Transcriptional regulation of gene expression in C. elegans

scientific article published on 04 June 2013

Transcriptional regulation of gene expression in C. elegans is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1895/WORMBOOK.1.45.2
P932PMC publication ID3893038
P698PubMed publication ID23801596
P5875ResearchGate publication ID242017545

P50authorValerie ReinkeQ57338308
P2093author name stringMichael Krause
Peter Okkema
P2860cites workProtein family expansions and biological complexityQ21145685
Comparative analysis of function and interaction of transcription factors in nematodes: extensive conservation of orthology coupled to rapid sequence evolutionQ21263171
Cloning and properties of the Caenorhabditis elegans TATA-box-binding proteinQ24319316
Identification of the differential distribution patterns of mRNAs and consensus binding sequences for mouse DAF-16 homologuesQ24532085
Formation, regulation and evolution of Caenorhabditis elegans 3'UTRsQ24598773
Regulation of chromatin by histone modificationsQ24635070
A multiparameter network reveals extensive divergence between C. elegans bHLH transcription factorsQ24642967
Transcription of the C. elegans let-7 microRNA is temporally regulated by one of its targets, hbl-1Q24645262
Identification of genes expressed in C. elegans touch receptor neuronsQ59097360
Formation of a monomeric DNA binding domain by Skn-1 bZIP and homeodomain elementsQ72752185
A conserved transcription motif suggesting functional parallels between Caenorhabditis elegans SKN-1 and Cap'n'Collar-related basic leucine zipper proteinsQ73675896
Programmed cell deathQ80152495
Regulation of rnt-1 expression mediated by the opposing effects of BRO-1 and DBL-1 in the nematode Caenorhabditis elegansQ80407878
Gfi-1 encodes a nuclear zinc finger protein that binds DNA and functions as a transcriptional repressorQ24648833
DBD--taxonomically broad transcription factor predictions: new content and functionalityQ24650744
xol-1, the master sex-switch gene in C. elegans, is a transcriptional target of the terminal sex-determining factor TRA-1Q24655177
Gene regulatory logic of dopamine neuron differentiationQ24656218
The conserved NAD(H)-dependent corepressor CTBP-1 regulates Caenorhabditis elegans life spanQ24658101
A gene expression fingerprint of C. elegans embryonic motor neuronsQ24793234
nfi-I affects behavior and life-span in C. elegans but is not essential for DNA replication or survivalQ24813734
The EH1 motif in metazoan transcription factorsQ24816494
Seeing elegance in gene regulatory networks of the wormQ27001247
The Caenorhabditis elegans HNF4alpha Homolog, NHR-31, mediates excretory tube growth and function through coordinate regulation of the vacuolar ATPaseQ27312136
An integrated strategy to study muscle development and myofilament structure in Caenorhabditis elegansQ27312196
Coordinated regulation of intestinal functions in C. elegans by LIN-35/Rb and SLR-2Q27313826
The Caenorhabditis elegans T-box factor MLS-1 requires Groucho co-repressor interaction for uterine muscle specificationQ27339317
A Genome-Wide RNAi Screen for Factors Involved in Neuronal Specification in Caenorhabditis elegansQ27340115
Chromosome-biased binding and gene regulation by the Caenorhabditis elegans DRM complexQ27340320
A role for Set1/MLL-related components in epigenetic regulation of the Caenorhabditis elegans germ lineQ27342739
Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental responseQ27348311
A widespread distribution of genomic CeMyoD binding sites revealed and cross validated by ChIP-Chip and ChIP-Seq techniquesQ27438090
Increased dosage of a sir-2 gene extends lifespan in Caenorhabditis elegansQ28131824
Zinc fingers--folds for many occasionsQ28187358
Retinoblastoma protein recruits histone deacetylase to repress transcriptionQ28262144
Sticky fingers: zinc-fingers as protein-recognition motifsQ28282409
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE projectQ28301622
The T-box factor MLS-1 acts as a molecular switch during specification of nonstriated muscle in C. elegansQ28345297
Different Mi-2 complexes for various developmental functions in Caenorhabditis elegansQ28475938
H3K9me2/3 binding of the MBT domain protein LIN-61 is essential for Caenorhabditis elegans vulva developmentQ28477443
