Elucidation of the Molecular Mechanism Driving Duplication of the HIV-1 PTAP Late Domain

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Elucidation of the Molecular Mechanism Driving Duplication of the HIV-1 PTAP Late Domain is …
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scholarly articleQ13442814

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P356DOI10.1128/JVI.01640-15
P932PMC publication ID4702686
P698PubMed publication ID26512081

P50authorEric O FreedQ67208349
Christos J PetropoulosQ84542015
Rodrigo BrindeiroQ91113863
P2093author name stringWei Huang
Alicia Newton
Abdul A Waheed
Angelica N Martins
Sherimay D Ablan
P2860cites workTsg101 and the vacuolar protein sorting pathway are essential for HIV-1 buddingQ24291784
Overexpression of the N-terminal domain of TSG101 inhibits HIV-1 budding by blocking late domain functionQ24530772
Circulating metabolites of the human immunodeficiency virus protease inhibitor nelfinavir in humans: structural identification, levels in plasma, and antiviral activitiesQ24550608
Effect of mutations affecting the p6 gag protein on human immunodeficiency virus particle releaseQ24563651
Activity of purified biosynthetic proteinase of human immunodeficiency virus on natural substrates and synthetic peptidesQ24627225
Tsg101, a homologue of ubiquitin-conjugating (E2) enzymes, binds the L domain in HIV type 1 Pr55(Gag)Q24633537
Virus budding and the ESCRT pathwayQ26828590
Current perspectives on HIV-1 antiretroviral drug resistanceQ26852626
The choreography of HIV-1 proteolytic processing and virion assemblyQ27009643
HIV-1 and Ebola virus encode small peptide motifs that recruit Tsg101 to sites of particle assembly to facilitate egressQ28207991
Second locus involved in human immunodeficiency virus type 1 resistance to protease inhibitorsQ28378860
Drug resistance during indinavir therapy is caused by mutations in the protease gene and in its Gag substrate cleavage sitesQ28379086
A novel substrate-based HIV-1 protease inhibitor drug resistance mechanismQ28469113
Gag mutations strongly contribute to HIV-1 resistance to protease inhibitors in highly drug-experienced patients besides compensating for fitness lossQ28474984
Role of the SP2 domain and its proteolytic cleavage in HIV-1 structural maturation and infectivityQ28710568
Emergence of resistant human immunodeficiency virus type 1 in patients receiving fusion inhibitor (T-20) monotherapy.Q29619254
Replacement of the P1 amino acid of human immunodeficiency virus type 1 Gag processing sites can inhibit or enhance the rate of cleavage by the viral proteaseQ30850215
The capsid-spacer peptide 1 Gag processing intermediate is a dominant-negative inhibitor of HIV-1 maturationQ33727091
Mutations of the human immunodeficiency virus type 1 p6Gag domain result in reduced retention of Pol proteins during virus assembly.Q33783498
Distinct nucleic acid interaction properties of HIV-1 nucleocapsid protein precursor NCp15 explain reduced viral infectivityQ33791156
Maintenance of the Gag/Gag-Pol ratio is important for human immunodeficiency virus type 1 RNA dimerization and viral infectivityQ33837707
Resistance to nucleoside analog reverse transcriptase inhibitors mediated by human immunodeficiency virus type 1 p6 proteinQ33846417
A novel phenotypic drug susceptibility assay for human immunodeficiency virus type 1Q33979107
Comparison of the HIV-1 and HIV-2 proteinases using oligopeptide substrates representing cleavage sites in Gag and Gag-Pol polyproteinsQ34098983
The late domain of human immunodeficiency virus type 1 p6 promotes virus release in a cell type-dependent mannerQ34104639
p6Gag is required for particle production from full-length human immunodeficiency virus type 1 molecular clones expressing proteaseQ34288376
Selection of fully processed HIV-1 nucleocapsid protein is required for optimal nucleic acid chaperone activity in reverse transcriptionQ34614167
Functional correlation between a novel amino acid insertion at codon 19 in the protease of human immunodeficiency virus type 1 and polymorphism in the p1/p6 Gag cleavage site in drug resistance and replication fitnessQ34651403
Rates of emergence of HIV drug resistance in resource-limited settings: a systematic reviewQ34969496
Testing genotypic and phenotypic resistance in human immunodeficiency virus type 1 isolates of clade B and other clades from children failing antiretroviral therapyQ34989641
Multi-step inhibition explains HIV-1 protease inhibitor pharmacodynamics and resistance.Q35237575
Gag non-cleavage site mutations contribute to full recovery of viral fitness in protease inhibitor-resistant human immunodeficiency virus type 1.Q35548279
Mutational analysis of the C-terminal gag cleavage sites in human immunodeficiency virus type 1Q36098898
Evidence for a functional interaction between the V1/V2 and C4 domains of human immunodeficiency virus type 1 envelope glycoprotein gp120.Q36632356
Expression and processing of human immunodeficiency virus type 1 gag and pol genes by cells infected with a recombinant vaccinia virusQ36782067
The gag gene products of human immunodeficiency virus type 1: alignment within the gag open reading frame, identification of posttranslational modifications, and evidence for alternative gag precursorsQ36881276
Regulation of human immunodeficiency virus type 1 Env-mediated membrane fusion by viral protease activityQ36944098
