| human | Q5 |
| P2456 | DBLP author ID | 140/4798 |
| P496 | ORCID iD | 0000-0003-2900-098X |
| P1153 | Scopus author ID | 7103199681 |
| P108 | employer | University of Oxford | Q34433 |
| University of Cambridge | Q35794 | ||
| Max Planck Institute for Biophysics | Q255876 | ||
| Bioinformatics Institute | Q30281672 | ||
| P734 | family name | Bond | Q15789303 |
| Bond | Q15789303 | ||
| Bond | Q15789303 | ||
| P735 | given name | Peter | Q2793400 |
| Peter | Q2793400 | ||
| John | Q4925477 | ||
| John | Q4925477 | ||
| P106 | occupation | researcher | Q1650915 |
| P21 | sex or gender | male | Q6581097 |
| Q42328348 | 2016 update on APBioNet's annual international conference on bioinformatics (InCoB) |
| Q55084402 | A Funneled Conformational Landscape Governs Flavivirus Fusion Peptide Interaction with Lipid Membranes. |
| Q50925142 | A Spring-Loaded Mechanism Governs the Clamp-like Dynamics of the Skp Chaperone. |
| Q93052134 | A T164S mutation in the dengue virus NS1 protein is associated with greater disease severity in mice |
| Q60214995 | A Thermodynamic Funnel Drives Bacterial Lipopolysaccharide Transfer in the TLR4 Pathway |
| Q38663994 | A polar SxxS motif drives assembly of the transmembrane domains of Toll-like receptor 4. |
| Q53622596 | A study on Fe(2+) - α-helical-rich keratin complex formation using isothermal titration calorimetry and molecular dynamics simulation. |
| Q33630470 | A-ring dihalogenation increases the cellular activity of combretastatin-templated tetrazoles |
| Q48168674 | Activation of Toll-like receptors nucleates assembly of the MyDDosome signaling hub. |
| Q33737867 | Aggregation of thrombin-derived C-terminal fragments as a previously undisclosed host defense mechanism. |
| Q104477127 | An Alternative HIV-1 Non-Nucleoside Reverse Transcriptase Inhibition Mechanism: Targeting the p51 Subunit |
| Q88340846 | An Optical Technique for Mapping Microviscosity Dynamics in Cellular Organelles |
| Q37776747 | Antimicrobial and cell-penetrating peptides: structure, assembly and mechanisms of membrane lysis via atomistic and coarse-grained molecular dynamics simulations. |
| Q35635569 | Bilayer deformation by the Kv channel voltage sensor domain revealed by self-assembly simulations. |
| Q36268765 | Bioinformatics and systems biology research update from the 15th International Conference on Bioinformatics (InCoB2016). |
| Q36500499 | Characterizing the Conformational Landscape of Flavivirus Fusion Peptides via Simulation and Experiment |
| Q46982775 | Coarse-grain simulations of the R-SNARE fusion protein in its membrane environment detect long-lived conformational sub-states. |
| Q30368740 | Coarse-grained MD simulations of membrane protein-bilayer self-assembly. |
| Q79372145 | Coarse-grained molecular dynamics simulations of membrane proteins and peptides |
| Q46334833 | Coarse-grained molecular dynamics simulations of the energetics of helix insertion into a lipid bilayer. |
| Q102332745 | Concentration- and pH-Dependent Oligomerization of the Thrombin-Derived C-Terminal Peptide TCP-25 |
| Q30163865 | Conformational sampling and dynamics of membrane proteins from 10-nanosecond computer simulations. |
| Q54455735 | Cysteine-scanning mutagenesis and disulfide mapping studies of the conserved domain of the twin-arginine translocase TatB component. |
| Q37504438 | Design, synthesis, and biological evaluation of an allosteric inhibitor of HSET that targets cancer cells with supernumerary centrosomes |
| Q90996274 | Directing GDNF-mediated neuronal signaling with proactively programmable cell-surface saccharide-free glycosaminoglycan mimetics |
| Q36054444 | Dynamics of Crowded Vesicles: Local and Global Responses to Membrane Composition |
| Q37000542 | Dynamics of the antigen-binding grooves in CD1 proteins: reversible hydrophobic collapse in the lipid-free state. |
| Q95370928 | Editorial |
| Q51088716 | Efficient Characterization of Protein Cavities within Molecular Simulation Trajectories: trj_cavity. |
| Q90737957 | Energetic Fingerprinting of Ligand Binding to Paralogous Proteins: The Case of the Apoptotic Pathway |
| Q51367995 | Energetics and Dynamics Across the Bcl-2-Regulated Apoptotic Pathway Reveal Distinct Evolutionary Determinants of Specificity and Affinity. |
| Q36357406 | Energetics of Endotoxin Recognition in the Toll-Like Receptor 4 Innate Immune Response |
| Q90025222 | Engineering an Osmosensor by Pivotal Histidine Positioning within Disordered Helices |