Phosphatidylinositol 3-kinase signaling inhibits DAF-16 DNA binding and function via 14-3-3-dependent and 14-3-3-independent pathwaysQ28588530
Temporal and spatial expression patterns of the small heat shock (hsp16) genes in transgenic Caenorhabditis elegansQ28776675
Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificitiesQ29301030
Phosphorylation and functions of the RNA polymerase II CTDQ29614764
Progression through the RNA polymerase II CTD cycleQ29614782
Identification of functional elements and regulatory circuits by Drosophila modENCODEQ29617551
The evolution of gene regulation by transcription factors and microRNAsQ29617552
Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomesQ29618470
Transcription regulation and animal diversityQ29618752
Regulation of the Caenorhabditis elegans longevity protein DAF-16 by insulin/IGF-1 and germline signalingQ29619762
Wnt signaling and CEH-22/tinman/Nkx2.5 specify a stem cell niche in C. elegansQ35132203
A CBP/p300 homolog specifies multiple differentiation pathways in Caenorhabditis elegans.Q35195830
pha-4, an HNF-3 homolog, specifies pharyngeal organ identity in Caenorhabditis elegansQ35204451
The forkhead transcription factor UNC-130 is required for the graded spatial expression of the UNC-129 TGF-beta guidance factor in C. elegansQ35204643
Analysis of a Caenorhabditis elegans Twist homolog identifies conserved and divergent aspects of mesodermal patterningQ35207840
UNC-4/UNC-37-dependent repression of motor neuron-specific genes controls synaptic choice in Caenorhabditis elegansQ35208880
Hox and a newly identified E2F co-repress cell death in Caenorhabditis elegansQ35221460
Functional conservation of nematode and vertebrate myogenic regulatory factorsQ35239885
The C. elegans vitellogenin genes: short sequence repeats in the promoter regions and homology to the vertebrate genesQ35557134
Enhanced yeast one-hybrid assays for high-throughput gene-centered regulatory network mapping.Q35607409
KIN-29 SIK regulates chemoreceptor gene expression via an MEF2 transcription factor and a class II HDAC.Q35612504
Action of the Caenorhabditis elegans GATA factor END-1 in Xenopus suggests that similar mechanisms initiate endoderm development in ecdysozoa and vertebratesQ35669861
LIN-39/Hox triggers cell division and represses EFF-1/fusogen-dependent vulval cell fusionQ35805454
LIN-61, one of two Caenorhabditis elegans malignant-brain-tumor-repeat-containing proteins, acts with the DRM and NuRD-like protein complexes in vulval development but not in certain other biological processesQ35844907
Gene expression profiling of cells, tissues, and developmental stages of the nematode C. elegansQ35875150
The SynMuv genes of Caenorhabditis elegans in vulval development and beyondQ35955994
Caenorhabditis elegans orthologs of the aryl hydrocarbon receptor and its heterodimerization partner the aryl hydrocarbon receptor nuclear translocatorQ35973611
Post-translational modifications influence transcription factor activity: a view from the ETS superfamilyQ36043735
A CUL-2 ubiquitin ligase containing three FEM proteins degrades TRA-1 to regulate C. elegans sex determinationQ36119946
Control of sex-specific apoptosis in C. elegans by the BarH homeodomain protein CEH-30 and the transcriptional repressor UNC-37/GrouchoQ36151090
We gather together: insulators and genome organizationQ36407771
Analysis of cell fate from single-cell gene expression profiles in C. elegansQ36452051
Polycomb response elements and targeting of Polycomb group proteins in Drosophila.Q36567949
Cell-specific microarray profiling experiments reveal a comprehensive picture of gene expression in the C. elegans nervous systemQ36570593
Analysis of the VPE sequences in the Caenorhabditis elegans vit-2 promoter with extrachromosomal tandem array-containing transgenic strainsQ36643765
The Caenorhabditis elegans NK-2 class homeoprotein CEH-22 is involved in combinatorial activation of gene expression in pharyngeal muscle.Q36723251
Mesodermal expression of the C. elegans HMX homolog mls-2 requires the PBC homolog CEH-20Q36739362
Molecular cloning and sequencing of ama-1, the gene encoding the largest subunit of Caenorhabditis elegans RNA polymerase II.Q36761409
Molecular implementation and physiological roles for histone H3 lysine 4 (H3K4) methylationQ36824900
