of Escherichia coli B.Q34011353
Genomic identification of a novel mutation in hfq that provides multiple benefits in evolving glucose-limited populations of Escherichia coli.Q34119146
Escherichia coli starvation diets: essential nutrients weigh in distinctlyQ34124406
Evolution of high mutation rates in experimental populations of E. coliQ34429727
Regulation of mutY and nature of mutator mutations in Escherichia coli populations under nutrient limitationQ34434306
Optimality and evolutionary tuning of the expression level of a proteinQ34437723
Recent insights into the general stress response regulatory network in Escherichia coli.Q34586751
Long-term experimental evolution in Escherichia coli. IX. Characterization of insertion sequence-mediated mutations and rearrangementsQ34610582
Experimental analysis of molecular events during mutational periodic selections in bacterial evolution.Q34611032
Genetic architecture of thermal adaptation in Escherichia coliQ34614487
Bacterial evolution through the selective loss of beneficial Genes. Trade-offs in expression involving two loci.Q34618065
Inversions over the terminus region in Salmonella and Escherichia coli: IS200s as the sites of homologous recombination inverting the chromosome of Salmonella enterica serovar typhiQ34840859
Parallel changes in global protein profiles during long-term experimental evolution in Escherichia coliQ35038412
Genomic evolution during a 10,000-generation experiment with bacteriaQ36451882
Insertion sequences in prokaryotic genomesQ36578722
Transposable modules generated by a single copy of insertion sequence ISPme1 and their influence on structure and evolution of natural plasmids of Paracoccus methylutens DM12.Q36594561
Transposition of an insertion sequence, ISTth7, in the genome of the extreme thermophile Thermus thermophilus HB8.Q36814069
Intense transpositional activity of insertion sequences in an ancient obligate endosymbiont.Q36836683
Genetic basis of evolutionary adaptation by Escherichia coli to stressful cycles of freezing, thawing and growthQ36873735
Bacterial physiology, regulation and mutational adaptation in a chemostat environmentQ36913761
The spread of a beneficial mutation in experimental bacterial populations: the influence of the environment and genotype on the fixation of rpoS mutationsQ37029909
Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12Q37232509
Clonal expansion of a globally disseminated lineage of Mycobacterium tuberculosis with low IS6110 copy numbers.Q37702404
Comparison of Francisella tularensis genomes reveals evolutionary events associated with the emergence of human pathogenic strains.Q38606114
An Escherichia coli plasmid-based, mutational system in which supF mutants are selectable: insertion elements dominate the spontaneous spectraQ39100270
Spectra of spontaneous growth-dependent and adaptive mutations at ebgR.Q39494235
Oxygen-insensitive nitroreductases: analysis of the roles of nfsA and nfsB in development of resistance to 5-nitrofuran derivatives in Escherichia coli.Q39568272
Precise excision of IS5 from the intergenic region between the fucPIK and the fucAO operons and mutational control of fucPIK operon expression in Escherichia coliQ39608252
glc locus of Escherichia coli: characterization of genes encoding the subunits of glycolate oxidase and the glc regulator proteinQ39840883
Transposable elements and adaptation of host bacteriaQ40564752
A novel insertion sequence element, IS Yen2, as an epidemiological marker for weakly pathogenic bioserotypes of Yersinia enterocoliticaQ41457096
Insertion-sequence-mediated mutations isolated during adaptation to growth and starvation in Lactococcus lactisQ41992183
A novel insertion sequence derepresses efflux pump expression and preadapts Pseudomonas putida S12 for extreme solvent stressQ42037370
IS103, a new insertion element in Escherichia coli: characterization and distribution in natural populationsQ42101135
Divergence involving global regulatory gene mutations in an Escherichia coli population evolving under phosphate limitationQ42334282
The effect of mobile element IS10 on experimental regulatory evolution in Escherichia coliQ42533037
UV light induces IS10 transposition in Escherichia coli.Q42571999
Divergence and redundancy of transport and metabolic rate-yield strategies in a single Escherichia coli populationQ42738443
Crucial role for insertion sequence elements in Lactobacillus helveticus evolution as revealed by interstrain genomic comparison.Q42920850
Oxidative stress of Burkholderia cenocepacia induces insertion sequence-mediated genomic rearrangements that interfere with macrorestriction-based genotypingQ42929583
Contribution of gene amplification to evolution of increased antibiotic resistance in Salmonella typhimuriumQ43067316
The generation of multiple co-existing mal-regulatory mutations through polygenic evolution in glucose-limited populations of Escherichia coliQ44935797
Genome sequences of Escherichia coli B strains REL606 and BL21(DE3).Q45331719
Spontaneous mutators in bacteria: insights into pathways of mutagenesis and repairQ46617407
High mutation frequencies among Escherichia coli and Salmonella pathogensQ48057867
IS2, a genetic element for turn-off and turn-on of gene activity in E. coli.Q53864235
The fate of competing beneficial mutations in an asexual population.Q54262235
The influence of cellular physiology on the initiation of mutational pathways inEscherichia colipopulationsQ54525605
DNA sequence changes in mutations in the tonB gene on the chromosome of Escherichia coli K12: insertion elements dominate the spontaneous spectra.Q54617924
Repeated evolution of an acetate-crossfeeding polymorphism in long-term populations of Escherichia coliQ58870925
Insertion of DNA activates the cryptic bgl operon in E. coli K12Q59067572
P433issue4
P921main subjectEscherichia coliQ25419
P304page(s)398-412
P577publication date2011-03-12
P1433published inJournal of Molecular EvolutionQ6295595
P1476titleInsertion sequence-driven evolution of Escherichia coli in chemostats
P478volume72

