| scholarly article | Q13442814 |
| review article | Q7318358 |
| P50 | author | Alberto Kornblihtt | Q5663204 |
| Tom Misteli | Q7816902 | ||
| Mariano Alló | Q55154498 | ||
| P2093 | author name string | Reini F Luco | |
| Ignacio E Schor | |||
| P2860 | cites work | Human STAGA complex is a chromatin-acetylating transcription coactivator that interacts with pre-mRNA splicing and DNA damage-binding factors in vivo | Q24291710 |
| The human SWI/SNF subunit Brm is a regulator of alternative splicing | Q24298527 | ||
| Genome-scale DNA methylation maps of pluripotent and differentiated cells | Q24621431 | ||
| Genomic mapping of RNA polymerase II reveals sites of co-transcriptional regulation in human cells | Q24811229 | ||
| Alternative isoform regulation in human tissue transcriptomes | Q27861118 | ||
| Chd1 chromodomain links histone H3 methylation with SAGA- and SLIK-dependent acetylation | Q27937996 | ||
| Transcriptional activators differ in their abilities to control alternative splicing | Q28200998 | ||
| Stimulatory effect of splicing factors on transcriptional elongation | Q28214807 | ||
| The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C | Q28287199 | ||
| Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail | Q28297786 | ||
| The C-terminal domain of RNA polymerase II couples mRNA processing to transcription | Q28301744 | ||
| Regulated tissue-specific expression of antagonistic pre-mRNA splicing factors. | Q28582631 | ||
| 5'-Capping enzymes are targeted to pre-mRNA by binding to the phosphorylated carboxy-terminal domain of RNA polymerase II | Q28623635 | ||
| An extensive network of coupling among gene expression machines | Q29547273 | ||
| Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing | Q29547470 | ||
| RNA polymerase II is an essential mRNA polyadenylation factor | Q29614773 | ||
| Pre-mRNA processing reaches back to transcription and ahead to translation | Q29615045 | ||
| RNA and disease | Q29615183 | ||
| The SR protein family of splicing factors: master regulators of gene expression | Q29619935 | ||
| Splice site selection, rate of splicing, and alternative splicing on nascent transcripts | Q30461752 | ||
| Linking splicing to Pol II transcription stabilizes pre-mRNAs and influences splicing patterns | Q33241167 | ||
| Deciphering the ubiquitin-mediated pathway in apicomplexan parasites: a potential strategy to interfere with parasite virulence. | Q33342855 | ||
| Acetylation by the transcriptional coactivator Gcn5 plays a novel role in co-transcriptional spliceosome assembly | Q33510906 | ||
| Complex exon-intron marking by histone modifications is not determined solely by nucleosome distribution | Q33680184 | ||
| First come, first served revisited: factors affecting the same alternative splicing event have different effects on the relative rates of intron removal | Q33799119 | ||
| Deciphering the splicing code | Q34022324 | ||
| Regulation of alternative splicing by histone modifications | Q34035543 | ||
| Antagonistic effects of T-Ag and VP16 reveal a role for RNA pol II elongation on alternative splicing | Q34082987 | ||
| The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced | Q34308679 | ||
| T7 RNA polymerase-directed transcripts are processed in yeast and link 3' end formation to mRNA nuclear export | Q34364453 | ||
| Nova regulates brain-specific splicing to shape the synapse | Q34436585 | ||
| Alternative splicing: multiple control mechanisms and involvement in human disease | Q34586931 | ||
| Functional coupling of RNAP II transcription to spliceosome assembly | Q34650438 | ||
| A genome-wide analysis indicates that yeast pre-mRNA splicing is predominantly posttranscriptional | Q35688363 | ||
| Influence of RNA secondary structure on the pre-mRNA splicing process | Q35968217 | ||
| Promoter usage and alternative splicing | Q36131493 | ||
| Nucleosome positioning as a determinant of exon recognition | Q46849980 | ||
| A genome-wide RNA interference screen reveals that variant histones are necessary for replication-dependent histone pre-mRNA processing. | Q47070600 | ||
| SR protein family members display diverse activities in the formation of nascent and mature mRNPs in vivo. | Q47942040 | ||
| Cotranscriptional spliceosome assembly occurs in a stepwise fashion and requires the cap binding complex. | Q50336085 | ||
| Splicing of Balbiani ring 1 gene pre-mRNA occurs simultaneously with transcription. | Q52544550 | ||
| The arginine methyltransferase CARM1 regulates the coupling of transcription and mRNA processing. | Q53577978 | ||
| ISIS, the intron information system, reveals the high frequency of alternative splicing in the human genome | Q57020086 | ||
| Chromatin organization marks exon-intron structure | Q57058000 | ||
| Effects of RNA secondary structure on alternative splicing of Pre-mRNA: Is folding limited to a region behind the transcribing RNA polymerase? | Q58830817 | ||
| Outcome of donor splice site mutations accounting for congenital afibrinogenemia reflects order of intron removal in the fibrinogen alpha gene (FGA) | Q60656407 | ||
| RNA polymerase II targets pre-mRNA splicing factors to transcription sites in vivo | Q77962891 | ||
| Promoter architecture modulates CFTR exon 9 skipping | Q78488641 | ||
| Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells | Q80143464 | ||
| Disruption of pre-mRNA splicing in vivo results in reorganization of splicing factors | Q36233711 | ||
| Functional association between promoter structure and transcript alternative splicing. | Q36597450 | ||
| Differential recruitment of nuclear receptor coactivators may determine alternative RNA splice site choice in target genes | Q36601454 | ||
| Order of intron removal during splicing of endogenous adenine phosphoribosyltransferase and dihydrofolate reductase pre-mRNA. | Q36823565 | ||
| Transcription of herpes simplex virus tk sequences under the control of wild-type and mutant human RNA polymerase I promoters | Q36885592 | ||
| Specificity of RNA maturation pathways: RNAs transcribed by RNA polymerase III are not substrates for splicing or polyadenylation | Q36922600 | ||
