| scholarly article | Q13442814 |
| P2093 | author name string | Yue He | |
| Connie M Weaver | |||
| David W Powell | |||
| P Anthony Weil | |||
| Andrew J Link | |||
| Jennifer L Jennings | |||
| K Jill McAfee | |||
| P2860 | cites work | Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones | Q34184058 |
| Components of the SAGA histone acetyltransferase complex are required for repressed transcription of ARG1 in rich medium | Q34281088 | ||
| Charting the protein complexome in yeast by mass spectrometry. | Q34719856 | ||
| Histone acetyltransferase activity of yeast Gcn5p is required for the activation of target genes in vivo | Q35192911 | ||
| Chromatin structure and transcription | Q35237465 | ||
| Redundant roles for the TFIID and SAGA complexes in global transcription | Q38311191 | ||
| Experimental analysis of chromatin function in transcription control. | Q40516092 | ||
| Inhibition of transcription selectively reduces the level of ubiquitinated histone H2B in chromatin | Q41447559 | ||
| The SAGA unfolds: convergence of transcription regulators in chromatin-modifying complexes. | Q42459431 | ||
| Vectors and gene targeting modules for tandem affinity purification in Schizosaccharomyces pombe | Q43592539 | ||
| SWI/SNF complexes and facilitation of TATA binding protein:nucleosome interactions. | Q52531872 | ||
| Energy-dependent chromatin remodelers: complex complexes and their components. | Q52532494 | ||
| Transcription-linked acetylation by Gcn5p of histones H3 and H4 at specific lysines | Q59051030 | ||
| Identification of native complexes containing the yeast coactivator/repressor proteins NGG1/ADA3 and ADA2 | Q73084666 | ||
| Functional organization of the yeast proteome by systematic analysis of protein complexes | Q24292209 | ||
| Acetylation of histones and transcription-related factors | Q24548503 | ||
| Cluster analysis and display of genome-wide expression patterns | Q24644463 | ||
| The language of covalent histone modifications | Q27860931 | ||
| Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry | Q27861116 | ||
| Differential requirement of SAGA components for recruitment of TATA-box-binding protein to promoters in vivo | Q27930390 | ||
| Functional organization of the yeast SAGA complex: distinct components involved in structural integrity, nucleosome acetylation, and TATA-binding protein interaction. | Q27930736 | ||
| Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry | Q27931371 | ||
| ADR1 activation domains contact the histone acetyltransferase GCN5 and the core transcriptional factor TFIIB. | Q27931384 | ||
| Transcriptional activation via sequential histone H2B ubiquitylation and deubiquitylation, mediated by SAGA-associated Ubp8. | Q27933975 | ||
| The novel SLIK histone acetyltransferase complex functions in the yeast retrograde response pathway. | Q27934606 | ||
| Analysis of Spt7 function in the Saccharomyces cerevisiae SAGA coactivator complex. | Q27934769 | ||
| Yeast Gcn5 functions in two multisubunit complexes to acetylate nucleosomal histones: characterization of an Ada complex and the SAGA (Spt/Ada) complex | Q27934812 | ||
| SALSA, a variant of yeast SAGA, contains truncated Spt7, which correlates with activated transcription | Q27936016 | ||
| Gcn5p is involved in the acetylation of histone H3 in nucleosomes. | Q27936257 | ||
| A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation | Q27936635 | ||
| The ATM-related cofactor Tra1 is a component of the purified SAGA complex | Q27937594 | ||
| Inhibition of TATA-binding protein function by SAGA subunits Spt3 and Spt8 at Gcn4-activated promoters | Q27938704 | ||
| Role of the Ada2 and Ada3 transcriptional coactivators in histone acetylation | Q27939467 | ||
| Tra1p is a component of the yeast Ada.Spt transcriptional regulatory complexes. | Q27939931 | ||
| The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4. | Q27940298 | ||
| Dissecting the regulatory circuitry of a eukaryotic genome | Q28131632 | ||
| Open source clustering software | Q29547702 | ||
| Methylation of histone H4 at arginine 3 facilitating transcriptional activation by nuclear hormone receptor | Q29614530 | ||
| Cooperation between complexes that regulate chromatin structure and transcription | Q29614769 | ||
| Direct analysis of protein complexes using mass spectrometry | Q29617450 | ||
| Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome | Q29618064 | ||
| Involvement of histone methylation and phosphorylation in regulation of transcription by thyroid hormone receptor | Q30453299 | ||
| Deubiquitination of histone H2B by a yeast acetyltransferase complex regulates transcription. | Q33195734 | ||
| Chromatin-modifying and -remodeling complexes | Q33632339 | ||
| Signaling to chromatin through histone modifications: how clear is the signal? | Q33671512 | ||
| Histone acetyltransferase activity and interaction with ADA2 are critical for GCN5 function in vivo. | Q33886079 | ||
