Transcriptional profiling of swine mammary gland during the transition from colostrogenesis to lactogenesis using RNA sequencing.

scientific article

Transcriptional profiling of swine mammary gland during the transition from colostrogenesis to lactogenesis using RNA sequencing. is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1103781698
P356DOI10.1186/S12864-018-4719-5
P932PMC publication ID5934875
P698PubMed publication ID29724161

P50authorMariasilvia D'AndreaQ60652341
Khuram ShahzadQ87185086
Valentino PalomboQ91651670
Juan J. LoorQ38639591
P2093author name stringP K Theil
U Krogh
M Vailati-Riboni
P2860cites workThe subcellular localization of acetyl-CoA carboxylase 2Q22253198
Defective LPS Signaling in C3H/HeJ and C57BL/10ScCr Mice: Mutations in Tlr4 GeneQ22299417
IRF7: activation, regulation, modification and functionQ24299740
Structure and expression of a human oxytocin receptorQ24336185
Lipopolysaccharide-binding protein and phospholipid transfer protein release lipopolysaccharides from gram-negative bacterial membranesQ24548769
A scaling normalization method for differential expression analysis of RNA-seq dataQ24628783
Overexpression of Insig-1 in the livers of transgenic mice inhibits SREBP processing and reduces insulin-stimulated lipogenesisQ24631468
Involution of the mouse mammary gland is associated with an immune cascade and an acute-phase response, involving LBP, CD14 and STAT3Q24794211
Amino acids and mammary gland development: nutritional implications for milk production and neonatal growthQ26752741
alpha-Lactalbumin (LA) stimulates milk beta-1,4-galactosyltransferase I (beta 4Gal-T1) to transfer glucose from UDP-glucose to N-acetylglucosamine. Crystal structure of beta 4Gal-T1 x LA complex with UDP-GlcQ27633866
Transcription factors of the NFAT family: regulation and functionQ28237645
The cytochrome P450 4 (CYP4) familyQ28305817
Regulation of hepatic lipogenesis by the transcription factor XBP1Q28507784
Bovine milk proteome in the first 9 days: protein interactions in maturation of the immune and digestive system of the newbornQ28543478
Molecular characterization and expression of rat acyl-CoA synthetase 3Q28572091
Synthesis of long-chain polyunsaturated fatty acids in lactating mammary gland: role of Delta5 and Delta6 desaturases, SREBP-1, PPARalpha, and PGC-1Q28576083
Expression of hexokinase 1 and hexokinase 2 in mammary tissue of nonlactating and lactating rats: evaluation by RT-PCRQ28584259
The small chromatin-binding protein p8 coordinates the association of anti-proliferative and pro-myogenic proteins at the myogenin promoterQ28585014
RNA Sequencing and AnalysisQ28602964
Transcriptome-Wide Analysis Reveals the Role of PPARγ Controlling the Lipid Metabolism in Goat Mammary Epithelial CellsQ28820990
Blinded by the Light: The Growing Complexity of p53Q29547590
Count-based differential expression analysis of RNA sequencing data using R and BioconductorQ29577114
The unfolded protein response: controlling cell fate decisions under ER stress and beyondQ29615499
Protein sensors for membrane sterolsQ29617313
Neutrophils and immunity: challenges and opportunitiesQ29617616
limma powers differential expression analyses for RNA-sequencing and microarray studiesQ29617988
Mechanistic model to predict colostrum intake based on deuterium oxide dilution technique data and impact of gestation and prefarrowing diets on piglet intake and sow yield of colostrum.Q30867254
Bovine mammary gene expression profiling during the onset of lactationQ31130773
The porcine taurochenodeoxycholic acid 6alpha-hydroxylase (CYP4A21) gene: evolution by gene duplication and gene conversionQ42112535
Elevated milk soluble CD14 in bovine mammary glands challenged with Escherichia coli lipopolysaccharideQ42445782
Synthesis of lactoferrin and transport of transferrin in the lactating mammary gland of sheepQ42460971
Transcriptomic analysis reveals key regulators of mammogenesis and the pregnancy-lactation cycleQ42774682
Coordinate regulation of phospholipid biosynthesis and secretory pathway gene expression in XBP-1(S)-induced endoplasmic reticulum biogenesis.Q42832143
Bioinformatics and Gene Network Analyses of the Swine Mammary Gland Transcriptome during Late Gestation.Q43067642
Peroxisome proliferator-activated receptor-gamma activation and long-chain fatty acids alter lipogenic gene networks in bovine mammary epithelial cells to various extentsQ43287580