| The splicing factor SC35 has an active role in transcriptional elongation | Q36952048 | ||
| Splice-site pairing is an intrinsically high fidelity process. | Q37100836 | ||
| Differential chromatin marking of introns and expressed exons by H3K36me3. | Q37111430 | ||
| Searching for splicing motifs. | Q37124812 | ||
| Neuronal cell depolarization induces intragenic chromatin modifications affecting NCAM alternative splicing. | Q37132771 | ||
| Co-transcriptional splicing of constitutive and alternative exons | Q37344492 | ||
| Histone H2A.Z cooperates with RNAi and heterochromatin factors to suppress antisense RNAs | Q37352034 | ||
| High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing | Q37363149 | ||
| Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II. | Q37417788 | ||
| Regulation of alternative splicing by short non-coding nuclear RNAs | Q37775454 | ||
| Functional diversity of the hnRNPs: past, present and perspectives | Q37783316 | ||
| Coupling of transcription with alternative splicing: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer | Q38320513 | ||
| SWI/SNF associates with nascent pre-mRNPs and regulates alternative pre-mRNA processing | Q38510244 | ||
| Co-transcriptional commitment to alternative splice site selection. | Q39726004 | ||
| Cotranscriptional recruitment of the U1 snRNP to intron-containing genes in yeast | Q39793431 | ||
| DNA damage regulates alternative splicing through inhibition of RNA polymerase II elongation. | Q39850003 | ||
| Phosphorylation of RNA polymerase II CTD regulates H3 methylation in yeast | Q39895202 | ||
| RNA polymerase II carboxy-terminal domain phosphorylation is required for cotranscriptional pre-mRNA splicing and 3'-end formation | Q40025884 | ||
| SR proteins function in coupling RNAP II transcription to pre-mRNA splicing. | Q40115980 | ||
| RNA polymerase II C-terminal domain mediates regulation of alternative splicing by SRp20. | Q40222409 | ||
| CoAA, a nuclear receptor coactivator protein at the interface of transcriptional coactivation and RNA splicing | Q40376847 | ||
| Coactivator-associated arginine methyltransferase 1, CARM1, affects pre-mRNA splicing in an isoform-specific manner | Q40412216 | ||
| A slow RNA polymerase II affects alternative splicing in vivo | Q40627617 | ||
| Splicing precedes polyadenylation during Drosophila E74A transcription | Q40640692 | ||
| Role of RNA polymerase II carboxy-terminal domain in coordinating transcription with RNA processing | Q40945481 | ||
| A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome | Q41336121 | ||
| Cotranscriptional spliceosome assembly dynamics and the role of U1 snRNA:5'ss base pairing in yeast | Q41355869 | ||
| Nucleosomes are well positioned in exons and carry characteristic histone modifications | Q41863525 | ||
| Concurrent splicing and transcription are not sufficient to enhance splicing efficiency | Q41936701 | ||
| Heterochromatin protein 1 (HP1a) positively regulates euchromatic gene expression through RNA transcript association and interaction with hnRNPs in Drosophila | Q41951844 | ||
| Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing | Q41999449 | ||
| Perturbation of transcription elongation influences the fidelity of internal exon inclusion in Saccharomyces cerevisiae. | Q42038332 | ||
| Relationship between nucleosome positioning and DNA methylation | Q42151152 | ||
| Biased chromatin signatures around polyadenylation sites and exons | Q42689954 | ||
| Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation | Q43147112 | ||
| The Gcn5 bromodomain of the SAGA complex facilitates cooperative and cross-tail acetylation of nucleosomes | Q43148421 | ||
| Nucleosomes are preferentially positioned at exons in somatic and sperm cells | Q43262911 | ||
| Coordinate regulation of transcription and splicing by steroid receptor coregulators | Q44177314 | ||
| Control of alternative splicing through siRNA-mediated transcriptional gene silencing. | Q45960034 | ||
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | epigenetics | Q26939 |
| P304 | page(s) | 16-26 | |
| P577 | publication date | 2011-01-07 | |
| P1433 | published in | Cell | Q655814 |
| P1476 | title | Epigenetics in alternative pre-mRNA splicing | |
| P478 | volume | 144 |
| Q36300979 | 5-hmC in the brain is abundant in synaptic genes and shows differences at the exon-intron boundary |
| Q36825583 | A New Exon Derived from a Mammalian Apparent LTR Retrotransposon of the SUPT16H Gene |
| Q91787280 | A Review of the Molecular Pathways Involved in Resistance to BRAF Inhibitors in Patients with Advanced-Stage Melanoma |
| Q33718512 | A birth of bipartite exon by intragenic deletion |
| Q35620759 | A chromatin code for alternative splicing involving a putative association between CTCF and HP1α proteins |
| Q36739075 | A conserved role for intragenic DNA methylation in alternative pre-mRNA splicing |
| Q36774430 | A deformation energy-based model for predicting nucleosome dyads and occupancy |
| Q38900677 | A diverse epigenetic landscape at human exons with implication for expression |
| Q43588061 | A genome resource to address mechanisms of developmental programming: determination of the fetal sheep heart transcriptome |
| Q38890099 | A lncRNA regulates alternative splicing via establishment of a splicing-specific chromatin signature. |
| Q34490238 | A multi-exon-skipping detection assay reveals surprising diversity of splice isoforms of spinal muscular atrophy genes |
| Q36289449 | A new link between transcriptional initiation and pre-mRNA splicing: The RNA binding histone variant H2A.B. |
| Q64226578 | ARGLU1 is a transcriptional coactivator and splicing regulator important for stress hormone signaling and development |
| Q38057874 | Aberrant alternative splicing events in Parkinson's disease |
| Q24310234 | Activation of Src and transformation by an RPTPα splice mutant found in human tumours |
| Q35470929 | Active opsin loci adopt intrachromosomal loops that depend on the photoreceptor transcription factor network |
| Q48243613 | Activity-induced histone modifications govern Neurexin-1 mRNA splicing and memory preservation |
