scholarly article | Q13442814 |
P50 | author | Sebastian Bittrich | Q59676928 |
P2093 | author name string | Michael Schroeder | |
Dirk Labudde | |||
P2860 | cites work | Implications of thermodynamics of protein folding for evolution of primary sequences | Q59093418 |
Application of an interpretable classification model on Early Folding Residues during protein folding | Q60920298 | ||
BioJava 5: A community driven open-source bioinformatics library | Q64116706 | ||
Mapping the conformational stability of maltose binding protein at the residue scale using nuclear magnetic resonance hydrogen exchange experiments | Q87418953 | ||
Protein 3D structure computed from evolutionary sequence variation | Q21090966 | ||
TM-align: a protein structure alignment algorithm based on the TM-score | Q24522708 | ||
How significant is a protein structure similarity with TM-score = 0.5? | Q24598714 | ||
BioJava: an open-source framework for bioinformatics in 2012 | Q24630147 | ||
The nature of protein folding pathways | Q26998903 | ||
Trimming Down a Protein Structure to Its Bare Foldons: SPATIAL ORGANIZATION OF THE COOPERATIVE UNIT | Q27675801 | ||
Contribution of hydrogen bonds to protein stability | Q27681961 | ||
Contributions of hydrogen bonds of Thr 157 to the thermodynamic stability of phage T4 lysozyme | Q27728523 | ||
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features | Q27860675 | ||
Environment and exposure to solvent of protein atoms. Lysozyme and insulin | Q28245387 | ||
The protein folding problem | Q28284812 | ||
Start2Fold: a database of hydrogen/deuterium exchange data on protein folding and stability | Q28603075 | ||
Protein structure prediction from sequence variation | Q28914772 | ||
Evaluation of residue-residue contact prediction in CASP10 | Q29048194 | ||
UniProt: a hub for protein information | Q29547457 | ||
Scoring function for automated assessment of protein structure template quality | Q29615862 | ||
A surprising simplicity to protein folding. | Q30326802 | ||
Rupture of the hydrogen bond linking two Omega-loops induces the molten globule state at neutral pH in cytochrome c. | Q30332982 | ||
Automated procedure for contact-map-based protein structure reconstruction. | Q30360793 | ||
Fidelity of the protein structure reconstruction from inter-residue proximity constraints. | Q30362065 | ||
Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model | Q30364844 | ||
The pros and cons of predicting protein contact maps. | Q30366465 | ||
CONFOLD: Residue-residue contact-guided ab initio protein folding. | Q30374675 | ||
Assessment of the utility of contact-based restraints in accelerating the prediction of protein structure using molecular dynamics simulations. | Q30377837 | ||
Optimal contact definition for reconstruction of contact maps | Q30389746 | ||
ConEVA: a toolbox for comprehensive assessment of protein contacts | Q30396077 | ||
Blurring contact maps of thousands of proteins: what we can learn by reconstructing 3D structure | Q30398542 | ||
Applications of contact predictions to structural biology | Q30402065 | ||
Comparative modeling: the state of the art and protein drug target structure prediction | Q30402152 | ||
Principles of protein folding--a perspective from simple exact models. | Q30417429 | ||
Conservation and prediction of solvent accessibility in protein families | Q30419557 | ||
Defining an essence of structure determining residue contacts in proteins | Q30972736 | ||
The RCSB protein data bank: integrative view of protein, gene and 3D structural information | Q31139806 | ||
How protein stability and new functions trade off | Q33332450 | ||
The hydrogen exchange core and protein folding. | Q33714720 | ||
Protein folding: the stepwise assembly of foldon units | Q33935275 | ||
PLIP: fully automated protein-ligand interaction profiler | Q35601315 | ||
Hydrogen exchange methods to study protein folding | Q35850714 | ||
Structural characterization of folding intermediates in cytochrome c by H-exchange labelling and proton NMR. | Q36199183 | ||
Protein folding dynamics: the diffusion-collision model and experimental data | Q36278710 | ||
Foldons, protein structural modules, and exons | Q37708079 | ||
The role of key residues in structure, function, and stability of cytochrome-c. | Q38101468 | ||
Early Folding Events, Local Interactions, and Conservation of Protein Backbone Rigidity | Q38273110 | ||
Universally conserved positions in protein folds: reading evolutionary signals about stability, folding kinetics and function | Q38321925 | ||
Improved protein structure reconstruction using secondary structures, contacts at higher distance thresholds, and non-contacts | Q38603470 | ||
Exploring the Sequence-based Prediction of Folding Initiation Sites in Proteins | Q38617959 | ||
Co-evolution techniques are reshaping the way we do structural bioinformatics | Q41150914 | ||
The case for defined protein folding pathways. | Q41293309 | ||
Origins of coevolution between residues distant in protein 3D structures. | Q41561983 | ||
Protein folding intermediates: native-state hydrogen exchange | Q42322493 | ||
From protein sequence to dynamics and disorder with DynaMine | Q44486815 | ||
Quantitative evaluation of experimental NMR restraints. | Q44593564 | ||
Assessment of contact predictions in CASP12: co-evolution and deep learning coming of age. | Q45944467 | ||
Assessment of hard target modeling in CASP12 reveals an emerging role of alignment-based contact prediction methods. | Q46130527 | ||
Critical assessment of methods of protein structure prediction (CASP)-Round XII. | Q46348067 | ||
Studies on protein folding, unfolding and fluctuations by computer simulation. I. The effect of specific amino acid sequence represented by specific inter-unit interactions | Q46518756 | ||
Forecasting residue-residue contact prediction accuracy | Q47313672 | ||
Visualization and analysis of non-covalent contacts using the Protein Contacts Atlas. | Q47563134 | ||
Network scaling invariants help to elucidate basic topological principles of proteins. | Q51906167 | ||
The single helix in protein L is largely disrupted at the rate-limiting step in folding. | Q52532694 | ||
CMView: interactive contact map visualization and analysis. | Q52896524 | ||
Local perturbations by ligand binding of hydrogen deuterium exchange kinetics in a four-helix bundle protein, acyl coenzyme A binding protein (ACBP). | Q54005293 | ||
Characterizing the relation of functional and Early Folding Residues in protein structures using the example of aminoacyl-tRNA synthetases | Q58098472 | ||
P433 | issue | 1 | |
P304 | page(s) | 18517 | |
P577 | publication date | 2019-12-06 | |
P1433 | published in | Scientific Reports | Q2261792 |
P1476 | title | StructureDistiller: Structural relevance scoring identifies the most informative entries of a contact map | |
P478 | volume | 9 |
Search more.