Mice heterozygous for the xanthine oxidoreductase gene facilitate lipid accumulation in adipocytesQ43768654
The influence of nonspecific immunostimulation of pregnant sows on the immunological value of colostrumQ44019472
A study of L-leucine, L-phenylalanine and L-alanine transport in the perfused rat mammary gland: possible involvement of LAT1 and LAT2.Q44052408
Endoplasmic reticulum lumenal proteins of rat mammary gland. Potential involvement in lipid droplet assembly during lactationQ45087520
Hormones, IgG and lactose changes around parturition in plasma, and colostrum or saliva of multiparous sows.Q45145303
Human milk, leukocytes, and immunityQ45217533
Metabolic regulation in the lactating mammary gland: a lipid synthesizing machine.Q47313889
The transfer of immunoglobins IgG, IgA and IgM from serum to colostrum and milk in the sow.Q48015408
Molecular characterisation and hormone-dependent expression of the porcine whey acidic protein geneQ48039425
Assignment of the mitochondrial glycerol-3-phosphate acyltransferase (GPAT) gene to porcine chromosome 14.Q48226694
Role of suckling in regulating cell turnover and onset and maintenance of lactation in individual mammary glands of sows.Q50109338
Forty years of cytochrome P450.Q50655017
Impact of fat source and dietary fibers on feed intake, plasma metabolites, litter gain and the yield and composition of milk in sows.Q51294559
The coagulation system and its function in early immune defense.Q53059508
Participation of mammary gland in long-chain polyunsaturated fatty acid synthesis during pregnancy and lactation in rats.Q54389503
mRNA abundance and expression of SLC27A, ACC, SCD, FADS, LPIN, INSIG, and PPARGC1 gene isoforms in mouse mammary glands during the lactation cycle.Q54421186
The chemokine CXCL3 is responsible for the constitutive chemotactic activity of bovine milk for neutrophils.Q54522710
Internal controls for quantitative polymerase chain reaction of swine mammary glands during pregnancy and lactation.Q54523096
Expression of the neonatal Fc receptor (FcRn) in the bovine mammary gland.Q54641401
Stearyl CoA as a precursor of oleic acid and glycerolipids in mammary microsomes from lactating bovine: possible regulatory step in milk triglyceride synthesisQ68643596
Changes in alpha-lactalbumin, total lactose, UDP-galactose hydrolase and other factors in tammar wallaby (Macropus eugenii) milk during lactationQ69855123
Immunoglobulin production and transport by the mammary glandQ70648844
Prolactin Regulation of Cytological Differentiation of Mammary Epithelial Cells in Periparturient Cows*Q70792603
The importance of colostral immunoglobulins and their absorption from the intestine of the newborn animalsQ71215099
Mammary epithelial cells undergo secretory differentiation in cycling virgins but require pregnancy for the establishment of terminal differentiationQ71957674
Nucleic acid, metabolic and histological changes in gilt mammary tissue during pregnancy and lactogenesisQ72673705
Regulation of the immunoglobulin G1 receptor: effect of prolactin on in vivo expression of the bovine mammary immunoglobulin G1 receptorQ73014693
C3/C4 concentration ratio reverses between colostrum and mature milk in human lactationQ73117768
Localization of the sheep FcRn in the mammary glandQ74319105
Genetic variants of the FADS1 FADS2 gene cluster are associated with altered (n-6) and (n-3) essential fatty acids in plasma and erythrocyte phospholipids in women during pregnancy and in breast milk during lactationQ79659240
Over-expression of the bovine FcRn in the mammary gland results in increased IgG levels in both milk and serum of transgenic miceQ80562936
Expression of genes involved in regulation of cell turnover during milk stasis and lactation rescue in sow mammary glandsQ81208647
ACSL1, AGPAT6, FABP3, LPIN1, and SLC27A6 are the most abundant isoforms in bovine mammary tissue and their expression is affected by stage of lactationQ81311157
Characterization of mammary gland development in pregnant giltsQ82554573
Transcript abundance of amino acid transporters, β-casein, and α-lactalbumin in mammary tissue of periparturient, lactating, and postweaned sowsQ84432699
In-depth analysis of low abundant proteins in bovine colostrum using different fractionation techniquesQ84678855
Cholesterol metabolism, transport, and hepatic regulation in dairy cows during transition and early lactationQ88127549
