| review article | Q7318358 |
| scholarly article | Q13442814 |
| P50 | author | Austin O Maduka | Q89682231 |
| P2093 | author name string | Toshifumi Inada | |
| Shannon E Dougherty | |||
| Gustavo M Silva | |||
| P2860 | cites work | Mechanisms and functions of ribosome-associated protein quality control | Q92802742 |
| Polyubiquitin Chains Linked by Lysine Residue 48 (K48) Selectively Target Oxidized Proteins In Vivo | Q93092366 | ||
| Site-Specific K63 Ubiquitinomics Provides Insights into Translation Regulation under Stress | Q93389372 | ||
| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project | Q21061203 | ||
| Genome-wide and functional annotation of human E3 ubiquitin ligases identifies MULAN, a mitochondrial E3 that regulates the organelle's dynamics and signaling | Q21144354 | ||
| Characterization of a mammalian homolog of the GCN2 eukaryotic initiation factor 2alpha kinase | Q22010589 | ||
| Ubiquitin is phosphorylated by PINK1 to activate parkin | Q24296532 | ||
| The Protein Data Bank | Q24515306 | ||
| RNA-Seq: a revolutionary tool for transcriptomics | Q24596169 | ||
| Compilation of transcription regulating proteins | Q24599406 | ||
| HECT and RING finger families of E3 ubiquitin ligases at a glance | Q24599672 | ||
| Proposed role of ATP in protein breakdown: conjugation of protein with multiple chains of the polypeptide of ATP-dependent proteolysis | Q24621105 | ||
| Systematic and quantitative assessment of the ubiquitin-modified proteome | Q24634631 | ||
| Quantitative proteomics reveals the function of unconventional ubiquitin chains in proteasomal degradation | Q24643067 | ||
| Regulation and cellular roles of ubiquitin-specific deubiquitinating enzymes | Q24645701 | ||
| Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling | Q24651977 | ||
| Ubiquitin signaling in immune responses | Q26751376 | ||
| Ubiquitin modifications | Q26751380 | ||
| E2 enzymes: more than just middle men | Q26752818 | ||
| Ubiquitin chain diversity at a glance | Q26767117 | ||
| Ribosome-associated protein quality control | Q26770828 | ||
| Targeting the ubiquitin pathway for cancer treatment | Q26866185 | ||
| ROS-dependent signal transduction | Q27005917 | ||
| The structure of the eukaryotic ribosome at 3.0 Å resolution | Q27675638 | ||
| Regulation of A20 and other OTU deubiquitinases by reversible oxidation | Q27676707 | ||
| Structure of ubiquitin refined at 1.8 A resolution | Q27728512 | ||
| A relationship between protein stability and protein function | Q27730341 | ||
| RING domain E3 ubiquitin ligases | Q27860546 | ||
| Genomic expression programs in the response of yeast cells to environmental changes | Q27860823 | ||
| Transcriptional regulation in mammalian cells by sequence-specific DNA binding proteins | Q27861094 | ||
| Dynamic ubiquitination of the mitogen-activated protein kinase kinase (MAPKK) Ste7 determines mitogen-activated protein kinase (MAPK) specificity. | Q27930260 | ||
| UBA 1: an essential yeast gene encoding ubiquitin-activating enzyme | Q27931184 | ||
| Ubp3 requires a cofactor, Bre5, to specifically de-ubiquitinate the COPII protein, Sec23. | Q27932632 | ||
| Cdc48 and Ufd3, new partners of the ubiquitin protease Ubp3, are required for ribophagy | Q27932851 | ||
| Rad6-Bre1-mediated histone H2B ubiquitylation modulates the formation of double-strand breaks during meiosis | Q27932934 | ||
| Analysis of the deubiquitinating enzymes of the yeast Saccharomyces cerevisiae | Q27932938 | ||
| The yeast DNA repair gene RAD6 encodes a ubiquitin-conjugating enzyme | Q27933609 | ||
| Protein synthesis. Rqc2p and 60S ribosomal subunits mediate mRNA-independent elongation of nascent chains | Q27933843 | ||
| Bre1, an E3 ubiquitin ligase required for recruitment and substrate selection of Rad6 at a promoter | Q27933859 | ||
| A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay | Q27934461 | ||
| Role of a ribosome-associated E3 ubiquitin ligase in protein quality control | Q27936843 | ||