Automated analysis of embryonic gene expression with cellular resolution in C. elegans.Q36909568
Regulation of vitellogenin gene expression in transgenic Caenorhabditis elegans: short sequences required for activation of the vit-2 promoterQ36965113
Transcriptional regulationQ37020528
Transcription mechanismsQ37020559
The C. elegans intestineQ37020788
An extensive requirement for transcription factor IID-specific TAF-1 in Caenorhabditis elegans embryonic transcriptionQ47068840
CHR3: a Caenorhabditis elegans orphan nuclear hormone receptor required for proper epidermal development and moltingQ47068843
DNA binding and in vivo function of C.elegans PEB-1 require a conserved FLYWCH motifQ47068846
The CSL transcription factor LAG-1 directly represses hlh-6 expression in C. elegansQ47068931
Muscle and nerve-specific regulation of a novel NK-2 class homeodomain factor in Caenorhabditis elegansQ47068947
The heterochronic gene lin-29 encodes a zinc finger protein that controls a terminal differentiation event in Caenorhabditis elegans.Q47068948
EGL-38 Pax regulates the ovo-related gene lin-48 during Caenorhabditis elegans organ developmentQ47068965
Mab-3 is a direct tra-1 target gene regulating diverse aspects of C. elegans male sexual development and behaviorQ47068980
Alteration of the DNA binding domain disrupts distinct functions of the C. elegans Pax protein EGL-38.Q47069010
The UNC-3 Olf/EBF protein represses alternate neuronal programs to specify chemosensory neuron identityQ47069018
Control of type-D GABAergic neuron differentiation by C. elegans UNC-30 homeodomain proteinQ47069020
Two C. elegans histone methyltransferases repress lin-3 EGF transcription to inhibit vulval developmentQ47069021
Transcription factor NFY globally represses the expression of the C. elegans Hox gene Abdominal-B homolog egl-5.Q47069062
The C. elegans Mi-2 chromatin-remodelling proteins function in vulval cell fate determination.Q47069081
The T-box factor TBX-2 and the SUMO conjugating enzyme UBC-9 are required for ABa-derived pharyngeal muscle in C. elegansQ47069121
The MADS-Box factor CeMEF2 is not essential for Caenorhabditis elegans myogenesis and developmentQ47069122
RLE-1, an E3 ubiquitin ligase, regulates C. elegans aging by catalyzing DAF-16 polyubiquitinationQ47069128
TBP-like factor is required for embryonic RNA polymerase II transcription in C. elegansQ47069152
Regulation of touch receptor differentiation by the Caenorhabditis elegans mec-3 and unc-86 genes.Q47069187
Environmentally induced foregut remodeling by PHA-4/FoxA and DAF-12/NHR.Q47069222
C. elegans STAT: evolution of a regulatory switchQ47069274
Overlapping roles of two Hox genes and the exd ortholog ceh-20 in diversification of the C. elegans postembryonic mesoderm.Q47069324
MEP-1 and a homolog of the NURD complex component Mi-2 act together to maintain germline-soma distinctions in C. elegansQ47069337
Structure, expression, and evolution of a heat shock gene locus in Caenorhabditis elegans that is flanked by repetitive elementsQ47069348
An early pharyngeal muscle enhancer from the Caenorhabditis elegans ceh-22 gene is targeted by the Forkhead factor PHA-4.Q47069384
Identification of direct DAF-16 targets controlling longevity, metabolism and diapause by chromatin immunoprecipitationQ47069404
The Snail-like CES-1 protein of C. elegans can block the expression of the BH3-only cell-death activator gene egl-1 by antagonizing the function of bHLH proteinsQ47069456
The C. elegans sex-determining GLI protein TRA-1A is regulated by sex-specific proteolysisQ47069490
Identification of cis-regulatory elements from the C. elegans Hox gene lin-39 required for embryonic expression and for regulation by the transcription factors LIN-1, LIN-31 and LIN-39.Q47069526
lag-1, a gene required for lin-12 and glp-1 signaling in Caenorhabditis elegans, is homologous to human CBF1 and Drosophila Su(H).Q47069543
Regulation of postembryonic G(1) cell cycle progression in Caenorhabditis elegans by a cyclin D/CDK-like complexQ47069561
The T-box transcription factors TBX-37 and TBX-38 link GLP-1/Notch signaling to mesoderm induction in C. elegans embryosQ47069575
The C. elegans CBFbeta homolog, BRO-1, regulates the proliferation, differentiation and specification of the stem cell-like seam cell lineagesQ47069599