Mammary nutrient uptake in multiparous sows fed supplementary arginine during gestation and lactationQ88563345
Cloning and expression of a pig liver taurochenodeoxycholic acid 6alpha-hydroxylase (CYP4A21): a novel member of the CYP4A subfamilyQ31671741
Anti-oxidative properties of fluvastatin, an HMG-CoA reductase inhibitor, contribute to prevention of atherosclerosis in cholesterol-fed rabbitsQ31798151
Gene networks driving bovine milk fat synthesis during the lactation cycleQ33356782
Identification in milk of a serum amyloid A peptide chemoattractant for B lymphoblasts.Q33402646
Osteopontin: an early innate immune marker of Escherichia coli mastitis harbors genetic polymorphisms with possible links with resistance to mastitisQ33504891
Regulation of Triglyceride Metabolism. II. Function of mitochondrial GPAT1 in the regulation of triacylglycerol biosynthesis and insulin actionQ33641569
Identification of a novel sn-glycerol-3-phosphate acyltransferase isoform, GPAT4, as the enzyme deficient in Agpat6-/- mice.Q33642258
voom: Precision weights unlock linear model analysis tools for RNA-seq read countsQ33741687
Microsomal cytochrome P450 and eicosanoid metabolismQ33781283
Comparative Approach of the de novo Fatty Acid Synthesis (Lipogenesis) between Ruminant and Non Ruminant Mammalian Species: From Biochemical Level to the Main Regulatory Lipogenic GenesQ33886971
Transfer of maternal cytokines to suckling piglets: in vivo and in vitro models with implications for immunomodulation of neonatal immunity.Q33889389
Enzymes of triacylglycerol synthesis and their regulationQ33974340
Transfer of maternal haptoglobin to suckling pigletsQ34008183
Mammary gland immunology and neonate protection in pigs. Homing of lymphocytes into the MG.Q34014116
Immune components in porcine mammary secretionsQ34052193
The structure and functions of human lysophosphatidic acid acyltransferasesQ34085934
Transcriptional profiling of bovine milk using RNA sequencingQ34140882
A novel dynamic impact approach (DIA) for functional analysis of time-course omics studies: validation using the bovine mammary transcriptomeQ34206063
Perspectives on immunoglobulins in colostrum and milkQ34247980
Role of transcription factor NFAT in the immune responseQ34281364
Transcriptional regulation of metabolismQ34511703
Soluble CD14 enriched in colostrum and milk induces B cell growth and differentiationQ34621151
LAG1 puts the focus on ceramide signalingQ34801761
Placental accommodations for transport and metabolism during intra-uterine crowding in pigsQ35559131
Soluble form of ICAM-1, VCAM-1, E- and L-selectin in human milkQ35609685
Key stages in mammary gland development. Secretory activation in the mammary gland: it's not just about milk protein synthesis!Q35749416
Leucine and histidine independently regulate milk protein synthesis in bovine mammary epithelial cells via mTOR signaling pathwayQ35753797
The central role of perilipin a in lipid metabolism and adipocyte lipolysisQ35951062
Gene regulation of UDP-galactose synthesis and transport: potential rate-limiting processes in initiation of milk production in humans.Q36176001
RNA-Sequencing for profiling goat milk transcriptome in colostrum and mature milkQ36203609
Mouse lipin-1 and lipin-2 cooperate to maintain glycerolipid homeostasis in liver and aging cerebellum.Q36236228
The stress signalling pathway nuclear factor E2-related factor 2 is activated in the liver of sows during lactationQ36412592
Innate immunity of the bovine mammary glandQ36447695
Protein-mediated fatty acid uptake: novel insights from in vivo modelsQ36547053
IRE1α-XBP1s induces PDI expression to increase MTP activity for hepatic VLDL assembly and lipid homeostasisQ36600595
Genetic and functional confirmation of the causality of the DGAT1 K232A quantitative trait nucleotide in affecting milk yield and compositionQ36602063
PPAR γ Regulates Genes Involved in Triacylglycerol Synthesis and Secretion in Mammary Gland Epithelial Cells of Dairy GoatsQ36844986
Immune components of colostrum and milk--a historical perspectiveQ36997220
Regulation of lipid synthesis genes and milk fat production in human mammary epithelial cells during secretory activationQ37142463
Biochemistry, physiology, and genetics of GPAT, AGPAT, and lipin enzymes in triglyceride synthesisQ37216748
Neutrophils as one of the major haptoglobin sources in mastitis affected milkQ37224077