| Yeast DNA repair proteins Rad6 and Rad18 form a heterodimer that has ubiquitin conjugating, DNA binding, and ATP hydrolytic activities | Q27938794 | ||
| Mature ribosomes are selectively degraded upon starvation by an autophagy pathway requiring the Ubp3p/Bre5p ubiquitin protease | Q27938863 | ||
| K63 polyubiquitination is a new modulator of the oxidative stress response | Q27938946 | ||
| A role for ubiquitin in the clearance of nonfunctional rRNAs | Q27939416 | ||
| Cdc48/p97 promotes degradation of aberrant nascent polypeptides bound to the ribosome | Q27939735 | ||
| The tails of ubiquitin precursors are ribosomal proteins whose fusion to ubiquitin facilitates ribosome biogenesis | Q27939801 | ||
| 40S subunit dissociation and proteasome-dependent RNA degradation in nonfunctional 25S rRNA decay | Q27940372 | ||
| Regulation of translation initiation in eukaryotes: mechanisms and biological targets | Q28111696 | ||
| Correlation between protein and mRNA abundance in yeast | Q28137554 | ||
| The ubiquitin code | Q28265104 | ||
| Ubiquitin chain conformation regulates recognition and activity of interacting proteins | Q28280440 | ||
| Regulatory mechanisms involved in the control of ubiquitin homeostasis | Q28280583 | ||
| A genomic and functional inventory of deubiquitinating enzymes | Q28284911 | ||
| Characterization of the yeast transcriptome | Q28302110 | ||
| The ubiquitin-proteasome system | Q28305844 | ||
| Dual E1 activation systems for ubiquitin differentially regulate E2 enzyme charging | Q28307753 | ||
| A mouse forward genetics screen identifies LISTERIN as an E3 ubiquitin ligase involved in neurodegeneration | Q28585283 | ||
| The catalytic mechanism of guanine nucleotide exchange factor action and competitive inhibition by phosphorylated eukaryotic initiation factor 2 | Q28608922 | ||
| Listerin-dependent nascent protein ubiquitination relies on ribosome subunit dissociation | Q28675845 | ||
| Ribosomal proteins produced in excess are degraded by the ubiquitin-proteasome system | Q28828325 | ||
| Structural mechanism for the recognition and ubiquitination of a single nucleosome residue by Rad6-Bre1 | Q28829129 | ||
| ZNF598 and RACK1 Regulate Mammalian Ribosome-Associated Quality Control Function by Mediating Regulatory 40S Ribosomal Ubiquitylation | Q28975780 | ||
| Eukaryotic ribosome biogenesis at a glance | Q29542167 | ||
| A proteomics approach to understanding protein ubiquitination | Q29547312 | ||
| Ubiquitin-binding domains | Q29614358 | ||
| Proteasomes and their kin: proteases in the machine age | Q29614359 | ||
| A 26 S protease subunit that binds ubiquitin conjugates | Q29614362 | ||
| TRANSFAC: an integrated system for gene expression regulation | Q29614502 | ||
| Translational regulation of GCN4 and the general amino acid control of yeast | Q29615275 | ||
| Functional specificity among ribosomal proteins regulates gene expression | Q39666047 | ||
| The Cost of Protein Production. | Q40150659 | ||
| Selectivity of the ubiquitin pathway for oxidatively modified proteins: relevance to protein precipitation diseases | Q40385382 | ||
| Aging, energy, and oxidative stress in neurodegenerative diseases. | Q40478731 | ||
| Binding of polyubiquitin chains to ubiquitin-associated (UBA) domains of HHR23A. | Q40488188 | ||
| Cell cycle-regulated modification of the ribosome by a variant multiubiquitin chain | Q40863875 | ||
| The E3 ubiquitin ligase and RNA-binding protein ZNF598 orchestrates ribosome quality control of premature polyadenylated mRNAs | Q40975929 | ||
| Receptor for activated C kinase 1 stimulates nascent polypeptide-dependent translation arrest | Q41108626 | ||
| Ubiquitination of stalled ribosome triggers ribosome-associated quality control | Q41170038 | ||
| Control of messenger RNA stability in higher eukaryotes | Q41293585 | ||