| Q52717686 | Evidence that TLR4 Is Not a Receptor for Saturated Fatty Acids but Mediates Lipid-Induced Inflammation by Reprogramming Macrophage Metabolism. |
| Q30155834 | Exploring the conformational dynamics and membrane interactions of PorB from C. glutamicum: a multi-scale molecular dynamics simulation study. |
| Q97679480 | Extending the Martini Coarse-Grained Force Field to N-Glycans |
| Q93083711 | Facile saccharide-free mimetics that recapitulate key features of glycosaminoglycan sulfation patterns |
| Q92259329 | Flavivirus Cross-Reactivity to Dengue Nonstructural Protein 1 Antigen Detection Assays |
| Q87365245 | Free energy predictions of ligand binding to an α-helix using steered molecular dynamics and umbrella sampling simulations |
| Q42381527 | Full-Length OmpA: Structure, Function, and Membrane Interactions Predicted by Molecular Dynamics Simulations |
| Q51039436 | Full-length, Oligomeric Structure of Wzz Determined by Cryoelectron Microscopy Reveals Insights into Membrane-Bound States. |
| Q40048776 | Helix-helix interactions in membrane proteins: coarse-grained simulations of glycophorin a helix dimerization. |
| Q90022265 | How Ligand Binding Affects the Dynamical Transition Temperature in Proteins |
| Q28596129 | Hydrocarbons Are Essential for Optimal Cell Size, Division, and Growth of Cyanobacteria |
| Q51113178 | Impairing Cohesin Smc1/3 Head Engagement Compensates for the Lack of Eco1 Function. |
| Q39401803 | Increased endothelial cell selectivity of triazole-bridged dihalogenated A-ring analogues of combretastatin A-1. |
| Q91241445 | Infectivity of Dengue Virus Serotypes 1 and 2 Is Correlated with E-Protein Intrinsic Dynamics but Not to Envelope Conformations |
| Q89048932 | Influence of pH on the activity of thrombin-derived antimicrobial peptides |
| Q30159902 | Insertion and assembly of membrane proteins via simulation. |
| Q92110834 | Insights into water accessible pathways and the inactivation mechanism of proton translocation by the membrane-embedded domain of V-type ATPases |
| Q28546494 | Interaction of the antimicrobial peptide polymyxin B1 with both membranes of E. coli: a molecular dynamics study |
| Q89412676 | Introductory note for JBCB special issue |
| Q35589991 | Ion channel gating: insights via molecular simulations. |
| Q90310330 | Linker length affects photostability of protein-targeted sensor of cellular microviscosity |
| Q79341540 | Lipid/protein interactions and the membrane/water interfacial region |
| Q30160382 | MD simulations of spontaneous membrane protein/detergent micelle formation. |
| Q59350199 | Mechanism of Enhanced Immature Dengue Virus Attachment to Endosomal Membrane Induced by prM Antibody |
| Q30332957 | Membrane protein dynamics versus environment: simulations of OmpA in a micelle and in a bilayer. |
| Q30351245 | Membrane protein structure quality in molecular dynamics simulation. |
| Q27311533 | Membrane recognition and dynamics of the RNA degradosome |
| Q27939366 | Minor pseudopilin self-assembly primes type II secretion pseudopilus elongation. |
| Q60215001 | Molecular basis for the maintenance of lipid asymmetry in the outer membrane ofEscherichia coli |
| Q90179106 | Molecular basis of dengue virus serotype 2 morphological switch from 29°C to 37°C |
| Q45789108 | Molecular dynamics simulations and docking of non-nucleoside reverse transcriptase inhibitors (NNRTIs): a possible approach to personalized HIV treatment. |
| Q42226280 | Molecular dynamics simulations of DNA within a nanopore: arginine-phosphate tethering and a binding/sliding mechanism for translocation |
| Q79934346 | Molecular dynamics simulations of GlpF in a micelle vs in a bilayer: conformational dynamics of a membrane protein as a function of environment |
| Q98203258 | Molecular dynamics simulations of bacterial outer membrane lipid extraction: Adequate sampling? |
| Q81185368 | Molecular dynamics simulations of membrane proteins |
| Q85831701 | Molecular dynamics simulations of membrane proteins |
| Q42212608 | Molecular mechanism of selective recruitment of Syk kinases by the membrane antigen-receptor complex. |
| Q100635140 | Molecular simulations unravel the molecular principles that mediate selective permeability of carboxysome shell protein |
| Q92892046 | Multiscale Modeling and Simulation Approaches to Lipid-Protein Interactions |
| Q92219514 | Multiscale modeling of innate immune receptors: Endotoxin recognition and regulation by host defense peptides |
| Q92998536 | Multiscale modelling and simulation of viruses |
