Fierce Selection and Interference in B-Cell Repertoire Response to Chronic HIV-1

scientific article published on 01 October 2019

Fierce Selection and Interference in B-Cell Repertoire Response to Chronic HIV-1 is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/MOLBEV/MSZ143
P932PMC publication ID6759071
P698PubMed publication ID31209469

P50authorJakub OtwinowskiQ54901142
Armita NourmohammadQ112339634
P2093author name stringThierry Mora
Aleksandra M Walczak
Marta Łuksza
P2860cites workBeneficial mutation selection balance and the effect of linkage on positive selectionQ24685465
Co-evolution of a broadly neutralizing HIV-1 antibody and founder virusQ27644501
A modification of Jerne's theory of antibody production using the concept of clonal selectionQ28252422
Adaptive protein evolution at the Adh locus in DrosophilaQ28302478
Consistency of VDJ Rearrangement and Substitution Parameters Enables Accurate B Cell Receptor Sequence AnnotationQ28602773
Quantifying evolutionary constraints on B-cell affinity maturationQ28640162
Inferring processes underlying B-cell repertoire diversityQ28640380
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogeniesQ28658397
Predicting evolution.Q54295384
Selection and Neutral Mutations Drive Pervasive Mutability Losses in Long-Lived Anti-HIV B-Cell Lineages.Q55003119
Signatures of selection in the human antibody repertoire: Selective sweeps, competing subclones, and neutral driftQ61450450
High-resolution antibody dynamics of vaccine-induced immune responsesQ28660366
Properties and rates of germline mutations in humansQ28678675
FastTree 2--approximately maximum-likelihood trees for large alignmentsQ28748616
Rapid evolution of the neutralizing antibody response to HIV type 1 infectionQ29618603
Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing dataQ30706182
Distinguishing between selective sweeps and demography using DNA polymorphism dataQ30990469
High-throughput sequencing of the zebrafish antibody repertoireQ33441145
Limited neutralizing antibody specificities drive neutralization escape in early HIV-1 subtype C infectionQ33504604
Short-course antiretroviral therapy in primary HIV infectionQ34037516
Adaptive protein evolution in DrosophilaQ34116884
Germinal centersQ34245271
Predicting evolution from the shape of genealogical treesQ34487304
The immune response during acute HIV-1 infection: clues for vaccine developmentQ34614862
Genetic measurement of memory B-cell recall using antibody repertoire sequencingQ34880392
From fitness landscapes to seascapes: non-equilibrium dynamics of selection and adaptation.Q34949551
Structured observations reveal slow HIV-1 CTL escapeQ35099081
Emergent neutrality in adaptive asexual evolutionQ35620493
Dynamics of immunoglobulin sequence diversity in HIV-1 infected individualsQ35926722
A Public Database of Memory and Naive B-Cell Receptor SequencesQ36101141
Clonal interference in the evolution of influenzaQ36268135
Population genomics of intrapatient HIV-1 evolutionQ36479690
Genealogies of rapidly adapting populationsQ36535424
Effect of temporal fluctuation of selection coefficient on gene frequency in a populationQ37460915
Mutation drift and repertoire shift in the maturation of the immune responseQ39658890
Broadly Neutralizing Antibodies for HIV-1 Prevention or ImmunotherapyQ40411834
Host-Pathogen Coevolution and the Emergence of Broadly Neutralizing Antibodies in Chronic InfectionsQ40605061
Integrating B cell lineage information into statistical tests for detecting selection in Ig sequencesQ41934489
Reliable reconstruction of HIV-1 whole genome haplotypes reveals clonal interference and genetic hitchhiking among immune escape variants.Q42208022
A predictive fitness model for influenzaQ42235123
Antigen receptor repertoire profiling from RNA-seq data.Q47820903
MiXCR: software for comprehensive adaptive immunity profiling.Q48193977
A neoantigen fitness model predicts tumour response to checkpoint blockade immunotherapy.Q50046798
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue10
P304page(s)2184-2194
P577publication date2019-10-01
P1433published inMolecular Biology and EvolutionQ1992656
P1476titleFierce Selection and Interference in B-Cell Repertoire Response to Chronic HIV-1
P478volume36

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Q91272592High-resolution lineage tracking reveals travelling wave of adaptation in laboratory yeastcites workP2860

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