Genomic cis-regulatory architecture and trans-acting regulators of a single interneuron-specific gene battery in C. elegansQ47397388
A gene-centered C. elegans protein-DNA interaction networkQ47594680
The TBP-like factor CeTLF is required to activate RNA polymerase II transcription during C. elegans embryogenesis.Q47822426
Caenorhabditis elegans twist plays an essential role in non-striated muscle development.Q47900059
Transcriptionally repressed germ cells lack a subpopulation of phosphorylated RNA polymerase II in early embryos of Caenorhabditis elegans and Drosophila melanogaster.Q47912453
A trans-spliced leader sequence on actin mRNA in C. elegans.Q48343028
Identification of SUMO-dependent chromatin-associated transcriptional repression components by a genome-wide RNAi screen.Q50336137
Notch-GATA synergy promotes endoderm-specific expression of ref-1 in C. elegans.Q50657632
A Lin-9 complex is recruited by B-Myb to activate transcription of G2/M genes in undifferentiated embryonal carcinoma cells.Q51791801
In vitro and in vivo characterization of Caenorhabditis elegans PHA-4/FoxA response elements.Q51904383
Somatic misexpression of germline P granules and enhanced RNA interference in retinoblastoma pathway mutants.Q52043143
The REF-1 family of bHLH transcription factors pattern C. elegans embryos through Notch-dependent and Notch-independent pathways.Q52047995
Transcriptional outputs of the Caenorhabditis elegans forkhead protein DAF-16.Q52102444
Polycomb group regulation of Hox gene expression in C. elegans.Q52104494
elt-1, a gene encoding a Caenorhabditis elegans GATA transcription factor, is highly expressed in the germ lines with msp genes as the potential targets.Q52172509
A gut-to-pharynx/tail switch in embryonic expression of the Caenorhabditis elegans ges-1 gene centers on two GATA sequences.Q52206867
DAF-16 target genes that control C. elegans life-span and metabolism.Q52604952
Maternal deployment of the embryonic SKN-1-->MED-1,2 cell specification pathway in C. elegansQ42598422
The nuclear receptor superfamily has undergone extensive proliferation and diversification in nematodesQ42692444
The polycomb complex protein mes-2/E(z) promotes the transition from developmental plasticity to differentiation in C. elegans embryos.Q43115568
Methylation and demethylation activities of a C. elegans MLL-like complex attenuate RAS signalling.Q43147808
A compendium of Caenorhabditis elegans regulatory transcription factors: a resource for mapping transcription regulatory networksQ43251350
Diversity in DNA recognition by heat shock transcription factors (HSFs) from model organismsQ43475183
Characterization of CeHDA-7, a class II histone deacetylase interacting with MEF-2 in Caenorhabditis elegansQ44020755
Cell fates and fusion in the C. elegans vulval primordium are regulated by the EGL-18 and ELT-6 GATA factors -- apparent direct targets of the LIN-39 Hox protein.Q44193732
Cis regulatory requirements for vulval cell-specific expression of the caenorhabditis elegans fibroblast growth factor gene egl-17Q44413789
A cell-specific enhancer that specifies lin-3 expression in the C. elegans anchor cell for vulval developmentQ44683376
A new class of C. elegans synMuv genes implicates a Tip60/NuA4-like HAT complex as a negative regulator of Ras signalingQ44833513
Transcriptional control and patterning of the pho-1 gene, an essential acid phosphatase expressed in the C. elegans intestineQ45284298
The unc-86 gene product couples cell lineage and cell identity in C. elegansQ45300411
Potential regulatory elements of nematode vitellogenin genes revealed by interspecies sequence comparison.Q45928004
Restriction of mesendoderm to a single blastomere by the combined action of SKN-1 and a GSK-3beta homolog is mediated by MED-1 and -2 in C. elegansQ46047227
The bZip proteins CES-2 and ATF-2 alter the timing of transcription for a cell-specific target gene in C. elegansQ46822751
Antagonistic functions of SET-2/SET1 and HPL/HP1 proteins in C. elegans developmentQ46925893
Cyclin E expression during development in Caenorhabditis elegansQ47068705
pha-4 is Ce-fkh-1, a fork head/HNF-3alpha,beta,gamma homolog that functions in organogenesis of the C. elegans pharynxQ47068744
