| scholarly article | Q13442814 |
| P2093 | author name string | Donald L Pappas | |
| Michael Weinreich | |||
| Ryan Frisch | |||
| P2860 | cites work | Negative control of p53 by Sir2alpha promotes cell survival under stress | Q24291828 |
| hSIR2(SIRT1) functions as an NAD-dependent p53 deacetylase | Q24291829 | ||
| The human Sir2 ortholog, SIRT2, is an NAD+-dependent tubulin deacetylase | Q24296836 | ||
| Four genes responsible for a position effect on expression from HML and HMR in Saccharomyces cerevisiae | Q24532215 | ||
| Acetylation of TAF(I)68, a subunit of TIF-IB/SL1, activates RNA polymerase I transcription | Q24545711 | ||
| The origin recognition complex interacts with a bipartite DNA binding site within yeast replicators | Q24563569 | ||
| A synthetic silencer mediates SIR-dependent functions in Saccharomyces cerevisiae | Q24594481 | ||
| Mitotic and meiotic stability of linear plasmids in yeast | Q24599900 | ||
| Differential assembly of Cdc45p and DNA polymerases at early and late origins of DNA replication | Q24685710 | ||
| Structure and function of Cdc6/Cdc18: implications for origin recognition and checkpoint control | Q27627450 | ||
| Crystal structure of the processivity clamp loader gamma (gamma) complex of E. coli DNA polymerase III | Q27634553 | ||
| Yeast origin recognition complex functions in transcription silencing and DNA replication | Q61942289 | ||
| ORC and Cdc6p interact and determine the frequency of initiation of DNA replication in the genome | Q72295197 | ||
| Structure and function of the BAH-containing domain of Orc1p in epigenetic silencing | Q27639534 | ||
| The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation | Q27639653 | ||
| Crystal structure of the hexamerization domain of N-ethylmaleimide-sensitive fusion protein | Q27765268 | ||
| Structure of the ATP-dependent oligomerization domain of N-ethylmaleimide sensitive factor complexed with ATP | Q27765278 | ||
| Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase | Q27860668 | ||
| Association of the RENT complex with nontranscribed and coding regions of rDNA and a regional requirement for the replication fork block protein Fob1 in rDNA silencing | Q27929529 | ||
| Histone acetylation regulates the time of replication origin firing | Q27930649 | ||
| Components and dynamics of DNA replication complexes in S. cerevisiae: redistribution of MCM proteins and Cdc45p during S phase | Q27930849 | ||
| An essential role for the Cdc6 protein in forming the pre-replicative complexes of budding yeast | Q27931174 | ||
| Loading of an Mcm protein onto DNA replication origins is regulated by Cdc6p and CDKs | Q27931263 | ||
| A phylogenetically conserved NAD+-dependent protein deacetylase activity in the Sir2 protein family. | Q27931475 | ||
| Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases | Q27931861 | ||
| Multiple interactions in Sir protein recruitment by Rap1p at silencers and telomeres in yeast. | Q27932142 | ||
| A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA. | Q27932277 | ||
| The silencing protein SIR2 and its homologs are NAD-dependent protein deacetylases | Q27934108 | ||
| Rap1-Sir4 binding independent of other Sir, yKu, or histone interactions initiates the assembly of telomeric heterochromatin in yeast | Q27936518 | ||
| SIR2 and SIR4 interactions differ in core and extended telomeric heterochromatin in yeast | Q27936734 | ||
| Role of interactions between the origin recognition complex and SIR1 in transcriptional silencing | Q27937028 | ||
| Exit from mitosis is triggered by Tem1-dependent release of the protein phosphatase Cdc14 from nucleolar RENT complex | Q27937157 | ||
| The SIR2 gene family, conserved from bacteria to humans, functions in silencing, cell cycle progression, and chromosome stability | Q27937288 | ||
| G1-phase and B-type cyclins exclude the DNA-replication factor Mcm4 from the nucleus | Q27937350 | ||
