Correspondence of D. melanogaster and C. elegans developmental stages revealed by alternative splicing characteristics of conserved exons

scientific article

Correspondence of D. melanogaster and C. elegans developmental stages revealed by alternative splicing characteristics of conserved exons is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1084250067
P356DOI10.1186/S12864-017-3600-2
P2888exact matchhttps://scigraph.springernature.com/pub.10.1186/s12864-017-3600-2
P8608Fatcat IDrelease_txssv3z6drdn5eohuzx2u2dbiq
P932PMC publication ID5353869
P698PubMed publication ID28302059

P50authorJingyi Jessica LiQ57003057
P2093author name stringRuiqi Gao
P2860cites workfog-2 and the evolution of self-fertile hermaphroditism in CaenorhabditisQ21146385
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
A novel class of evolutionarily conserved genes defined by piwi are essential for stem cell self-renewalQ24595550
Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiationQ24627354
The MicroRNA miR-124 promotes neuronal differentiation by triggering brain-specific alternative pre-mRNA splicingQ24631683
Protein modularity of alternatively spliced exons is associated with tissue-specific regulation of alternative splicingQ24812842
TreeFam: a curated database of phylogenetic trees of animal gene familiesQ25256560
Alternative splicing of conserved exons is frequently species-specific in human and mouseQ81299363
An extensive class of small RNAs in Caenorhabditis elegansQ27860626
Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timingQ27860903
Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNAQ27861092
Ensembl 2012Q28253062
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE projectQ28301622
InterProScan--an integration platform for the signature-recognition methods in InterProQ29547336
Comparative genomics of the eukaryotesQ29547504
Ensembl 2009Q29614532
Understanding alternative splicing: towards a cellular codeQ29615085
Identification of functional elements and regulatory circuits by Drosophila modENCODEQ29617551
Transcriptome and genome conservation of alternative splicing events in humans and mice.Q30753313
The genetics of cell migration in Drosophila melanogaster and Caenorhabditis elegans development.Q33664605
Unlocking the secrets of the genomeQ33745487
Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq dataQ33839404
Identification and analysis of alternative splicing events conserved in human and mouseQ33841124
Sequence conservation, relative isoform frequencies, and nonsense-mediated decay in evolutionarily conserved alternative splicingQ33929068
Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiationQ33935135
Evidence of functional selection pressure for alternative splicing events that accelerate evolution of protein subsequencesQ34015788
Comparative analysis of the transcriptome across distant speciesQ34139425
An alternative splicing switch regulates embryonic stem cell pluripotency and reprogrammingQ34216981
A computational and experimental approach toward a priori identification of alternatively spliced exonsQ34366154
The transcriptional diversity of 25 Drosophila cell linesQ34548309
Genomewide comparative analysis of alternative splicing in plantsQ34598692
Alternative splicing and evolution: diversification, exon definition and functionQ34618555
How prevalent is functional alternative splicing in the human genome?Q35640491
Evolutionary convergence of alternative splicing in ion channelsQ35752648
Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomesQ35752833
Dare to be different: asymmetric cell division in Drosophila, C. elegans and vertebratesQ35868625
Developmental apoptosis in C. elegans: a complex CEDnarioQ36403386
Alternative splicing: new insights from global analysesQ36535438
Genetics of germ cell developmentQ38050348
TROM: A Testing-Based Method for Finding Transcriptomic Similarity of Biological SamplesQ38637971
Evidence for a subpopulation of conserved alternative splicing events under selection pressure for protein reading frame preservationQ40773029
Alternative splicing in the human, mouse and rat genomes is associated with an increased frequency of exon creation and/or lossQ46234594
Gene expression during the life cycle of Drosophila melanogaster.Q52031678
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectCaenorhabditis elegansQ91703
RNA sequencingQ2542347
alternative mRNA splicing, via spliceosomeQ21114084
P304page(s)234
P577publication date2017-03-16
P1433published inBMC GenomicsQ15765854
P1476titleCorrespondence of D. melanogaster and C. elegans developmental stages revealed by alternative splicing characteristics of conserved exons
P478volume18

Reverse relations

Q92922602Modeling and analysis of RNA-seq data: a review from a statistical perspectivecites workP2860

Search more.