Multiple enhancers contribute to expression of the NK-2 homeobox gene ceh-22 in C. elegans pharyngeal muscleQ47068752
The noncanonical binding site of the MED-1 GATA factor defines differentially regulated target genes in the C. elegans mesendodermQ47068778
Wnt signaling and a Hox protein cooperatively regulate psa-3/Meis to determine daughter cell fate after asymmetric cell division in C. elegans.Q47068833
Neurogenesis in the nematode Caenorhabditis elegansQ34624030
Diverse transcription factor binding features revealed by genome-wide ChIP-seq in C. elegansQ34625961
An MLL/COMPASS subunit functions in the C. elegans dosage compensation complex to target X chromosomes for transcriptional regulation of gene expressionQ34626783
Post-transcriptional regulation of the E/Daughterless ortholog HLH-2, negative feedback, and birth order bias during the AC/VU decision in C. elegansQ34642010
Identification of residues of the Caenorhabditis elegans LIN-1 ETS domain that are necessary for DNA binding and regulation of vulval cell fatesQ34645825
The C. elegans homologs of nephrocystin-1 and nephrocystin-4 are cilia transition zone proteins involved in chemosensory perceptionQ34651267
Chromatin remodelling during developmentQ34698385
The LIN-15A and LIN-56 transcriptional regulators interact to negatively regulate EGF/Ras signaling in Caenorhabditis elegans vulval cell-fate determinationQ34714971
Trans-splicing and operonsQ34720214
Members of the H3K4 trimethylation complex regulate lifespan in a germline-dependent manner in C. elegansQ34784199
The FLYWCH transcription factors FLH-1, FLH-2, and FLH-3 repress embryonic expression of microRNA genes in C. elegansQ34828352
Core promoter T-blocks correlate with gene expression levels in C. elegansQ34867860
Control of neuronal subtype identity by the C. elegans ARID protein CFI-1.Q34874075
Zinc fingers in sex determination: only one of the two C. elegans Tra-1 proteins binds DNA in vitroQ34994640
OrthoList: a compendium of C. elegans genes with human orthologsQ35007364
Using a structural and logics systems approach to infer bHLH-DNA binding specificity determinantsQ35040989
Readers of histone modificationsQ35092783
Some C. elegans class B synthetic multivulva proteins encode a conserved LIN-35 Rb-containing complex distinct from a NuRD-like complexQ35130721
The C. elegans pharynx: a model for organogenesisQ37020818
A condensin-like dosage compensation complex acts at a distance to control expression throughout the genomeQ37135166
Cis-regulatory mutations in the Caenorhabditis elegans homeobox gene locus cog-1 affect neuronal developmentQ37152773
Transcriptome profiling of the C. elegans Rb ortholog reveals diverse developmental rolesQ37188176
Linking asymmetric cell division to the terminal differentiation program of postmitotic neurons in C. elegansQ37215105
The C. elegans Snail homolog CES-1 can activate gene expression in vivo and share targets with bHLH transcription factorsQ37235372
DNA-binding specificity and in vivo targets of Caenorhabditis elegans nuclear factor I.Q37274531
X chromosome repression by localization of the C. elegans dosage compensation machinery to sites of transcription initiationQ37367035
SKN-1 domain folding and basic region monomer stabilization upon DNA bindingQ37367381
Condition-adapted stress and longevity gene regulation by Caenorhabditis elegans SKN-1/Nrf.Q37419745
Recent advances in understanding the molecular mechanisms regulating C. elegans transcriptionQ37696431
Epigenomics of centromere assembly and functionQ37776921
Decoding the histone H4 lysine 20 methylation markQ37782080
Cell signaling and transcriptional regulation via histone phosphorylationQ37861959
Regulation of organogenesis by the Caenorhabditis elegans FoxA protein PHA-4.Q38292410
Transcriptional regulation of AQP-8, a Caenorhabditis elegans aquaporin exclusively expressed in the excretory system, by the POU homeobox transcription factor CEH-6.Q38299638
Regulation of metallothionein gene transcription. Identification of upstream regulatory elements and transcription factors responsible for cell-specific expression of the metallothionein genes from Caenorhabditis elegansQ38319731
The TRA-1A sex determination protein of C. elegans regulates sexually dimorphic cell deaths by repressing the egl-1 cell death activator geneQ38321297