Emergence of HIV drug resistance during first- and second-line antiretroviral therapy in resource-limited settingsQ37003942
New approaches to HIV protease inhibitor drug design II: testing the substrate envelope hypothesis to avoid drug resistance and discover robust inhibitorsQ37262113
Positive selection pressure introduces secondary mutations at Gag cleavage sites in human immunodeficiency virus type 1 harboring major protease resistance mutationsQ37333801
HIV-1 Gag processing intermediates trans-dominantly interfere with HIV-1 infectivity.Q37447762
The cell biology of HIV-1 virion genesisQ37520101
Amino acid insertions near Gag cleavage sites restore the otherwise compromised replication of human immunodeficiency virus type 1 variants resistant to protease inhibitorsQ37583389
Structural basis for coevolution of a human immunodeficiency virus type 1 nucleocapsid-p1 cleavage site with a V82A drug-resistant mutation in viral proteaseQ37596952
HIV-1 assembly, budding, and maturationQ38023864
Retroviral proteases and their roles in virion maturationQ38393674
HIV-1 assembly, release and maturation.Q38539565
Role of Gag in HIV Resistance to Protease InhibitorsQ38615581
Replicative fitness of protease inhibitor-resistant mutants of human immunodeficiency virus type 1.Q39550343
Sequential steps in human immunodeficiency virus particle maturation revealed by alterations of individual Gag polyprotein cleavage sites.Q39579012
Loss of viral fitness associated with multiple Gag and Gag-Pol processing defects in human immunodeficiency virus type 1 variants selected for resistance to protease inhibitors in vivo.Q39579408
Resistance-associated loss of viral fitness in human immunodeficiency virus type 1: phenotypic analysis of protease and gag coevolution in protease inhibitor-treated patientsQ39580564
Human immunodeficiency virus type 1 protease cleavage site mutations associated with protease inhibitor cross-resistance selected by indinavir, ritonavir, and/or saquinavirQ39601382
Changes in human immunodeficiency virus type 1 Gag at positions L449 and P453 are linked to I50V protease mutants in vivo and cause reduction of sensitivity to amprenavir and improved viral fitness in vitroQ39684211
Changes in the human immunodeficiency virus p7-p1-p6 gag gene in drug-naive and pretreated patientsQ39735514
Methods for the study of HIV-1 assembly.Q39914278
The p2 domain of human immunodeficiency virus type 1 Gag regulates sequential proteolytic processing and is required to produce fully infectious virions.Q40042979
Coupling of human immunodeficiency virus type 1 fusion to virion maturation: a novel role of the gp41 cytoplasmic tailQ40579232
Amino acid substitutions in Gag protein at non-cleavage sites are indispensable for the development of a high multitude of HIV-1 resistance against protease inhibitorsQ40763780
Novel cytotoxic T-lymphocyte escape mutation by a three-amino-acid insertion in the human immunodeficiency virus type 1 p6Pol and p6Gag late domain associated with drug resistanceQ41913817
Synthetic peptides as substrates and inhibitors of human immune deficiency virus-1 protease.Q42206980
A strongly transdominant mutation in the human immunodeficiency virus type 1 gag gene defines an Achilles heel in the virus life cycleQ42546287
Plasma concentrations of generic lopinavir/ritonavir in HIV type-1-infected individualsQ43240921
Nelfinavir plasma levels under twice-daily and three-times-daily regimens: high interpatient and low intrapatient variability.Q43690629
Identification of protein intermediates in the processing of the p55 HIV-1 gag precursor in cells infected with recombinant vaccinia virusQ43691016
Effect of sequence polymorphism and drug resistance on two HIV-1 Gag processing sites.Q44103766
Selection of human immunodeficiency virus type 1 variants with an insertion mutation in the p6(gag) and p6(pol) genes under highly active antiretroviral therapyQ45728754
Use of a green fluorescent protein as a marker for human immunodeficiency virus type 1 infectionQ45760752
Versatile PCR-mediated insertion or deletion mutagenesisQ47901424
Accumulation of P(T/S)AP Late Domain Duplications in HIV Type 1 Subtypes B, C, and F Derived from Individuals Failing ARV Therapy and ARV Drug-Naive PatientsQ48061694
The Impact of HIV Drug Resistance on the Selection of First- and Second-Line ART in Resource-Limited Settings.Q51873753
Association of Gag cleavage sites to protease mutations and to virological response in HIV-1 treated patients.Q51936440
Compensatory mutations at the HIV cleavage sites p7/p1 and p1/p6-gag in therapy-naive and therapy-experienced patients.Q53570987
Cleavage of HIV-1 gag polyprotein synthesized in vitro: sequential cleavage by the viral proteaseQ69564852
HIV type 1 protease cleavage site mutations and viral fitness: implications for drug susceptibility phenotyping assaysQ74213231
Polymorphism of HIV type 1 gag p7/p1 and p1/p6 cleavage sites: clinical significance and implications for resistance to protease inhibitorsQ74220146
Variability in the P6gag domains of HIV-1 involved in viral buddingQ82519683
P433issue2
P407language of work or nameEnglishQ1860
P921main subjectHIVQ15787
P304page(s)768-779
P577publication date2015-10-28
P1433published inJournal of VirologyQ1251128
P1476titleElucidation of the Molecular Mechanism Driving Duplication of the HIV-1 PTAP Late Domain
P478volume90