| Q36944223 | Adaptive thermal control of stem gravitropism through alternative RNA splicing in Arabidopsis |
| Q36654903 | Advances in tryptophan hydroxylase-2 gene expression regulation: new insights into serotonin-stress interaction and clinical implications |
| Q33822991 | Adventures in time and space: splicing efficiency and RNA polymerase II elongation rate |
| Q24602200 | Air pollution and epigenetics: effects on SP-A and innate host defence in the lung |
| Q34542508 | Alteration of introns in a hyaluronan synthase 1 (HAS1) minigene convert Pre-mRNA [corrected] splicing to the aberrant pattern in multiple myeloma (MM): MM patients harbor similar changes |
| Q35589667 | Alternative RNA splicing and cancer |
| Q57054656 | Alternative Splicing Underappreciated |
| Q64996461 | Alternative Splicing and Protein Diversity: Plants Versus Animals. |
| Q64118972 | Alternative Splicing and Transcription Elongation in Plants |
| Q39803624 | Alternative Splicing of Fibroblast Growth Factor Receptor IgIII Loops in Cancer |
| Q60761608 | Alternative Splicing of the Delta-Opioid Receptor Gene Suggests Existence of New Functional Isoforms |
| Q26864222 | Alternative cleavage and polyadenylation: the long and short of it |
| Q39295240 | Alternative splicing as a regulator of development and tissue identity. |
| Q38157825 | Alternative splicing at the intersection of biological timing, development, and stress responses |
| Q37937382 | Alternative splicing at the right time |
| Q26852848 | Alternative splicing for diseases, cancers, drugs, and databases |
| Q36303822 | Alternative splicing in plants--coming of age. |
| Q58740511 | Alternative splicing links histone modifications to stem cell fate decision |
| Q34680354 | Alternative splicing of human NT5E in cirrhosis and hepatocellular carcinoma produces a negative regulator of ecto-5'-nucleotidase (CD73). |
| Q35089036 | Alternative splicing regulates the expression of G9A and SUV39H2 methyltransferases, and dramatically changes SUV39H2 functions. |
| Q36594260 | Alternative splicing switching in stem cell lineages |
| Q38332474 | Alternative splicing: An important mechanism in stem cell biology |
| Q38079475 | Alternative splicing: a pivotal step between eukaryotic transcription and translation |
| Q36090387 | Alternative splicing: a potential source of functional innovation in the eukaryotic genome |
| Q89861285 | An Alternative Splice Variant of HIPK2 with Intron Retention Contributes to Cytokinesis |
| Q37173219 | An alternative polyadenylation mechanism coopted to the Arabidopsis RPP7 gene through intronic retrotransposon domestication |
| Q99619110 | Arabidopsis exoribonuclease USB1 interacts with the PPR-domain protein SOAR1 to negatively regulate abscisic acid signaling |
| Q45345567 | Argonaute proteins couple chromatin silencing to alternative splicing. |
| Q34480743 | Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells |
| Q36998074 | Aryl hydrocarbon receptor nuclear translocator (ARNT) isoforms control lymphoid cancer cell proliferation through differentially regulating tumor suppressor p53 activity |
| Q47104481 | BRAF inhibitors: resistance and the promise of combination treatments for melanoma |
| Q47281734 | Beyond Transcription: Roles of Transcription Factors in Pre-mRNA Splicing. |
| Q36213117 | Beyond the histone tale: HP1α deregulation in breast cancer epigenetics. |
| Q55226441 | Bioinformatics challenges and perspectives when studying the effect of epigenetic modifications on alternative splicing. |
| Q89239660 | Biological classification with RNA-seq data: Can alternatively spliced transcript expression enhance machine learning classifiers? |
| Q35885025 | Biomedical impact of splicing mutations revealed through exome sequencing |
| Q37681043 | Brahma regulates a specific trans-splicing event at the mod(mdg4) locus of Drosophila melanogaster |
| Q30659498 | Brain feminization requires active repression of masculinization via DNA methylation |
| Q34995772 | Buffering and the evolution of chromosome-wide gene regulation |
| Q41984714 | CRE promoter sites modulate alternative splicing via p300-mediated histone acetylation |
| Q28249503 | CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing |
| Q34581100 | Calcium-mediated histone modifications regulate alternative splicing in cardiomyocytes. |
| Q90658156 | Cell-specific exon methylation and CTCF binding in neurons regulate calcium ion channel splicing and function |
| Q88817040 | Chromatin and Genomic determinants of alternative splicing |
| Q41573182 | Chromatin assembly on herpes simplex virus 1 DNA early during a lytic infection is Asf1a dependent |
| Q36368843 | Chromatin modification by SUMO-1 stimulates the promoters of translation machinery genes |
| Q35229482 | Chromatin proteomic profiling reveals novel proteins associated with histone-marked genomic regions |
| Q41946063 | Chromatin structure and pre-mRNA processing work together |
| Q38126379 | Chromatin's thread to alternative splicing regulation |
| Q28081880 | Chromatin, DNA structure and alternative splicing |
| Q39681528 | Chromatin: a key player in complex gene regulation and future cancer therapeutics. |
| Q24632812 | Chromatin: constructing the big picture |
| Q21999524 | Chronic cocaine-regulated epigenomic changes in mouse nucleus accumbens. |
| Q30429353 | Co-detection and sequencing of genes and transcripts from the same single cells facilitated by a microfluidics platform |
| Q36019901 | Co-transcriptional regulation of alternative pre-mRNA splicing |
| Q57279723 | Colocalization analyses of genomic elements: approaches, recommendations and challenges |
| Q34126698 | Combinations of histone modifications mark exon inclusion levels |
| Q92025174 | Combinatorial control of Spo11 alternative splicing by modulation of RNA polymerase II dynamics and splicing factor recruitment during meiosis |
| Q58454175 | Complexities of 5'splice site definition: Implications in clinical analyses |
| Q38157823 | Complexity of the alternative splicing landscape in plants. |
| Q38644504 | Comprehensive analysis of nucleocytoplasmic dynamics of mRNA in Drosophila cells |
| Q58052281 | Computational Modeling Under Uncertainty: Challenges and Opportunities |