| Net1, a Sir2-associated nucleolar protein required for rDNA silencing and nucleolar integrity | Q27937617 | ||
| Involvement of the silencer and UAS binding protein RAP1 in regulation of telomere length | Q27938798 | ||
| New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites | Q28131597 | ||
| Position effect at S. cerevisiae telomeres: reversible repression of Pol II transcription | Q28131683 | ||
| AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes | Q28131706 | ||
| DNA replication in eukaryotic cells | Q28131747 | ||
| Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins | Q28139564 | ||
| Cyclin-dependent kinases prevent DNA re-replication through multiple mechanisms | Q28204020 | ||
| The origin recognition complex, SIR1, and the S phase requirement for silencing | Q28239695 | ||
| ATP-dependent recognition of eukaryotic origins of DNA replication by a multiprotein complex | Q28241786 | ||
| The multidomain structure of Orc1p reveals similarity to regulators of DNA replication and transcriptional silencing | Q28291160 | ||
| A yeast chromosomal origin of DNA replication defined by multiple functional elements | Q28679255 | ||
| Modifiers of position effect are shared between telomeric and silent mating-type loci in S. cerevisiae. | Q29465402 | ||
| The establishment, inheritance, and function of silenced chromatin in Saccharomyces cerevisiae | Q29614854 | ||
| Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins: a molecular model for the formation of heterochromatin in yeast | Q29614857 | ||
| Cfi1 prevents premature exit from mitosis by anchoring Cdc14 phosphatase in the nucleolus | Q29615267 | ||
| Transcriptional silencing of Ty1 elements in the RDN1 locus of yeast | Q29618830 | ||
| An unusual form of transcriptional silencing in yeast ribosomal DNA | Q29618831 | ||
| Developmental defects and p53 hyperacetylation in Sir2 homolog (SIRT1)-deficient mice | Q29619786 | ||
| RNA polymerase I propagates unidirectional spreading of rDNA silent chromatin | Q30310369 | ||
| Single-molecule analysis reveals clustering and epigenetic regulation of replication origins at the yeast rDNA locus | Q30479469 | ||
| Xenopus Cdc6 performs separate functions in initiating DNA replication | Q33608362 | ||
| Ordered nucleation and spreading of silenced chromatin in Saccharomyces cerevisiae. | Q33893339 | ||
| Sir2 links chromatin silencing, metabolism, and aging | Q33901751 | ||
| Completion of replication map of Saccharomyces cerevisiae chromosome III. | Q33948459 | ||
| Enzymatic activities of Sir2 and chromatin silencing | Q34180696 | ||
| Histone acetylation and deacetylation in yeast | Q34187792 | ||
| Cell cycle control of DNA replication. | Q34408864 | ||
| The molecular biology of the SIR proteins | Q34448539 | ||
| Histone deacetylases and cancer: causes and therapies | Q34570082 | ||
| A region of the Sir1 protein dedicated to recognition of a silencer and required for interaction with the Orc1 protein in saccharomyces cerevisiae | Q34606092 | ||
| The role of nucleotide binding and hydrolysis in the function of the fission yeast cdc18(+) gene product | Q34606637 | ||
| Paradigms and pitfalls of yeast longevity research | Q34667086 | ||
| The Cdc6p nucleotide-binding motif is required for loading mcm proteins onto chromatin | Q34812174 | ||
| Motors and switches: AAA+ machines within the replisome. | Q34988324 | ||
| Telomeric chromatin modulates replication timing near chromosome ends | Q35187055 | ||
| The carboxy termini of Sir4 and Rap1 affect Sir3 localization: evidence for a multicomponent complex required for yeast telomeric silencing | Q36235711 | ||
| Locus specificity determinants in the multifunctional yeast silencing protein Sir2 | Q36246286 | ||