Membrane phospholipid synthesis and endoplasmic reticulum functionQ37308781
Immune components of bovine colostrum and milkQ37308839
Human BDH2, an anti-apoptosis factor, is a novel poor prognostic factor for de novo cytogenetically normal acute myeloid leukemiaQ37351908
The XBP1 Arm of the Unfolded Protein Response Induces Fibrogenic Activity in Hepatic Stellate Cells Through AutophagyQ37519318
Lipin-1 and lipin-3 together determine adiposity in vivoQ37636439
TP53 supports basal-like differentiation of mammary epithelial cells by preventing translocation of deltaNp63 into nucleoli.Q37697855
The unfolded protein response in secretory cell function.Q38039150
The functional and molecular entities underlying amino acid and peptide transport by the mammary gland under different physiological and pathological conditionsQ38155424
Neonatal piglet survival: impact of sow nutrition around parturition on fetal glycogen deposition and production and composition of colostrum and transient milkQ38206903
Biosynthesis of milk fat, protein, and lactose: roles of transcriptional and posttranscriptional regulationQ38294157
XBP1 Regulates the Biosynthetic Capacity of the Mammary Gland During Lactation by Controlling Epithelial Expansion and Endoplasmic Reticulum Formation.Q38295344
Veterinary Medicine and Omics (Veterinomics): Metabolic Transition of Milk Triacylglycerol Synthesis in Sows from Late Pregnancy to LactationQ38456126
Transcriptome analysis of the mammary gland from GH transgenic goats during involutionQ38464694
Human Milk Components Modulate Toll-Like Receptor-Mediated InflammationQ38698319
Genetic variations in the SPP1 promoter affect gene expression and the level of osteopontin secretion into bovine milkQ38981640
Acyl specificity in triglyceride synthesis by lactating rat mammary glandQ39122555
Comprehensive RNA-Seq profiling to evaluate lactating sheep mammary gland transcriptomeQ39632589
Lipopolysaccharide-binding protein-mediated Toll-like receptor 4 dimerization enables rapid signal transduction against lipopolysaccharide stimulation on membrane-associated CD14-expressing cellsQ39743477
A functional genomics approach to evaluate candidate genes located in a QTL interval for milk production traits on BTA6.Q39984959
Physiological roles of ketone bodies as substrates and signals in mammalian tissuesQ40280929
Body condition score and plane of nutrition prepartum affect adipose tissue transcriptome regulators of metabolism and inflammation in grazing dairy cows during the transition periodQ40281177
Soluble forms of Toll-like receptor (TLR)2 capable of modulating TLR2 signaling are present in human plasma and breast milkQ40609296
ATP-independent fatty acyl-coenzyme A synthesis from phospholipid: coenzyme A-dependent transacylation activity toward lysophosphatidic acid catalyzed by acyl-coenzyme A:lysophosphatidic acid acyltransferase.Q40806193
Targeted inhibition of osteopontin expression in the mammary gland causes abnormal morphogenesis and lactation deficiencyQ40907690
The role of p53 in cell cycle regulationQ41176248
Studies on the mode of uptake of blood triglycerides by the mammary gland of the lactating goat. The uptake and incorporation into milk fat and mammary lymph of labelled glycerol, fatty acids and triglyceridesQ41515522
Milk ceruloplasmin and its expression by mammary gland and liver in pigsQ41712038
Ruminant metabolic systems biology: reconstruction and integration of transcriptome dynamics underlying functional responses of tissues to nutrition and physiological state.Q42020739
P4510describes a project that useslimmaQ112236343
edgeRQ113334690
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)322
P577publication date2018-05-03
P1433published inBMC GenomicsQ15765854
P1476titleTranscriptional profiling of swine mammary gland during the transition from colostrogenesis to lactogenesis using RNA sequencing.
P478volume19

Reverse relations

cites work (P2860)
Q97526776Current Evidences and Future Perspectives for AMPK in the Regulation of Milk Production and Mammary Gland Biology
Q57471320Mammary metabolism and colostrogenesis in sows during late gestation and the colostral period
Q58120302Recent progress of porcine milk components and mammary gland function
Q91683630Review: nutritional and endocrine control of colostrogenesis in swine
Q99415054Understanding seasonal weight loss tolerance in dairy goats: a transcriptomics approach

Search more.