| Q37631875 | Computational analysis reveals a correlation of exon-skipping events with splicing, transcription and epigenetic factors |
| Q36441240 | Connecting the dots: chromatin and alternative splicing in EMT. |
| Q92325277 | Constitutive splicing and economies of scale in gene expression |
| Q38125889 | Control of neuronal voltage-gated calcium ion channels from RNA to protein |
| Q34038245 | Control of transcriptional elongation |
| Q38973004 | Cotranscriptional histone H2B monoubiquitylation is tightly coupled with RNA polymerase II elongation rate |
| Q39663252 | Counting on co-transcriptional splicing |
| Q27024720 | Coupling pre-mRNA processing to transcription on the RNA factory assembly line |
| Q34803391 | CpG islands under selective pressure are enriched with H3K4me3, H3K27ac and H3K36me3 histone modifications |
| Q27675292 | Crystal structure and functional characterization of the human RBM25 PWI domain and its flanking basic region |
| Q24309463 | DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation |
| Q41836697 | DNA hypermethylation of alternatively spliced and repeat sequences in humans |
| Q35569780 | DNA methylation and chromatin organization in insects: insights from the Ant Camponotus floridanus |
| Q35882577 | DNA methylation dynamics, metabolic fluxes, gene splicing, and alternative phenotypes in honey bees |
| Q35017709 | DNA methylation within the I.4 promoter region correlates with CYPl19A1 gene expression in human ex vivo mature omental and subcutaneous adipocytes. |
| Q35227085 | DNA-Encoded Chromatin Structural Intron Boundary Signals Identify Conserved Genes with Common Function. |
| Q40174850 | DNA-methylation effect on cotranscriptional splicing is dependent on GC architecture of the exon-intron structure |
| Q34463554 | DNMT3A in haematological malignancies |
| Q34352768 | DNase I-hypersensitive exons colocalize with promoters and distal regulatory elements |
| Q49719519 | DRD2 promoter methylation and measures of alcohol reward: functional activation of reward circuits and clinical severity. |
| Q35911735 | Dark matter RNA: an intelligent scaffold for the dynamic regulation of the nuclear information landscape |
| Q35970681 | Deciphering the plant splicing code: experimental and computational approaches for predicting alternative splicing and splicing regulatory elements |
| Q47112458 | Deep learning of the splicing (epi)genetic code reveals a novel candidate mechanism linking histone modifications to ESC fate decision |
| Q28077564 | Defective control of pre-messenger RNA splicing in human disease |
| Q36354822 | Defective histone supply causes changes in RNA polymerase II elongation rate and cotranscriptional pre-mRNA splicing |
| Q39998735 | Depolarization-mediated regulation of alternative splicing |
| Q35632594 | Differential patterns of intronic and exonic DNA regions with respect to RNA polymerase II occupancy, nucleosome density and H3K36me3 marking in fission yeast |
| Q35926424 | Differential pre-mRNA Splicing Alters the Transcript Diversity of Helitrons Between the Maize Inbred Lines |
| Q34723952 | Differential transcript isoform usage pre- and post-zygotic genome activation in zebrafish |
| Q39432488 | Do social insects support Haig's kin theory for the evolution of genomic imprinting? |
| Q64114125 | Does co-transcriptional regulation of alternative splicing mediate plant stress responses? |
| Q89967443 | Dynamic Alternative Splicing During Mouse Preimplantation Embryo Development |
| Q26852632 | Dynamic integration of splicing within gene regulatory pathways |
| Q36550804 | Dysregulated A to I RNA editing and non-coding RNAs in neurodegeneration |
| Q47222829 | Dysregulation of cotranscriptional alternative splicing underlies CHARGE syndrome |
| Q34595859 | E-cadherin gene re-expression in chronic lymphocytic leukemia cells by HDAC inhibitors |
| Q92492912 | EWS-FLI1 modulated alternative splicing of ARID1A reveals novel oncogenic function through the BAF complex |
| Q27938954 | Eaf5/7/3 form a functionally independent NuA4 submodule linked to RNA polymerase II-coupled nucleosome recycling |
| Q38708761 | Effect of histone modifications on hMLH1 alternative splicing in gastric cancer |
| Q33580782 | Effects of RNAi-mediated knockdown of histone methyltransferases on the sex-specific mRNA expression of Imp in the silkworm Bombyx mori |
| Q35090561 | Effects of schizophrenia risk variation in the NRG1 gene on NRG1-IV splicing during fetal and early postnatal human neocortical development. |
| Q38978757 | Elastin structure and its involvement in skin photoageing. |
| Q64238782 | Emerging Roles of LSM Complexes in Posttranscriptional Regulation of Plant Response to Abiotic Stress |
| Q92513205 | Emerging roles of histone modifications and HDACs in RNA splicing |
| Q35063756 | Epidermal growth-factor-induced transcript isoform variation drives mammary cell migration |
| Q64076622 | Epigenetic Regulation of mRNA Polyadenylation Site Selection |
| Q37593048 | Epigenetic dysregulation of SHANK3 in brain tissues from individuals with autism spectrum disorders |
| Q36816991 | Epigenetic mechanisms of drug addiction |
| Q22251252 | Epigenetic mechanisms of drug addiction |
| Q37962586 | Epigenetic modulation: a novel therapeutic target for overcoming hormonal therapy resistance |
| Q98467121 | Epigenetic plasticity in metastatic dormancy: mechanisms and therapeutic implications |
| Q99565367 | Epigenetic regulation of osteopontin splicing isoform c defines its role as a microenvironmental factor to promote the survival of colon cancer cells from 5-FU treatment |
| Q53839626 | Epigenetic regulation of placental gene expression in transcriptional subtypes of preeclampsia. |
| Q27016161 | Epigenetic virtues of chromodomains |
| Q54096809 | Epigenetics at the base of alternative splicing changes that promote colorectal cancer. |
| Q37871545 | Epigenetics in C. elegans: facts and challenges |
| Q28077082 | Epigenetics in Cancer: A Hematological Perspective |
| Q50437564 | Epigenetics of Huntington's Disease. |
| Q33651809 | Epigenomics and the concept of degeneracy in biological systems |
