OpenMS: a flexible open-source software platform for mass spectrometry data analysis

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OpenMS: a flexible open-source software platform for mass spectrometry data analysis is …
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P6179Dimensions Publication ID1017141397
P356DOI10.1038/NMETH.3959
P698PubMed publication ID27575624

P50authorRuedi AebersoldQ7377799
Oliver KohlbacherQ29998906
David WojnarQ29998961
Knut ReinertQ29998984
Stephan AicheQ47155908
Jyoti ChoudharyQ56421088
Lars MalmströmQ30347545
George RosenbergerQ39404611
Hannes L. RöstQ39404671
P2093author name stringWitold E Wolski
Xiao Liang
Sven Nahnsen
Uwe Schmitt
Oliver Schilling
Timo Sachsenberg
Chris Bielow
Erhan Kenar
Mathias Walzer
Lars Nilse
Hans-Christian Ehrlich
Johannes Veit
Hendrik Weisser
Marc Rurik
Julianus Pfeuffer
Fabian Aicheler
Petra Gutenbrunner
Sandro Andreotti
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Probabilistic Consensus Scoring Improves Tandem Mass Spectrometry Peptide IdentificationQ57011814
Code shareQ59069689
Devil in the detailsQ60098590
Publisher Correction: OpenSWATH enables automated, targeted analysis of data-independent acquisition MS dataQ89866869
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Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins.Q38304574
Formalin-Fixed, Paraffin-Embedded Tissues (FFPE) as a Robust Source for the Profiling of Native and Protease-Generated Protein Amino Termini.Q38380965
qcML: an exchange format for quality control metrics from mass spectrometry experimentsQ38417783
pyOpenMS: a Python-based interface to the OpenMS mass-spectrometry algorithm libraryQ38451051
Contribution of cathepsin L to secretome composition and cleavage pattern of mouse embryonic fibroblastsQ39463052
Toward improved peptide feature detection in quantitative proteomics using stable isotope labelingQ40990458
MSstats: an R package for statistical analysis of quantitative mass spectrometry-based proteomic experimentsQ42658640
Semi-supervised learning for peptide identification from shotgun proteomics datasets.Q45965072
P433issue9
P407language of work or nameEnglishQ1860
P921main subjectsoftwareQ7397
open-source softwareQ1130645
data analysisQ1988917
P304page(s)741-8
P577publication date2016-08-30
P1433published inNature MethodsQ680640
P1476titleOpenMS: a flexible open-source software platform for mass spectrometry data analysis
P2283usesOpenMSQ7095827
P478volume13

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