| Analysis of nucleosome disruption by ATP-driven chromatin remodeling complexes | Q33914680 | ||
| Essential functional interactions of SAGA, a Saccharomyces cerevisiae complex of Spt, Ada, and Gcn5 proteins, with the Snf/Swi and Srb/mediator complexes | Q33970848 | ||
| P433 | issue | 16 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | cell biology | Q7141 |
| mass spectrometry | Q180809 | ||
| cluster analysis | Q622825 | ||
| SAGA histone acetyltransferase complex subunit SGF11 YPL047W | Q27549943 | ||
| P304 | page(s) | 7249-59 | |
| P577 | publication date | 2004-08-01 | |
| P1433 | published in | Molecular and Cellular Biology | Q3319478 |
| P1476 | title | Cluster analysis of mass spectrometry data reveals a novel component of SAGA | |
| P478 | volume | 24 |
| Q27932596 | A SAGA-independent function of SPT3 mediates transcriptional deregulation in a mutant of the Ccr4-not complex in Saccharomyces cerevisiae |
| Q24307408 | A TFTC/STAGA module mediates histone H2A and H2B deubiquitination, coactivates nuclear receptors, and counteracts heterochromatin silencing |
| Q34931851 | A complex-based reconstruction of the Saccharomyces cerevisiae interactome |
| Q45844627 | A global proteome study of Mycobacterium gilvum PYR-GCK grown on pyrene and glucose reveals the activation of glyoxylate, shikimate and gluconeogenetic pathways through the central carbon metabolism highway |
| Q37994551 | ATAC-king the complexity of SAGA during evolution |
| Q27935737 | Activation of the ADE genes requires the chromatin remodeling complexes SAGA and SWI/SNF |
| Q36082780 | An astrocyte-specific proteomic approach to inflammatory responses in experimental rat glaucoma |
| Q33613559 | Analysis of protein complexes through model-based biclustering of label-free quantitative AP-MS data |
| Q33771338 | Analysis of the lipid body proteome of the oleaginous alga Lobosphaera incisa |
| Q27935763 | Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors |
| Q30354439 | Analyzing proteomes and protein function using graphical comparative analysis of tandem mass spectrometry results. |
| Q36542831 | Antibacterial effect of microvesicles released from human neutrophilic granulocytes |
| Q36247127 | Assessing the components of the eIF3 complex and their phosphorylation status |
| Q33293626 | C-terminal processing of yeast Spt7 occurs in the absence of functional SAGA complex |
| Q30701618 | CAMS-RS: Clustering Algorithm for Large-Scale Mass Spectrometry Data using Restricted Search Space and Intelligent Random Sampling |
| Q54965847 | Change of ranibizumab-induced human vitreous protein profile in patients with proliferative diabetic retinopathy based on proteomics analysis. |
| Q36003653 | Comparative proteomic network signatures in seminal plasma of infertile men as a function of reactive oxygen species |
| Q38337293 | Comparative transcriptome analysis of yeast strains carrying slt2, rlm1, and pop2 deletions. |
| Q28119145 | Comprehensive Protein Interactome Analysis of a Key RNA Helicase: Detection of Novel Stress Granule Proteins |
| Q36381235 | Discovery of regulatory molecular events and biomarkers using 2D capillary chromatography and mass spectrometry |
| Q36908396 | Distinct GCN5/PCAF-containing complexes function as co-activators and are involved in transcription factor and global histone acetylation. |
| Q28660761 | Distinct septin heteropolymers co-exist during multicellular development in the filamentous fungus Aspergillus nidulans |
| Q96950736 | Dynamic modules of the coactivator SAGA in eukaryotic transcription |
| Q34343547 | Exploring the human plasma proteome for humoral mediators of remote ischemic preconditioning--a word of caution |
| Q38238829 | Functions of SAGA in development and disease |
| Q33493740 | Gcn5 and SAGA regulate shelterin protein turnover and telomere maintenance. |
| Q93056162 | Generating topological protein interaction scores and data visualization with TopS |
| Q36737848 | Genome comparison and proteomic characterization of Thermus thermophilus bacteriophages P23-45 and P74-26: siphoviruses with triplex-forming sequences and the longest known tails |
| Q34702076 | Glaucomatous tissue stress and the regulation of immune response through glial Toll-like receptor signaling |
| Q27939759 | H2B ubiquitin protease Ubp8 and Sgf11 constitute a discrete functional module within the Saccharomyces cerevisiae SAGA complex. |
| Q30479206 | Hair bundles are specialized for ATP delivery via creatine kinase. |
| Q33845331 | Hemoglobin expression and regulation in glaucoma: insights into retinal ganglion cell oxygenation. |
| Q36238608 | Histone H2B ubiquitylation and deubiquitylation in genomic regulation. |
| Q29620006 | Histone acetyltransferase complexes: one size doesn't fit all |
| Q36467223 | Immunoproteomic analysis of potential serum biomarker candidates in human glaucoma |
| Q37553936 | Insights into SAGA function during gene expression |