| Q38366355 | Exon 11 skipping of E-cadherin RNA downregulates its expression in head and neck cancer cells |
| Q35245160 | Exon skipping event prediction based on histone modifications. |
| Q36620461 | Expression of human CAR splicing variants in BAC-transgenic mice |
| Q35759432 | Expression of mouse Dab2ip transcript variants and gene methylation during brain development. |
| Q34685755 | Extensive alternative splicing of the repressor element silencing transcription factor linked to cancer |
| Q35608609 | Facioscapulohumeral muscular dystrophy as a model for epigenetic regulation and disease |
| Q39256785 | Faulty RNA splicing: consequences and therapeutic opportunities in brain and muscle disorders. |
| Q35577991 | Flickin' the ubiquitin switch: the role of H2B ubiquitylation in development |
| Q34419563 | Friends with social benefits: host-microbe interactions as a driver of brain evolution and development? |
| Q58862336 | From “Cellular” RNA to “Smart” RNA: Multiple Roles of RNA in Genome Stability and Beyond |
| Q34632366 | Functional consequences of developmentally regulated alternative splicing |
| Q89238692 | Gene Regulatory Network Perturbation by Genetic and Epigenetic Variation |
| Q34471361 | Gene body methylation can alter gene expression and is a therapeutic target in cancer. |
| Q35235099 | Genetic interaction mapping reveals a role for the SWI/SNF nucleosome remodeler in spliceosome activation in fission yeast |
| Q48177933 | Genetic, epigenetic and exogenetic information in development and evolution. |
| Q50457104 | Genome-Wide Analysis of Heat-Sensitive Alternative Splicing in Physcomitrella patens. |
| Q46295491 | Genome-wide analysis of SU(VAR)3-9 distribution in chromosomes of Drosophila melanogaster |
| Q28651125 | Genome-wide analysis of alternative splicing in Volvox carteri |
| Q33745699 | Genome-wide analysis of light-regulated alternative splicing mediated by photoreceptors in Physcomitrella patens |
| Q38940268 | Genome-wide identification of splicing QTLs in the human brain and their enrichment among schizophrenia-associated loci. |
| Q38061014 | Genomic analysis reveals novel connections between alternative splicing and circadian regulatory networks. |
| Q35900013 | Global DNA methylation changes and differential gene expression in Anaplasma phagocytophilum-infected human neutrophils |
| Q46912463 | Global dissection of alternative splicing in paleopolyploid soybean |
| Q35561948 | Global variability in gene expression and alternative splicing is modulated by mitochondrial content |
| Q37707897 | H2B ubiquitylation modulates spliceosome assembly and function in budding yeast |
| Q33878912 | H3K4 demethylase KDM5B regulates global dynamics of transcription elongation and alternative splicing in embryonic stem cells |
| Q34481889 | HP1a recruitment to promoters is independent of H3K9 methylation in Drosophila melanogaster |
| Q36496589 | Herpesviral ICP0 Protein Promotes Two Waves of Heterochromatin Removal on an Early Viral Promoter during Lytic Infection |
| Q28480856 | High resolution methylome map of rat indicates role of intragenic DNA methylation in identification of coding region |
| Q33705782 | Highly sensitive and multiplexed quantification of mRNA splice variants by the direct ligation of DNA probes at the exon junction and universal PCR amplification. |
| Q92686725 | Histone 2B monoubiquitination complex integrates transcript elongation with RNA processing at circadian clock and flowering regulators |
| Q36388005 | Histone H3 lysine 36 methylation affects temperature-induced alternative splicing and flowering in plants |
| Q36827115 | Histone H3K36 methylation regulates pre-mRNA splicing in Saccharomyces cerevisiae |
| Q38343838 | Histone exchange, chromatin structure and the regulation of transcription |
| Q36191378 | Histone hyperacetylation and exon skipping: a calcium-mediated dynamic regulation in cardiomyocytes |
| Q28263573 | Histone methylation: a dynamic mark in health, disease and inheritance |
| Q47927828 | Histone methyltransferase SETD2 modulates alternative splicing to inhibit intestinal tumorigenesis |
| Q35182079 | Histone modifications are associated with transcript isoform diversity in normal and cancer cells |
| Q24293198 | Histone variant H2A.Bbd is associated with active transcription and mRNA processing in human cells |
| Q64279800 | HnRNPL inhibits the osteogenic differentiation of PDLCs stimulated by SrCl through repressing Setd2 |
| Q38265600 | How mRNA is misspliced in acute myelogenous leukemia (AML)? |
| Q91272551 | How the epigenome integrates information and reshapes the synapse |
| Q35202794 | Hu proteins regulate alternative splicing by inducing localized histone hyperacetylation in an RNA-dependent manner |
| Q89286707 | Identification and expression of alternatively spliced novel isoforms of cancer associated MYD88 lacking death domain in mouse |
| Q34712017 | Identification by high-throughput imaging of the histone methyltransferase EHMT2 as an epigenetic regulator of VEGFA alternative splicing |
| Q51561948 | Identification of differentially expressed three novel transcript variants of mouse ARNT gene. |
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| Q37851045 | InTRONs in biotech |
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| Q37962775 | Integrating transcription kinetics with alternative polyadenylation and cell cycle control. |
| Q55439406 | Integration of proteomic and transcriptomic profiles reveals multiple levels of genetic regulation of salt tolerance in cotton. |
| Q52582426 | Integrative analysis reveals functional and regulatory roles of H3K79me2 in mediating alternative splicing. |
| Q36958121 | Interconnections Between RNA-Processing Pathways Revealed by a Sequencing-Based Genetic Screen for Pre-mRNA Splicing Mutants in Fission Yeast |
| Q88547227 | Interferon regulatory factor 1 and a variant of heterogeneous nuclear ribonucleoprotein L coordinately silence the gene for adhesion protein CEACAM1 |
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| Q42191451 | Is central dogma a global property of cellular information flow? |