| Degradation of Redox-Sensitive Proteins including Peroxiredoxins and DJ-1 is Promoted by Oxidation-induced Conformational Changes and Ubiquitination | Q41323221 | ||
| The repertoires of ubiquitinating and deubiquitinating enzymes in eukaryotic genomes | Q41436775 | ||
| The Gcn4 transcription factor reduces protein synthesis capacity and extends yeast lifespan | Q41630273 | ||
| Targeting of substrates to the 26S proteasome | Q41641565 | ||
| Functional specialization of ribosomes? | Q41859001 | ||
| Linkage-specific avidity defines the lysine 63-linked polyubiquitin-binding preference of rap80. | Q42080792 | ||
| Translation drives mRNA quality control | Q42093433 | ||
| Mechanism of Lys48-linked polyubiquitin chain recognition by the Mud1 UBA domain | Q42139176 | ||
| Ribosome-associated Asc1/RACK1 is required for endonucleolytic cleavage induced by stalled ribosome at the 3' end of nonstop mRNA | Q42140941 | ||
| Importance of catalase in the adaptive response to hydrogen peroxide: analysis of acatalasaemic Saccharomyces cerevisiae | Q42159933 | ||
| Crt10 directs the cullin-E3 ligase Rtt101 to nonfunctional 25S rRNA decay | Q42176308 | ||
| The ubiquitin hybrid gene UBA52 regulates ubiquitination of ribosome and sustains embryonic development | Q42371018 | ||
| Translation of the poly(A) tail plays crucial roles in nonstop mRNA surveillance via translation repression and protein destabilization by proteasome in yeast | Q42924383 | ||
| Principles of ER cotranslational translocation revealed by proximity-specific ribosome profiling | Q43093001 | ||
| Phosphorylation of ubiquitin at Ser65 affects its polymerization, targets, and proteome-wide turnover | Q43244956 | ||
| RNA interference of valosin-containing protein (VCP/p97) reveals multiple cellular roles linked to ubiquitin/proteasome-dependent proteolysis | Q44681202 | ||
| Neurodegenerative diseases and oxidative stress | Q44805871 | ||
| Identification of GCN2 as new redox regulator for oxidative stress prevention in vivo | Q44970855 | ||
| The absolute quantification strategy: a general procedure for the quantification of proteins and post-translational modifications | Q45275572 | ||
| The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity | Q47210447 | ||
| Ubiquitin signaling and autophagy | Q47349935 | ||
| Ribosome Collision Is Critical for Quality Control during No-Go Decay | Q47752031 | ||
| Ub-ProT reveals global length and composition of protein ubiquitylation in cells | Q48096070 | ||
| Proteomic Analysis Identifies Ribosome Reduction as an Effective Proteotoxic Stress Response. | Q36444204 | ||
| Deubiquitinases as a signaling target of oxidative stress | Q36501472 | ||
| Protein monoubiquitylation: targets and diverse functions | Q36554464 | ||
| Reversible inactivation of deubiquitinases by reactive oxygen species in vitro and in cells. | Q36737013 | ||
| Gcn4 is required for the response to peroxide stress in the yeast Saccharomyces cerevisiae. | Q36739878 | ||
| Mammalian Heat Shock Response and Mechanisms Underlying Its Genome-wide Transcriptional Regulation | Q36782793 | ||
| Heat shock and oxygen radicals stimulate ubiquitin-dependent degradation mainly of newly synthesized proteins | Q36843138 | ||
| Absolute quantification of protein and post-translational modification abundance with stable isotope-labeled synthetic peptides | Q37078446 | ||
| RNA-binding proteins and post-transcriptional gene regulation | Q37110656 | ||
| Structure and function of the yeast listerin (Ltn1) conserved N-terminal domain in binding to stalled 60S ribosomal subunits | Q37126852 | ||
| Polyubiquitin chains: functions, structures, and mechanisms | Q37148338 | ||
| Ubiquitylation by the Ltn1 E3 ligase protects 60S ribosomes from starvation-induced selective autophagy | Q37721756 | ||
| Regulation of translation by hydrogen peroxide | Q37815199 | ||
| No-go decay: a quality control mechanism for RNA in translation | Q37940386 | ||
| RINGs hold the key to ubiquitin transfer | Q37966409 | ||