The DAF-3 Smad binds DNA and represses gene expression in the Caenorhabditis elegans pharynx.Q38330879
Identification of C. elegans DAF-12-binding sites, response elements, and target genesQ38335332
Regulation of sperm gene expression by the GATA factor ELT-1.Q38352378
RNA Pol II accumulates at promoters of growth genes during developmental arrest.Q38435681
Co-regulation by Notch and Fos is required for cell fate specification of intermediate precursors during C. elegans uterine developmentQ39752379
Cis-regulatory mechanisms of left/right asymmetric neuron-subtype specification in C. elegansQ39752816
Activity of a C. elegans GATA transcription factor, ELT-1, expressed in yeastQ39757513
A C. elegans E/Daughterless bHLH protein marks neuronal but not striated muscle developmentQ39758198
A model of repression: CTD analogs and PIE-1 inhibit transcriptional elongation by P-TEFbQ39895224
SKN-1 links C. elegans mesendodermal specification to a conserved oxidative stress responseQ39896060
A transcriptional regulatory cascade that controls left/right asymmetry in chemosensory neurons of C. elegansQ39896857
The FoxF/FoxC factor LET-381 directly regulates both cell fate specification and cell differentiation in C. elegans mesoderm developmentQ40002173
The spatial dynamics of tissue-specific promoters during C. elegans developmentQ40014678
Sumoylation of LIN-1 promotes transcriptional repression and inhibition of vulval cell fates.Q40462309
Locus encoding a family of small heat shock genes in Caenorhabditis elegans: two genes duplicated to form a 3.8-kilobase inverted repeatQ40666309
Transcription and translation.Q40929088
Coordinated transcriptional regulation of the unc-25 glutamic acid decarboxylase and the unc-47 GABA vesicular transporter by the Caenorhabditis elegans UNC-30 homeodomain proteinQ41680627
CeMyoD accumulation defines the body wall muscle cell fate during C. elegans embryogenesisQ41714153
Identification and analysis of internal promoters in Caenorhabditis elegans operonsQ41735826
The C. elegans NeuroD homolog cnd-1 functions in multiple aspects of motor neuron fate specification.Q41759994
Massively parallel sequencing of the polyadenylated transcriptome of C. elegansQ41941343
The C. elegans Twist target gene, arg-1, is regulated by distinct E box promoter elementsQ42123738
MIG-32 and SPAT-3A are PRC1 homologs that control neuronal migration in Caenorhabditis elegansQ42156705
C. elegans sequences that control trans-splicing and operon pre-mRNA processingQ42413466
High nucleosome occupancy is encoded at X-linked gene promoters in C. elegansQ42588662
A spatial and temporal map of C. elegans gene expressionQ42588671
A census of human transcription factors: function, expression and evolutionQ29622841
XBX-1 encodes a dynein light intermediate chain required for retrograde intraflagellar transport and cilia assembly in Caenorhabditis elegansQ30478329
SUMO regulates the assembly and function of a cytoplasmic intermediate filament protein in C. elegansQ30492693
Functional conservation between members of an ancient duplicated transcription factor family, LSF/GrainyheadQ30815054
The Caenorhabditis elegans peb-1 gene encodes a novel DNA-binding protein involved in morphogenesis of the pharynx, vulva, and hindgutQ30980715
The ELT-2 GATA-factor and the global regulation of transcription in the C. elegans intestineQ33264001
EDGEdb: a transcription factor-DNA interaction database for the analysis of C. elegans differential gene expression.Q33269614
Specificity of DNA-binding by the FAX-1 and NHR-67 nuclear receptors of Caenorhabditis elegans is partially mediated via a subclass-specific P-box residueQ33313520
The genomic distribution and function of histone variant HTZ-1 during C. elegans embryogenesisQ33369072
Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans developmentQ33449910
The landscape of C. elegans 3'UTRsQ33593704
Alternative trans-splicing of Caenorhabditis elegans sma-9/schnurri generates a short transcript that provides tissue-specific function in BMP signalingQ33611000
The C. elegans cell death specification gene ces-1 encodes a snail family zinc finger proteinQ33876675