| Q36810277 | Isoform switching and exon skipping induced by the DNA methylation inhibitor 5-Aza-2'-deoxycytidine |
| Q55421225 | Key Transport and Ammonia Recycling Genes Involved in Aphid Symbiosis Respond to Host-Plant Specialization. |
| Q35447539 | Key features of the two-intron Saccharomyces cerevisiae gene SUS1 contribute to its alternative splicing |
| Q30428436 | Knockdown of menin affects pre-mRNA processing and promoter fidelity at the interferon-gamma inducible IRF1 gene |
| Q41941464 | Let there be light: regulation of gene expression in plants. |
| Q28602218 | Linking Genes to Cardiovascular Diseases: Gene Action and Gene-Environment Interactions |
| Q37324755 | Live-cell single-molecule tracking reveals co-recognition of H3K27me3 and DNA targets polycomb Cbx7-PRC1 to chromatin |
| Q35940978 | Long Noncoding RNA-Directed Epigenetic Regulation of Gene Expression Is Associated With Anxiety-like Behavior in Mice |
| Q30373903 | Long lasting control of viral rebound with a new drug ABX464 targeting Rev - mediated viral RNA biogenesis. |
| Q36072603 | Long range chromatin organization: a new layer in splicing regulation? |
| Q89338113 | MBNL splicing activity depends on RNA binding site structural context |
| Q37264089 | MRG15 is required for pre-mRNA splicing and spermatogenesis |
| Q37142651 | Maintenance of interphase chromosome compaction and homolog pairing in Drosophila is regulated by the condensin cap-h2 and its partner Mrg15. |
| Q33825770 | MeCP2 regulates Tet1-catalyzed demethylation, CTCF binding, and learning-dependent alternative splicing of the BDNF gene in Turtle |
| Q34467642 | Mechanisms and Regulation of Alternative Pre-mRNA Splicing |
| Q26852702 | Mechanisms and consequences of alternative polyadenylation |
| Q90753130 | Mechanisms of Neuronal Alternative Splicing and Strategies for Therapeutic Interventions |
| Q26853658 | Mechanisms of functional promiscuity by HP1 proteins |
| Q36005683 | Mechanisms of the androgen receptor splicing in prostate cancer cells |
| Q36014281 | MiasDB: A Database of Molecular Interactions Associated with Alternative Splicing of Human Pre-mRNAs |
| Q28552209 | Misregulation of Alternative Splicing in a Mouse Model of Rett Syndrome |
| Q34055243 | Modelling reveals kinetic advantages of co-transcriptional splicing |
| Q33590301 | Modulation the alternative splicing of GLA (IVS4+919G>A) in Fabry disease |
| Q37865814 | More than a splicing code: integrating the role of RNA, chromatin and non-coding RNA in alternative splicing regulation. |
| Q26825096 | Mutual interdependence of splicing and transcription elongation |
| Q47972361 | Natural antisense RNAs are involved in the regulation of CD45 expression in autoimmune diseases |
| Q41050605 | New Insights into 5hmC DNA Modification: Generation, Distribution and Function |
| Q30593939 | New insights from existing sequence data: generating breakthroughs without a pipette |
| Q34550417 | Next-Generation Sequencing in Oncology: Genetic Diagnosis, Risk Prediction and Cancer Classification. |
| Q35869261 | Non-sequential and multi-step splicing of the dystrophin transcript. |
| Q41337086 | Noncoding RNA-regulated gain-of-function of STOX2 in Finnish pre-eclamptic families |
| Q37709333 | Notch signaling: switching an oncogene to a tumor suppressor. |
| Q35056295 | Ott1 (Rbm15) regulates thrombopoietin response in hematopoietic stem cells through alternative splicing of c-Mpl |
| Q46107885 | Overexpression of Histone Deacetylase and Amyloid Precursor Protein in Hepatocellular Carcinoma |
| Q27312184 | Oxidative Stress Triggers Body-Wide Skipping of Multiple Exons of the Spinal Muscular Atrophy Gene |
| Q34970694 | PGC1α -1 Nucleosome Position and Splice Variant Expression and Cardiovascular Disease Risk in Overweight and Obese Individuals |
| Q36023229 | POF regulates the expression of genes on the fourth chromosome in Drosophila melanogaster by binding to nascent RNA |
| Q98906690 | Pathogenic impact of transcript isoform switching in 1,209 cancer samples covering 27 cancer types using an isoform-specific interaction network |
| Q36754746 | Patterning and regulatory associations of DNA methylation are mirrored by histone modifications in insects |
| Q45348850 | Persistent detection of alternatively spliced BCR-ABL variant results in a failure to achieve deep molecular response |
| Q27313223 | Perturbation of chromatin structure globally affects localization and recruitment of splicing factors |
| Q47102643 | Phosphoproteomics of cAMP signaling of Bordetella adenylate cyclase toxin in mouse dendritic cells |
| Q41880113 | Phosphoproteomics screen reveals akt isoform-specific signals linking RNA processing to lung cancer. |
| Q90429642 | Plasmid-based gap-repair recombineered transgenes reveal a central role for introns in mutually exclusive alternative splicing in Down Syndrome Cell Adhesion Molecule exon 4 |
| Q42212098 | Polyadenylation of Friend murine leukemia virus env-mRNA is affected by its splicing |
| Q55279279 | Position-specific intron retention is mediated by the histone methyltransferase SDG725. |
| Q36398266 | Post-transcriptional regulation in cancer progression : Microenvironmental control of alternative splicing and translation |
| Q37621927 | Posttranslational regulation of self-renewal capacity: insights from proteome and phosphoproteome analyses of stem cell leukemia |
| Q36194662 | Pre-mRNA Processing Factor Prp18 Is a Stimulatory Factor of Influenza Virus RNA Synthesis and Possesses Nucleoprotein Chaperone Activity |
| Q34551455 | Pre-mRNA splicing is a determinant of nucleosome organization |
| Q37868141 | Pre-mRNA splicing: where and when in the nucleus |
| Q37078868 | Progressive impairment of muscle regeneration in muscleblind-like 3 isoform knockout mice. |
| Q34276472 | Psip1/Ledgf p52 binds methylated histone H3K36 and splicing factors and contributes to the regulation of alternative splicing |
| Q34579243 | Purifying selection on splice-related motifs, not expression level nor RNA folding, explains nearly all constraint on human lincRNAs |
| Q29620033 | RAF inhibitor resistance is mediated by dimerization of aberrantly spliced BRAF(V600E) |