| Q38986597 | Multiscale molecular dynamics simulation approaches to the structure and dynamics of viruses |
| Q38049277 | Multiscale molecular dynamics simulations of membrane proteins. |
| Q90609780 | Not all therapeutic antibody isotypes are equal: the case of IgM versus IgG in Pertuzumab and Trastuzumab |
| Q38793082 | OmpA: A Flexible Clamp for Bacterial Cell Wall Attachment. |
| Q91571037 | On the ion coupling mechanism of the MATE transporter ClbM |
| Q30157953 | Outer membrane proteins: comparing X-ray and NMR structures by MD simulations in lipid bilayers. |
| Q88788400 | Partial Intrinsic Disorder Governs the Dengue Capsid Protein Conformational Ensemble |
| Q40243483 | Polar N-terminal Residues Conserved in Type 2 Secretion Pseudopilins Determine Subunit Targeting and Membrane Extraction Steps during Fibre Assembly |
| Q43261532 | Predicted structural basis for CD1c presentation of mycobacterial branched polyketides and long lipopeptide antigens. |
| Q38688129 | Progress in Molecular Dynamics Simulations of Gram-Negative Bacterial Cell Envelopes |
| Q42706696 | Protein-protein interactions in paralogues: Electrostatics modulates specificity on a conserved steric scaffold. |
| Q28581314 | Pushing the Envelope: Dengue Viral Membrane Coaxed into Shape by Molecular Simulations |
| Q35221766 | Revisiting the interaction between the chaperone Skp and lipopolysaccharide |
| Q38123951 | Selective inhibition of the unfolded protein response: targeting catalytic sites for Schiff base modification |
| Q33739738 | Selective inhibitors of trypanosomal uridylyl transferase RET1 establish druggability of RNA post-transcriptional modifications |
| Q42943551 | Self-assembly of a simple membrane protein: coarse-grained molecular dynamics simulations of the influenza M2 channel. |
| Q58763091 | Single mutations in the ε subunit from thermophilic PS3 generate a high binding affinity site for ATP |
| Q59352490 | Single-molecule studies of flavivirus envelope dynamics: Experiment and computation |
| Q27703207 | Structural Basis of Pullulanase Membrane Binding and Secretion Revealed by X-Ray Crystallography, Molecular Dynamics and Biochemical Analysis |
| Q58876292 | Structural and energetic basis for H+ versus Na+ binding selectivity in ATP synthase Fo rotors |
| Q61136456 | Structural basis for endotoxin neutralisation and anti-inflammatory activity of thrombin-derived C-terminal peptides |
| Q60215017 | Structural basis for endotoxin neutralization and anti-inflammatory activity of thrombin-derived C-terminal peptides |
| Q92316816 | Structure and subunit arrangement of Mycobacterial F1FO ATP synthase and novel features of the unique mycobacterial subunit δ |
| Q63246236 | Structure mapping of dengue and Zika viruses reveals functional long-range interactions |
| Q56880530 | Structure mapping of dengue and Zika viruses reveals new functional long-range interactions |
| Q33844853 | Systematic analysis of protein identity between Zika virus and other arthropod-borne viruses |
| Q28550348 | The Structural Basis for Activation and Inhibition of ZAP-70 Kinase Domain |
| Q40207899 | The Structural Basis for Lipid and Endotoxin Binding in RP105-MD-1, and Consequences for Regulation of Host Lipopolysaccharide Sensitivity. |
| Q57114421 | The architecture of the OmpC-MlaA complex sheds light on the maintenance of outer membrane lipid asymmetry in |
| Q92021880 | The disordered plant dehydrin Lti30 protects the membrane during water-related stress by cross-linking lipids |
| Q24596804 | The molecular basis for selective inhibition of unconventional mRNA splicing by an IRE1-binding small molecule |
| Q38542928 | The role of protein-protein interactions in Toll-like receptor function. |
| Q37181184 | The severity of hereditary porphyria is modulated by the porphyrin exporter and Lan antigen ABCB6. |
| Q35809645 | The simulation approach to bacterial outer membrane proteins. |
| Q45352832 | The simulation approach to lipid-protein interactions |
| Q37404966 | The structural basis for endotoxin-induced allosteric regulation of the Toll-like receptor 4 (TLR4) innate immune receptor. |
| Q92915832 | The structural basis for membrane assembly of immunoreceptor signalling complexes |
| Q79384860 | Transmembrane helix-helix interactions: comparative simulations of the glycophorin a dimer |
| Q40182180 | Understanding dengue virus capsid protein disordered N-Terminus and pep14-23-based inhibition |
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