| Addition of extra origins of replication to a minichromosome suppresses its mitotic loss in cdc6 and cdc14 mutants of Saccharomyces cerevisiae | Q36937916 | ||
| Steps in assembly of silent chromatin in yeast: Sir3-independent binding of a Sir2/Sir4 complex to silencers and role for Sir2-dependent deacetylation | Q39674793 | ||
| Ku complex controls the replication time of DNA in telomere regions. | Q39864326 | ||
| The structure and function of yeast ARS elements | Q40797768 | ||
| Once and only once upon a time: specifying and regulating origins of DNA replication in eukaryotic cells | Q41212656 | ||
| Nucleosome positioning can affect the function of a cis-acting DNA element in vivo | Q41241827 | ||
| Hyperactivation of the silencing proteins, Sir2p and Sir3p, causes chromosome loss | Q41831344 | ||
| Acetylation of the yeast histone H4 N terminus regulates its binding to heterochromatin protein SIR3. | Q43803659 | ||
| A yeast origin of replication is activated late in S phase | Q44228986 | ||
| The cyclin-dependent kinase Cdc28p regulates distinct modes of Cdc6p proteolysis during the budding yeast cell cycle. | Q45345061 | ||
| Association of the origin recognition complex with heterochromatin and HP1 in higher eukaryotes | Q46408897 | ||
| Origin recognition complex (ORC) in transcriptional silencing and DNA replication in S. cerevisiae | Q46889661 | ||
| Nucleotide-dependent prereplicative complex assembly by Cdc6p, a homolog of eukaryotic and prokaryotic clamp-loaders | Q47693928 | ||
| Replication dynamics of the yeast genome. | Q52053905 | ||
| Nucleosomes positioned by ORC facilitate the initiation of DNA replication. | Q52542122 | ||
| RAP1 and telomere structure regulate telomere position effects in Saccharomyces cerevisiae. | Q54655346 | ||
| P433 | issue | 7 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | NAD-dependent histone deacetylase SIR2 YDL042C | Q27551037 |
| P304 | page(s) | 769-81 | |
| P577 | publication date | 2004-04-01 | |
| P1433 | published in | Genes & Development | Q1524533 |
| P1476 | title | The NAD(+)-dependent Sir2p histone deacetylase is a negative regulator of chromosomal DNA replication | |
| P478 | volume | 18 |
| Q33327694 | An increase in mitochondrial DNA promotes nuclear DNA replication in yeast. |
| Q42407097 | Analysis of chromosome III replicators reveals an unusual structure for the ARS318 silencer origin and a conserved WTW sequence within the origin recognition complex binding site |
| Q33299615 | Association with the origin recognition complex suggests a novel role for histone acetyltransferase Hat1p/Hat2p |
| Q40033702 | Beyond heterochromatin: SIR2 inhibits the initiation of DNA replication |
| Q39078795 | CTD kinase I is required for the integrity of the rDNA tandem array |
| Q42126947 | Cdc18/CDC6 activates the Rad3-dependent checkpoint in the fission yeast |
| Q35989395 | Cdc6 ATPase activity disengages Cdc6 from the pre-replicative complex to promote DNA replication. |
| Q27940181 | Control of replication initiation and heterochromatin formation in Saccharomyces cerevisiae by a regulator of meiotic gene expression |
| Q27931914 | Control of replication initiation by the Sum1/Rfm1/Hst1 histone deacetylase |
| Q27937313 | Conversion of a replication origin to a silencer through a pathway shared by a Forkhead transcription factor and an S phase cyclin |
| Q36553045 | DNA replication: the unbearable lightness of origins |
| Q34780596 | Defining the replication program through the chromatin landscape |
| Q42175135 | Differential chromatin structure encompassing replication origins in transformed and normal cells |
| Q42700642 | Dynamic changes in histone acetylation regulate origins of DNA replication |
| Q36659540 | Eukaryotic DNA replication in a chromatin context |
| Q34150833 | Expanded role for the nitrogen assimilation control protein in the response of Klebsiella pneumoniae to nitrogen stress |