| Q38852154 | RNA Dynamics in the Control of Circadian Rhythm |
| Q50645951 | RNA Pol II Dynamics Modulate Co-transcriptional Chromatin Modification, CTD Phosphorylation, and Transcriptional Direction. |
| Q41940904 | RNA Polymerase II Elongation at the Crossroads of Transcription and Alternative Splicing |
| Q33858687 | RNA Splicing Factors and RNA-Directed DNA Methylation. |
| Q40884810 | RNA driving the epigenetic bus. |
| Q37997897 | RNA polymerase II transcription on the fast lane |
| Q37391660 | RNA splicing factors as oncoproteins and tumour suppressors |
| Q38155497 | RNA splicing: a new player in the DNA damage response |
| Q37882854 | RNA splicing: disease and therapy |
| Q34284546 | RNA-Seq and human complex diseases: recent accomplishments and future perspectives. |
| Q47704101 | RNA-seq analysis reveals alternative splicing under salt stress in cotton, Gossypium davidsonii |
| Q88683864 | Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome |
| Q64055999 | Recent advances in the characterization of plant transcriptomes in response to drought, salinity, heat, and cold stress |
| Q26863751 | Recent developments in myofibroblast biology: paradigms for connective tissue remodeling |
| Q34999412 | Redox-based epigenetic status in drug addiction: a potential contributor to gene priming and a mechanistic rationale for metabolic intervention |
| Q52836988 | Regional DNA methylation differences between humans and chimpanzees are associated with genetic changes, transcriptional divergence and disease genes. |
| Q26861955 | Regulated pre-mRNA splicing: the ghostwriter of the eukaryotic genome |
| Q48946249 | Regulating mRNA complexity in the mammalian brain. |
| Q91786756 | Regulation of Age-related Decline by Transcription Factors and Their Crosstalk with the Epigenome |
| Q38949799 | Regulation of BCL-X splicing reveals a role for the polypyrimidine tract binding protein (PTBP1/hnRNP I) in alternative 5' splice site selection |
| Q38858919 | Regulation of Tissue-Specific Alternative Splicing: C. elegans as a Model System |
| Q26999239 | Regulation of alternative splicing by local histone modifications: potential roles for RNA-guided mechanisms |
| Q38324240 | Regulation of alternative splicing by the circadian clock and food related cues |
| Q37648778 | Regulation of mRNA splicing by MeCP2 via epigenetic modifications in the brain |
| Q38092678 | Regulation of splicing by SR proteins and SR protein-specific kinases |
| Q37684657 | Regulatory landscape and clinical implication of MBD3 in human malignant glioma. |
| Q35113558 | Relationship between nucleosome positioning and progesterone-induced alternative splicing in breast cancer cells |
| Q55003080 | Role of epigenetic factors in the selection of the alternative splicing isoforms of human KRAS in colorectal cancer cell lines. |
| Q36060128 | Role of the Long Non-Coding RNA MAPT-AS1 in Regulation of Microtubule Associated Protein Tau (MAPT) Expression in Parkinson's Disease. |
| Q42555454 | Roles of histone deacetylases in epigenetic regulation: emerging paradigms from studies with inhibitors |
| Q24298821 | SKIP counteracts p53-mediated apoptosis via selective regulation of p21Cip1 mRNA splicing |
| Q39115667 | SR Proteins: Binders, Regulators, and Connectors of RNA. |
| Q34065060 | SWI/SNF regulates the alternative processing of a specific subset of pre-mRNAs in Drosophila melanogaster |
| Q34294075 | Sensing the environment: regulation of local and global homeostasis by the skin's neuroendocrine system |
| Q35100314 | Sex determination in insects: a binary decision based on alternative splicing. |
| Q61443584 | Sexual dimorphism in brain transcriptomes of Amami spiny rats (Tokudaia osimensis): a rodent species where males lack the Y chromosome |
| Q58560872 | Short and narrow flag leaf1, a GATA zinc finger domain-containing protein, regulates flag leaf size in rice (Oryza sativa) |
| Q26765946 | Small RNAs: essential regulators of gene expression and defenses against environmental stresses in plants |
| Q35672134 | Son maintains accurate splicing for a subset of human pre-mRNAs |
| Q38008396 | Spatial Organization and Dynamics of Transcription Elongation and Pre-mRNA Processing in Live Cells. |
| Q27006500 | Splice isoforms as therapeutic targets for colorectal cancer |
| Q42106564 | SpliceAid-F: a database of human splicing factors and their RNA-binding sites |
| Q36967122 | Spliceosome mutations exhibit specific associations with epigenetic modifiers and proto-oncogenes mutated in myelodysplastic syndrome |
| Q26798148 | Splicing Regulation: A Molecular Device to Enhance Cancer Cell Adaptation |
| Q39500409 | Splicing enhances recruitment of methyltransferase HYPB/Setd2 and methylation of histone H3 Lys36. |
| Q38187632 | Splicing factor mutations and cancer |
| Q39999542 | Splicing of Nascent RNA Coincides with Intron Exit from RNA Polymerase II. |
| Q35113616 | Splicing of designer exons informs a biophysical model for exon definition |
| Q42095047 | Splicing of many human genes involves sites embedded within introns |
| Q50098862 | Splicing regulation by long noncoding RNAs. |
| Q28593622 | Splicing switch of an epigenetic regulator by RNA helicases promotes tumor-cell invasiveness |
| Q58093155 | Statistical inference of the rate of RNA polymerase II elongation by total RNA sequencing |
| Q35113601 | Stress-induced endogenous siRNAs targeting regulatory intron sequences in Brachypodium. |
| Q42071505 | Switch-like regulation of tissue-specific alternative pre-mRNA processing patterns revealed by customized fluorescence reporters |
| Q36263400 | Systematic Mapping of RNA-Chromatin Interactions In Vivo. |
| Q35212538 | Systematic discovery of regulated and conserved alternative exons in the mammalian brain reveals NMD modulating chromatin regulators |
| Q35133477 | TBX3 regulates splicing in vivo: a novel molecular mechanism for Ulnar-mammary syndrome |
| Q40871398 | TCERG1 regulates alternative splicing of the Bcl-x gene by modulating the rate of RNA polymerase II transcription. |
| Q43206259 | TINTIN, at the interface of chromatin, transcription elongation, and mRNA processing |
| Q99418746 | Targeting the epigenetic regulation of antitumour immunity |