| Linear ubiquitination: a newly discovered regulator of cell signalling | Q38075345 | ||
| The demographics of the ubiquitin system | Q38439051 | ||
| Components of ubiquitin-protein ligase system. Resolution, affinity purification, and role in protein breakdown | Q38583853 | ||
| UCSF ChimeraX: Meeting Modern Challenges in Visualization and Analysis. | Q38677893 | ||
| Highly Multiplexed Quantitative Mass Spectrometry Analysis of Ubiquitylomes. | Q38736515 | ||
| The increasing complexity of the ubiquitin code | Q38845500 | ||
| Proteome complexity and the forces that drive proteome imbalance. | Q38954697 | ||
| The emerging complexity of ubiquitin architecture | Q39052139 | ||
| RNA modifications and structures cooperate to guide RNA-protein interactions. | Q39112521 | ||
| Activity-based probes for the ubiquitin conjugation-deconjugation machinery: new chemistries, new tools, and new insights | Q39135148 | ||
| Ribosome profiling and dynamic regulation of translation in mammals | Q39211313 | ||
| Ubiquitin and Parkinson's disease through the looking glass of genetics | Q39241365 | ||
| Oxidative stress, protein damage and repair in bacteria. | Q39249467 | ||
| An emerging role for the ribosome as a nexus for post-translational modifications | Q39264675 | ||
| Mechanisms of Deubiquitinase Specificity and Regulation. | Q39302629 | ||
| Global translational responses to oxidative stress impact upon multiple levels of protein synthesis. | Q39348564 | ||
| The E2 ubiquitin conjugase Rad6 is required for the ArgR/Mcm1 repression of ARG1 transcription | Q39406784 | ||
| A sampling of the yeast proteome | Q39448401 | ||
| A conserved quality-control pathway that mediates degradation of unassembled ribosomal proteins. | Q39463298 | ||
| Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide. | Q50434557 | ||
| Translation factor control of ribosome conformation during start codon selection. | Q51984242 | ||
| Structure and Function of the 26S Proteasome. | Q52322457 | ||
| TOM1p, a yeast hect-domain protein which mediates transcriptional regulation through the ADA/SAGA coactivator complexes. | Q52532015 | ||
| Integrated Genomic Analysis of the Ubiquitin Pathway across Cancer Types. | Q52721693 | ||
| Dom34:hbs1 plays a general role in quality-control systems by dissociation of a stalled ribosome at the 3' end of aberrant mRNA. | Q53174214 | ||
| Failure of RQC machinery causes protein aggregation and proteotoxic stress. | Q53794775 | ||
| Signaling pathways involved in the regulation of mRNA translation. | Q54118148 | ||
| Ubiquitination regulation of inflammatory responses through NF-κB pathway. | Q55328184 | ||
| Ubiquitin and control of transcription | Q56802340 | ||
| ZNF598 Is a Quality Control Sensor of Collided Ribosomes | Q57190424 | ||
| Substrate-engaged 26 proteasome structures reveal mechanisms for ATP-hydrolysis-driven translocation | Q57477239 | ||
| UbiSite approach for comprehensive mapping of lysine and N-terminal ubiquitination sites | Q57979502 | ||
| Substrate-engaged 26S proteasome structures reveal mechanisms for ATP-hydrolysis–driven translocation | Q58024045 | ||
| The deubiquitinating enzyme Ubp2 modulates Rsp5-dependent Lys63-linked polyubiquitin conjugates in Saccharomyces cerevisiae | Q79209223 | ||
| The endonuclease Cue2 cleaves mRNAs at stalled ribosomes during No Go Decay | Q83232241 | ||
| NUFIP1 is a ribosome receptor for starvation-induced ribophagy | Q88487910 | ||
| New Insights into Ribosome Structure and Function | Q89107222 | ||
| Post-translational regulation of ubiquitin signaling | Q89997332 | ||
| Poly-ubiquitin profile in Alzheimer disease brain | Q90024352 | ||
| Heterogeneous translational landscape of the endoplasmic reticulum revealed by ribosome proximity labeling and transcriptome analysis | Q90024723 | ||
| Translation deregulation in human disease | Q90428516 | ||
| The Discovery of Ribosome Heterogeneity and Its Implications for Gene Regulation and Organismal Life | Q90740513 | ||
