scholarly article | Q13442814 |
P50 | author | Altuna Akalin | Q56614722 |
Baris Tursun | Q75320229 | ||
Bora Uyar | Q39187035 | ||
P2093 | author name string | Katarzyna Wreczycka | |
Vedran Franke | |||
Ricardo Wurmus | |||
Selman Bulut | |||
P2860 | cites work | Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors | Q21183997 |
An integrated encyclopedia of DNA elements in the human genome | Q22122150 | ||
The Pfam protein families database | Q24619716 | ||
A ChIP on the shoulder? Chromatin immunoprecipitation and validation strategies for ChIP antibodies | Q26776511 | ||
Immunization of nonautoimmune mice with DNA binding domains of the largest subunit of RNA polymerase I results in production of anti-dsDNA and anti-Sm/RNP antibodies | Q64388064 | ||
Breaking of tolerance to native DNA in nonautoimmune mice by immunization with natural protein/DNA complexes | Q64388685 | ||
Induction of anti-DNA antibodies in non autoimmune mice by immunization with a DNA-DNAase I complex | Q64389624 | ||
Specificity and idiotypic analysis of a monoclonal anti-Sm antibody with anti-DNA activity | Q69875752 | ||
Antigen-specific induction of antibodies against native mammalian DNA in nonautoimmune mice | Q70466622 | ||
Green fluorescent protein modified to bind DNA initiates production of anti-DNA antibodies when expressed in vivo | Q77370598 | ||
Anti-ribosomal antibodies from lupus patients bind DNA | Q78576651 | ||
A reassessment of DNA-immunoprecipitation-based genomic profiling | Q89242304 | ||
Protein binding microarrays for the characterization of DNA-protein interactions | Q36732432 | ||
Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals | Q37113864 | ||
Highly expressed loci are vulnerable to misleading ChIP localization of multiple unrelated proteins | Q37319659 | ||
UniProt: the universal protein knowledgebase | Q37556842 | ||
Discriminative motif analysis of high-throughput dataset. | Q37642338 | ||
Determining the specificity of protein-DNA interactions | Q37793836 | ||
A viral DNA-binding domain elicits anti-DNA antibodies of different specificities. | Q38333347 | ||
Specificity and immunochemical properties of anti-DNA antibodies induced in normal mice by immunization with mammalian DNA with a CpG oligonucleotide as adjuvant | Q38346502 | ||
R loops: new modulators of genome dynamics and function | Q38586926 | ||
G-quadruplex structures mark human regulatory chromatin | Q38746800 | ||
Dynamic trans-acting factor colocalization in human cells | Q39062198 | ||
Intracellular transcription of G-rich DNAs induces formation of G-loops, novel structures containing G4 DNA | Q41023029 | ||
Extreme HOT regions are CpG-dense promoters in C. elegans and humans | Q42209149 | ||
Molecular mimicry: anti-DNA antibodies may arise inadvertently as a response to antibodies generated to microorganisms | Q43722238 | ||
A proposal for validation of antibodies. | Q46011400 | ||
Cloning of an antibody binding DNA sequence: pitfalls of DNA/protein immunoprecipitation reactions | Q46586726 | ||
Functional and modelling studies of the binding of human monoclonal anti-DNA antibodies to DNA. | Q47629955 | ||
Genomation: a toolkit to summarize, annotate and visualize genomic intervals. | Q48535467 | ||
Histone H3K9 methylation is dispensable for Caenorhabditis elegans development but suppresses RNA:DNA hybrid-associated repeat instability. | Q50278958 | ||
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project | Q28301622 | ||
CpG islands and the regulation of transcription | Q28315762 | ||
Accelerated Profile HMM Searches | Q29547576 | ||
Regularization Paths for Generalized Linear Models via Coordinate Descent | Q29614491 | ||
GREAT improves functional interpretation of cis-regulatory regions | Q29614846 | ||
Integrative analysis of 111 reference human epigenomes | Q29615565 | ||
S1-DRIP-seq identifies high expression and polyA tracts as major contributors to R-loop formation. | Q30368627 | ||
Active promoters give rise to false positive 'Phantom Peaks' in ChIP-seq experiments. | Q30404787 | ||
Hitchhiker antigens: inconsistent ChIP results, questionable immunohistology data, and poor antibody performance may have a common factor | Q30693043 | ||
Anti-DNA antibodies exhibit different binding motif preferences for single stranded or double stranded DNA. | Q30912550 | ||
Antigenic triggers and molecular targets for anti-double-stranded DNA antibodies | Q31125878 | ||
Specific recognition of a dsDNA sequence motif by an immunoglobulin VH homodimer | Q31131034 | ||
Autoimmunogenicity of the helix-loop-helix DNA-binding domain | Q33383040 | ||
Specific cross-reaction of anti-dsDNA antibody with platelet integrin GPIIIa49-66 | Q33391806 | ||
In vivo expression of a single viral DNA-binding protein generates systemic lupus erythematosus-related autoimmunity to double-stranded DNA and histones | Q33676884 | ||
iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence | Q33715913 | ||
Unlocking the secrets of the genome | Q33745487 | ||
Requirement for DNA CpG content in TLR9-dependent dendritic cell activation induced by DNA-containing immune complexes | Q33815085 | ||
A double-edged sword: R loops as threats to genome integrity and powerful regulators of gene expression | Q33850539 | ||
ChIP-Seq: technical considerations for obtaining high-quality data | Q34024936 | ||
Lupus autoantibodies to native DNA cross-react with the A and D SnRNP polypeptides | Q34122085 | ||
R-loop formation is a distinctive characteristic of unmethylated human CpG island promoters | Q34258378 | ||
GC skew at the 5' and 3' ends of human genes links R-loop formation to epigenetic regulation and transcription termination | Q34358463 | ||
A promoter-level mammalian expression atlas | Q34412203 | ||
Comparative analysis of regulatory information and circuits across distant species | Q34435561 | ||
Human autoantibody recognition of DNA | Q34475971 | ||
Viable RNaseH1 knockout mice show RNaseH1 is essential for R loop processing, mitochondrial and liver function | Q34524329 | ||
Optimization of transcription factor binding map accuracy utilizing knockout-mouse models | Q34579722 | ||
Protein-DNA binding in the absence of specific base-pair recognition | Q34661144 | ||
Variations in duplex DNA conformation detected by the binding of monoclonal autoimmune antibodies | Q35045488 | ||
Widespread misinterpretable ChIP-seq bias in yeast | Q35071005 | ||
p185, an immunodominant epitope, is an autoantigen mimotope. | Q35110970 | ||
A ssDNA Aptamer That Blocks the Function of the Anti-FLAG M2 Antibody | Q35369634 | ||
Genome-wide DNA hypomethylation and RNA:DNA hybrid accumulation in Aicardi-Goutières syndrome | Q35925694 | ||
Peptide inhibition of glomerular deposition of an anti-DNA antibody | Q36029509 | ||
Cotranscriptional processes and their influence on genome stability. | Q36538957 | ||
P275 | copyright license | Creative Commons Attribution 4.0 International | Q20007257 |
P6216 | copyright status | copyrighted | Q50423863 |
P433 | issue | 11 | |
P304 | page(s) | 5735-5745 | |
P577 | publication date | 2019-06-01 | |
P1433 | published in | Nucleic Acids Research | Q135122 |
P1476 | title | HOT or not: examining the basis of high-occupancy target regions | |
P478 | volume | 47 |
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Q98164632 | Occupancy maps of 208 chromatin-associated proteins in one human cell type |
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