| Q30557271 | The C-terminal domain of Brd2 is important for chromatin interaction and regulation of transcription and alternative splicing. |
| Q47221632 | The Importance of ncRNAs as Epigenetic Mechanisms in Phenotypic Variation and Organic Evolution |
| Q57491556 | The Krebs Cycle Connection: Reciprocal Influence Between Alternative Splicing Programs and Cell Metabolism |
| Q26747254 | The Metabolic Impact on Histone Acetylation and Transcription in Ageing |
| Q34303212 | The RNA polymerase II CTD coordinates transcription and RNA processing. |
| Q37138675 | The Y chromosome as a regulatory element shaping immune cell transcriptomes and susceptibility to autoimmune disease |
| Q36197666 | The adipogenic transcriptional cofactor ZNF638 interacts with splicing regulators and influences alternative splicing |
| Q44398735 | The cell biology of genomes: bringing the double helix to life. |
| Q37873983 | The central role of RNA in human development and cognition |
| Q38679766 | The determinants of alternative RNA splicing in human cells. |
| Q34342920 | The exon junction complex controls transposable element activity by ensuring faithful splicing of the piwi transcript. |
| Q50753040 | The function of intragenic DNA methylation: insights from insect epigenomes. |
| Q38172436 | The functional consequences of intron retention: alternative splicing coupled to NMD as a regulator of gene expression |
| Q90006424 | The importance of DNA methylation of exons on alternative splicing |
| Q52719643 | The intracerebral hemorrhage blood transcriptome in humans differs from the ischemic stroke and vascular risk factor control blood transcriptomes. |
| Q35074663 | The nucleosome regulates the usage of polyadenylation sites in the human genome |
| Q36410173 | The pathogenicity of splicing defects: mechanistic insights into pre-mRNA processing inform novel therapeutic approaches |
| Q42282317 | The role of alternative splicing in cancer |
| Q38239862 | The role of chromatin dynamics in immune cell development |
| Q36227863 | The spliceosome U2 snRNP factors promote genome stability through distinct mechanisms; transcription of repair factors and R-loop processing |
| Q38057608 | The spliceosome as a target of novel antitumour drugs |
| Q35970320 | The spliceosome-activating complex: molecular mechanisms underlying the function of a pleiotropic regulator |
| Q35671874 | The trajectory of life. Decreasing physiological network complexity through changing fractal patterns |
| Q39787845 | The translational landscape of the splicing factor SRSF1 and its role in mitosis. |
| Q30945159 | The variation game: Cracking complex genetic disorders with NGS and omics data |
| Q40150714 | There is a world beyond protein mutations: the role of non-coding RNAs in melanomagenesis |
| Q30553128 | Tissue-specific and SRSF1-dependent splicing of fibronectin, a matrix protein that controls host cell invasion |
| Q35641934 | Tracking intron removal in real time |
| Q57331942 | Trans-Ethnic Mapping of Identifies Two Independent SLE-Risk Linkage Groups Enriched for Co-Transcriptional Splicing Marks |
| Q33556144 | Transcription of angiogenin and ribonuclease 4 is regulated by RNA polymerase III elements and a CCCTC binding factor (CTCF)-dependent intragenic chromatin loop |
| Q42705161 | Transcriptome analysis of hypoxic cancer cells uncovers intron retention in EIF2B5 as a mechanism to inhibit translation |
| Q34162566 | Transcriptome analysis of the model protozoan, Tetrahymena thermophila, using Deep RNA sequencing |
| Q39733187 | Transcriptome-Wide Analysis Reveals Modulation of Human Macrophage Inflammatory Phenotype Through Alternative Splicing |
| Q43451548 | Transcriptome-wide expression variation associated with environmental plasticity and mating success in cactophilic Drosophila mojavensis |
| Q38958002 | Translational research in neuroendocrine tumors: pitfalls and opportunities |
| Q24297433 | USP49 deubiquitinates histone H2B and regulates cotranscriptional pre-mRNA splicing |
| Q91826178 | Understanding aberrant RNA splicing to facilitate cancer diagnosis and therapy |
| Q30866842 | Understanding gene regulatory mechanisms by integrating ChIP-seq and RNA-seq data: statistical solutions to biological problems |
| Q34354780 | Understanding the regulatory and transcriptional complexity of the genome through structure |
| Q43159836 | Unexpected selection to retain high GC content and splicing enhancers within exons of multiexonic lncRNA loci |
| Q41345618 | Unique role of SRSF2 in transcription activation and diverse functions of the SR and hnRNP proteins in gene expression regulation |
| Q37937061 | Unraveling the glioma epigenome: from molecular mechanisms to novel biomarkers and therapeutic targets |
| Q37978586 | Unscrambling genetic information at the RNA level |
| Q36642277 | Using an exon microarray to identify a global profile of gene expression and alternative splicing in K562 cells exposed to sodium valproate |
| Q91912219 | Using secondary structure to predict the effects of genetic variants on alternative splicing |
| Q38601979 | Variation in DNA Methylation Is Not Consistently Reflected by Sociality in Hymenoptera. |
| Q36587843 | Widespread RNA binding by chromatin-associated proteins |
| Q47208524 | Zinc Deficiency via a Splice Switch in Zinc Importer ZIP2/SLC39A2 Causes Cystic Fibrosis-Associated MUC5AC Hypersecretion in Airway Epithelial Cells |
| Q52765902 | [Pre-mRNA splicing: when the spliceosome loses ground]. |
| Q47103256 | cFLIP critically modulates apoptotic resistance in epithelial-to-mesenchymal transition |
| Q30647275 | diffReps: detecting differential chromatin modification sites from ChIP-seq data with biological replicates |
| Q37424880 | mRNA changes in nucleus accumbens related to methamphetamine addiction in mice |
| Q51151318 | mRNA expression and DNA methylation in three key genes involved in caste differentiation in female honeybees (Apis mellifera). |
| Q30698709 | rSeqDiff: detecting differential isoform expression from RNA-Seq data using hierarchical likelihood ratio test |
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