| Collided ribosomes form a unique structural interface to induce Hel2-driven quality control pathways | Q90890979 | ||
| The Impact of Oxidative Stress on Ribosomes: From Injury to Regulation | Q91097348 | ||
| Oxidation and alkylation stresses activate ribosome-quality control | Q91825235 | ||
| Branching Out: Improved Signaling by Heterotypic Ubiquitin Chains | Q91837029 | ||
| Extensive post-transcriptional buffering of gene expression in the response to severe oxidative stress in baker's yeast | Q92266393 | ||
| CAT tails drive degradation of stalled polypeptides on and off the ribosome | Q92325284 | ||
| Sequential Ubiquitination of Ribosomal Protein uS3 Triggers the Degradation of Non-functional 18S rRNA | Q92505681 | ||
| Ribosome Abundance Control Via the Ubiquitin-Proteasome System and Autophagy | Q92720022 | ||
| Autophagy and metabolism | Q29615974 | ||
| Physiological functions of the HECT family of ubiquitin ligases | Q29617293 | ||
| Nonproteolytic functions of ubiquitin in cell signaling | Q29617294 | ||
| Ubiquitination of a yeast plasma membrane receptor signals its ligand-stimulated endocytosis | Q29617390 | ||
| What is oxidative stress? | Q33849762 | ||
| Global signatures of protein and mRNA expression levels | Q33874396 | ||
| Ubiquitin as a degradation signal | Q33937351 | ||
| Role of oxidative stress in cardiovascular diseases | Q33953686 | ||
| Using the transcriptome to annotate the genome | Q33958846 | ||
| Ubiquitin genes as a paradigm of concerted evolution of tandem repeats | Q34048719 | ||
| Global analysis of lysine ubiquitination by ubiquitin remnant immunoaffinity profiling | Q34159143 | ||
| Ribosome profiling reveals pervasive translation outside of annotated protein-coding genes | Q34435177 | ||
| Ubiquitin and control of transcription | Q34463020 | ||
| Mechanisms of In Vivo Ribosome Maintenance Change in Response to Nutrient Signals | Q34546939 | ||
| Potential roles for ubiquitin and the proteasome during ribosome biogenesis | Q34718323 | ||
| Linear ubiquitin fusion to Rps31 and its subsequent cleavage are required for the efficient production and functional integrity of 40S ribosomal subunits | Q34942783 | ||
| Ubiquitin-proteasome pathway and cellular responses to oxidative stress | Q35027877 | ||
| Structure and assembly pathway of the ribosome quality control complex | Q35064391 | ||
| Ubiquitin acetylation inhibits polyubiquitin chain elongation | Q35084540 | ||
| Inhibiting K63 polyubiquitination abolishes no-go type stalled translation surveillance in Saccharomyces cerevisiae | Q35613568 | ||
| The Unfolded Protein Response Triggers Site-Specific Regulatory Ubiquitylation of 40S Ribosomal Proteins | Q35816038 | ||
| Diversity and selectivity in mRNA translation on the endoplasmic reticulum | Q35827837 | ||
| Rkr1/Ltn1 Ubiquitin Ligase-mediated Degradation of Translationally Stalled Endoplasmic Reticulum Proteins | Q35883810 | ||
| The Proteasome Distinguishes between Heterotypic and Homotypic Lysine-11-Linked Polyubiquitin Chains | Q35943032 | ||
| Multiubiquitylation by E4 enzymes: 'one size' doesn't fit all. | Q36092032 | ||
| The ubiquitin-proteasome system of Saccharomyces cerevisiae | Q36268060 | ||
| Proteasome-associated proteins: regulation of a proteolytic machine | Q36275413 | ||
| Efficient APC/C substrate degradation in cells undergoing mitotic exit depends on K11 ubiquitin linkages | Q36336999 | ||
| Genome-wide ribosome profiling reveals complex translational regulation in response to oxidative stress | Q36378323 | ||
| P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
| P6216 | copyright status | copyrighted | Q50423863 |
| P433 | issue | 3 | |
| P577 | publication date | 2020-02-09 | |
| P1433 | published in | International Journal of Molecular Sciences | Q3153277 |
| P1476 | title | Expanding Role of Ubiquitin in Translational Control | |
| P478 | volume | 21 |
Search more.