| Q37797693 | Interplay Between Different Epigenetic Modifications and Mechanisms |
| Q42486443 | Label-free proteomic identification of endogenous, insulin-stimulated interaction partners of insulin receptor substrate-1. |
| Q24652978 | M-type phospholipase A2 receptor as target antigen in idiopathic membranous nephropathy |
| Q37487626 | Mass spectrometry-based approaches toward absolute quantitative proteomics. |
| Q38495388 | Murine colon proteome and characterization of the protein pathways. |
| Q51368901 | NSI and NSMT: usages of MS/MS fragment ion intensity for sensitive differential proteome detection and accurate protein fold change calculation in relative label-free proteome quantification. |
| Q42255068 | Native KCC2 interactome reveals PACSIN1 as a critical regulator of synaptic inhibition |
| Q35524470 | Neurodegenerative and inflammatory pathway components linked to TNF-α/TNFR1 signaling in the glaucomatous human retina |
| Q28577665 | Oxidative stress and the regulation of complement activation in human glaucoma |
| Q90347736 | Platelet factor 4 promotes rapid replication and propagation of Dengue and Japanese encephalitis viruses |
| Q34612422 | Proteomic analysis highlights the molecular complexities of native Kv4 channel macromolecular complexes |
| Q33359977 | Proteomic analysis of renal calculi indicates an important role for inflammatory processes in calcium stone formation |
| Q50312260 | Proteomic and functional characterisation of platelet microparticle size classes |
| Q38024637 | Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present |
| Q33691222 | Quantitative mass spectrometry of diabetic kidney tubules identifies GRAP as a novel regulator of TGF-beta signaling |
| Q35182494 | Quantitative proteomic analysis of distinct mammalian Mediator complexes using normalized spectral abundance factors |
| Q35971247 | RASSF1A and the rs2073498 Cancer Associated SNP |
| Q37233447 | Regulation of H3K4 trimethylation via Cps40 (Spp1) of COMPASS is monoubiquitination independent: implication for a Phe/Tyr switch by the catalytic domain of Set1. |
| Q87973248 | Relative Abundance of Proteins in Blood Plasma Samples from Patients with Chronic Cerebral Ischemia |
| Q27934681 | SAGA-associated Sgf73p facilitates formation of the preinitiation complex assembly at the promoters either in a HAT-dependent or independent manner in vivo |
| Q27661081 | Structural Basis for Assembly and Activation of the Heterotetrameric SAGA Histone H2B Deubiquitinase Module |
| Q27939264 | Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes |
| Q27932671 | The HIR corepressor complex binds to nucleosomes generating a distinct protein/DNA complex resistant to remodeling by SWI/SNF. |
| Q30438554 | The SAGA continues: expanding the cellular role of a transcriptional co-activator complex |
| Q27932453 | The deubiquitylation activity of Ubp8 is dependent upon Sgf11 and its association with the SAGA complex |
| Q38411598 | The essential gene wda encodes a WD40 repeat subunit of Drosophila SAGA required for histone H3 acetylation |
| Q46230758 | The inter-kingdom solo OryR regulator of Xanthomonas oryzae is important for motility |
| Q27940177 | The mRNA export factor Sus1 is involved in Spt/Ada/Gcn5 acetyltransferase-mediated H2B deubiquitinylation through its interaction with Ubp8 and Sgf11. |
| Q40165799 | The myotonic dystrophy type 2 protein ZNF9 is part of an ITAF complex that promotes cap-independent translation |
| Q27930124 | The novel ATP-binding cassette protein ARB1 is a shuttling factor that stimulates 40S and 60S ribosome biogenesis |
| Q35944812 | The sodium channel accessory subunit Navβ1 regulates neuronal excitability through modulation of repolarizing voltage-gated K⁺ channels. |
| Q24338865 | The structural plasticity of SCA7 domains defines their differential nucleosome-binding properties |
| Q27936706 | The yeast eukaryotic translation initiation factor 2B translation initiation complex interacts with the fatty acid synthesis enzyme YBR159W and endoplasmic reticulum membranes |
| Q41891104 | Thermus thermophilus bacteriophage phiYS40 genome and proteomic characterization of virions |
| Q42393750 | Toward the complete characterization of host cell proteins in biotherapeutics via affinity depletions, LC-MS/MS, and multivariate analysis |
| Q33884138 | Ubp10/Dot4p regulates the persistence of ubiquitinated histone H2B: distinct roles in telomeric silencing and general chromatin |
| Q42222766 | Ubp8p, a histone deubiquitinase whose association with SAGA is mediated by Sgf11p, differentially regulates lysine 4 methylation of histone H3 in vivo |
| Q34634683 | Werner helicase-interacting protein 1 binds polyubiquitin via its zinc finger domain |
| Q27935396 | Yeast Sgf73/Ataxin-7 serves to anchor the deubiquitination module into both SAGA and Slik(SALSA) HAT complexes |
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