Reverse relations

cites work (P2860)
Q34791987A case of adaptation through a mutation in a tandem duplication during experimental evolution in Escherichia coli
Q36596823Adaptation to Parasites and Costs of Parasite Resistance in Mutator and Nonmutator Bacteria
Q34433445Analysis of the Lactobacillus casei supragenome and its influence in species evolution and lifestyle adaptation
Q46414822CHO Cells adapted to inorganic phosphate limitation show higher growth and higher pyruvate carboxylase flux in phosphate replete conditions.
Q26825267Culture history and population heterogeneity as determinants of bacterial adaptation: the adaptomics of a single environmental transition
Q38196754DnaA dynamics could be linked with fitness cost in bacteria
Q38403177Dynamics and genetic diversification of Escherichia coli during experimental adaptation to an anaerobic environment
Q35874389Dynamics of bacterial insertion sequences: can transposition bursts help the elements persist?
Q39013989Environment-directed activation of the Escherichia coliflhDC operon by transposons
Q42221978Evidence that the insertion events of IS2 transposition are biased towards abrupt compositional shifts in target DNA and modulated by a diverse set of culture parameters
Q64274021Evolutionary Changes after Translational Challenges Imposed by Horizontal Gene Transfer
Q57174769Experimental Design, Population Dynamics, and Diversity in Microbial Experimental Evolution
Q58572641Exploring the rearrangement of sensory intelligence in proteobacteria: insight of Pho regulon
Q89724857Genome rearrangements and megaplasmid loss in the filamentous bacterium Kitasatospora viridifaciens are associated with protoplast formation and regeneration
Q64448239Insertion sequences drive the emergence of a highly adapted human pathogen
Q89047564Instability of the 16S rRNA methyltransferase-encoding npmA gene: why have bacterial cells possessing npmA not spread despite their high and broad resistance to aminoglycosides?
Q34237811Large chromosomal rearrangements during a long-term evolution experiment with Escherichia coli
Q36590556Mutation accumulation and fitness in mutator subpopulations of Escherichia coli
Q37997288New insights into bacterial adaptation through in vivo and in silico experimental evolution
Q37689696Quantitative assessment of insertion sequence impact on bacterial genome architecture
Q42933254Regulation of solvent tolerance in Pseudomonas putida S12 mediated by mobile elements.
Q35149028Simple phenotypic sweeps hide complex genetic changes in populations
Q28235419The first steps of adaptation of Escherichia coli to the gut are dominated by soft sweeps
Q28649903The functional basis of adaptive evolution in chemostats
Q39240966The impact of insertion sequences on bacterial genome plasticity and adaptability.
Q38072072The impact of transposable elements in environmental adaptation.
Q36245287The multiplicity of divergence mechanisms in a single evolving population
Q41357789Transposable Elements Mediate Adaptive Debilitation of Flagella in Experimental Escherichia coli Populations

Search more.