| Q55366214 | Fission Yeast Sirtuin Hst4 Functions in Preserving Genomic Integrity by Regulating Replisome Component Mcl1. |
| Q27938701 | Forkhead transcription factors establish origin timing and long-range clustering in S. cerevisiae |
| Q24299558 | Functional cooperation between FACT and MCM helicase facilitates initiation of chromatin DNA replication |
| Q33529002 | GCN5 is a positive regulator of origins of DNA replication in Saccharomyces cerevisiae |
| Q28272275 | HBO1 histone acetylase activity is essential for DNA replication licensing and inhibited by Geminin |
| Q35174753 | High-resolution analysis of four efficient yeast replication origins reveals new insights into the ORC and putative MCM binding elements |
| Q30436256 | Histone acetyltransferase Hbo1: catalytic activity, cellular abundance, and links to primary cancers |
| Q36769537 | Human SIRT1 regulates DNA binding and stability of the Mcm10 DNA replication factor via deacetylation. |
| Q38712116 | Identification and characterization of ARS-like sequences as putative origin(s) of replication in human malaria parasite Plasmodium falciparum |
| Q35629825 | Linking DNA replication to heterochromatin silencing and epigenetic inheritance |
| Q27931077 | Mcm10 is required for the maintenance of transcriptional silencing in Saccharomyces cerevisiae |
| Q27932408 | Mcm10 mediates the interaction between DNA replication and silencing machineries |
| Q39804470 | Nucleosome assembly proteins bind to Epstein-Barr virus nuclear antigen 1 and affect its functions in DNA replication and transcriptional activation |
| Q42431216 | Nucleotide supply, not local histone acetylation, sets replication origin usage in transcribed regions |
| Q28546428 | Overexpression of cytoplasmic TcSIR2RP1 and mitochondrial TcSIR2RP3 impacts on Trypanosoma cruzi growth and cell invasion |
| Q36868518 | Positive roles of SAS2 in DNA replication and transcriptional silencing in yeast |
| Q37672435 | Programming DNA replication origins and chromosome organization |
| Q24537658 | Regulation of replication licensing by acetyltransferase Hbo1. |
| Q36875519 | Replication in context: dynamic regulation of DNA replication patterns in metazoans |
| Q37147957 | Reversible lysine acetylation is involved in DNA replication initiation by regulating activities of initiator DnaA in Escherichia coli |
| Q39117291 | SIR2 modifies histone H4-K16 acetylation and affects superhelicity in the ARS region of plasmid chromatin in Saccharomyces cerevisiae. |
| Q36483388 | Slx5 promotes transcriptional silencing and is required for robust growth in the absence of Sir2. |
| Q41949261 | Sumoylation of Sir2 differentially regulates transcriptional silencing in yeast. |
| Q35821071 | The Chromatin and Transcriptional Landscape of Native Saccharomyces cerevisiae Telomeres and Subtelomeric Domains |
| Q27930087 | The Ime2 protein kinase enhances the disassociation of the Sum1 repressor from middle meiotic promoters |
| Q33953651 | The conserved bromo-adjacent homology domain of yeast Orc1 functions in the selection of DNA replication origins within chromatin |
| Q38472362 | The epigenetic regulation of autonomous replicons |
| Q36242767 | The histone acetyltransferases CBP and Chameau integrate developmental and DNA replication programs in Drosophila ovarian follicle cells |
| Q24794185 | The histone deacetylase inhibitor trichostatin A alters the pattern of DNA replication origin activity in human cells |
| Q28472092 | The origin recognition complex interacts with a subset of metabolic genes tightly linked to origins of replication |
| Q43241562 | Tolerance of Sir1p/origin recognition complex-dependent silencing for enhanced origin firing at HMRa |
| Q55114402 | Yeast heterochromatin regulators Sir2 and Sir3 act directly at euchromatic DNA replication origins. |
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