Identification of grandchildless loci whose products are required for normal germ-line development in the nematode Caenorhabditis elegansQ33958810
Sequence requirements for myosin gene expression and regulation in Caenorhabditis elegansQ33961648
A simple method for gene expression and chromatin profiling of individual cell types within a tissueQ34000729
Targeting X chromosomes for repressionQ34003258
cdk-7 Is required for mRNA transcription and cell cycle progression in Caenorhabditis elegans embryosQ34025380
RNA polymerase II C-terminal domain phosphorylation patterns in Caenorhabditis elegans operons, polycistronic gene clusters with only one promoterQ34045680
Operons in C. elegans: polycistronic mRNA precursors are processed by trans-splicing of SL2 to downstream coding regionsQ34060309
A POP-1 repressor complex restricts inappropriate cell type-specific gene transcription during Caenorhabditis elegans embryogenesisQ34078126
A functional NR4A nuclear receptor DNA-binding domain is required for organ development in Caenorhabditis elegansQ34082563
Six and Eya promote apoptosis through direct transcriptional activation of the proapoptotic BH3-only gene egl-1 in Caenorhabditis elegansQ34100473
Chromosomal clustering of muscle-expressed genes in Caenorhabditis elegansQ34148035
The Caenorhabditis elegans heterochronic regulator LIN-14 is a novel transcription factor that controls the developmental timing of transcription from the insulin/insulin-like growth factor gene ins-33 by direct DNA bindingQ34230931
A regulatory network of T-box genes and the even-skipped homologue vab-7 controls patterning and morphogenesis in C. elegansQ34315560
Native E2F/RBF complexes contain Myb-interacting proteins and repress transcription of developmentally controlled E2F target genesQ34358237
Expression pattern, regulation, and biological role of runt domain transcription factor, run, in Caenorhabditis elegansQ34440372
Similarity of DNA binding and transcriptional regulation by Caenorhabditis elegans MAB-3 and Drosophila melanogaster DSX suggests conservation of sex determining mechanisms.Q34490364
Identification of transcription start sites of trans-spliced genes: uncovering unusual operon arrangementsQ34497400
Broad chromosomal domains of histone modification patterns in C. elegansQ34548272
A global analysis of C. elegans trans-splicingQ34548280
mec-3, a homeobox-containing gene that specifies differentiation of the touch receptor neurons in C. elegansQ34560342
synMuv B proteins antagonize germline fate in the intestine and ensure C. elegans survivalQ34592502
Caenorhabditis elegans chromosome arms are anchored to the nuclear membrane via discontinuous association with LEM-2Q34613778
P921main subjectCaenorhabditis elegansQ91703
P304page(s)1-34
P577publication date2013-06-04
P1433published inWormBookQ8036839
P1476titleTranscriptional regulation of gene expression in C. elegans

Reverse relations

cites work (P2860)
Q41991475A midgut-specific serine protease, BmSP36, is involved in dietary protein digestion in the silkworm, Bombyx mori
Q89012047Aspirin Derivative 5-(Bis(3-methylbut-2-enyl)amino)-2-hydroxybenzoic Acid Improves Thermotolerance via Stress Response Proteins in Caenorhabditis elegans
Q42266336BINDING SITE ANALYSIS OF THE CAENORHABDITIS ELEGANS NR4A NUCLEAR RECEPTOR NHR-6 DURING DEVELOPMENT.
Q45943868Chromatin accessibility dynamics reveal novel functional enhancers in C. elegans.
Q57173895Effects of liquid cultivation on gene expression and phenotype of C. elegans
Q56889474Function, dynamics and evolution of network motif modules in integrated gene regulatory networks of worm and plant
Q38812334Gene Function Prediction Based on Developmental Transcriptomes of the Two Sexes in C. elegans
Q40523140Insight into the Kluyveromyces lactis Pdr1p regulon
Q40749005Mapping and analysis of Caenorhabditis elegans transcription factor sequence specificities.
Q36381604Pheromone-sensing neurons regulate peripheral lipid metabolism in Caenorhabditis elegans
Q34046663RNA polymerase II transcription elongation and Pol II CTD Ser2 phosphorylation: A tail of two kinases
Q42359773Regulation of UNC-130/FOXD-mediated mesodermal patterning in C. elegans
Q37242505The NF-Y complex negatively regulates Caenorhabditis elegans tbx-2 expression

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