Involvement of error-prone DNA polymerase IV in stationary-phase mutagenesis in Pseudomonas putida

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Involvement of error-prone DNA polymerase IV in stationary-phase mutagenesis in Pseudomonas putida is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1128/JB.186.9.2735-2744.2004
P932PMC publication ID387815
P698PubMed publication ID15090515

P50authorMaia KivisaarQ20528388
Mariliis Tark-DameQ60605655
Radi TegovaQ60605659
Andres ToverQ60605660
P2093author name stringKairi Tarassova
P2860cites workSOS-induced DNA polymerases enhance long-term survival and evolutionary fitnessQ24530758
Evidence that selected amplification of a bacterial lac frameshift allele stimulates Lac(+) reversion (adaptive mutation) with or without general hypermutabilityQ24542676
All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesisQ24597093
Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in transQ24597491
Adaptive mutation: implications for evolutionQ24623723
Multiple pathways for SOS-induced mutagenesis in Escherichia coli: an overexpression of dinB/dinP results in strongly enhancing mutagenesis in the absence of any exogenous treatment to damage DNAQ24628966
Construction and characterization of new cloning vehicle. II. A multipurpose cloning systemQ28298407
Comparative gene expression profiles following UV exposure in wild-type and SOS-deficient Escherichia coliQ28364148
Error-prone DNA polymerases: novel structures and the benefits of infidelityQ28646690
The Y-family of DNA polymerasesQ29615308
The distribution of the numbers of mutants in bacterial populationsQ29620123
Are adaptive mutations due to a decline in mismatch repair? The evidence is lackingQ33545737
Adaptive mutation sequences reproduced by mismatch repair deficiencyQ33640315
Mismatch repair is diminished during stationary-phase mutationQ33698771
cAMP-dependent SOS induction and mutagenesis in resting bacterial populations.Q33719467
Determining mutation rates in bacterial populationsQ33803752
Mechanisms of stationary phase mutation: a decade of adaptive mutationQ33847662
The SOS response regulates adaptive mutationQ33903483
SOS mutator DNA polymerase IV functions in adaptive mutation and not adaptive amplificationQ33953638
Adaptive reversion of a frameshift mutation in Escherichia coliQ33958142
Two enzymes, both of which process recombination intermediates, have opposite effects on adaptive mutation in Escherichia coli.Q33966542
Opposing roles of the holliday junction processing systems of Escherichia coli in recombination-dependent adaptive mutationQ33966750
Escherichia coli DNA polymerase IV mutator activity: genetic requirements and mutational specificityQ33994529
Amplification-mutagenesis: evidence that "directed" adaptive mutation and general hypermutability result from growth with a selected gene amplificationQ34012598
Error‐prone DNA polymerase IV is controlled by the stress‐response sigma factor, RpoS, in Escherichia coliQ34049897
The causes of Pseudomonas diversityQ34055049
Adaptive mutation in Escherichia coliQ34088211
Error-prone repair DNA polymerases in prokaryotes and eukaryotesQ34131455
Second-order selection in bacterial evolution: selection acting on mutation and recombination rates in the course of adaptationQ34203956
Evolving responsively: adaptive mutationQ34297067
Adaptive, or stationary-phase, mutagenesis, a component of bacterial differentiation in Bacillus subtilisQ34436201
Regulating general mutation rates: examination of the hypermutable state model for Cairnsian adaptive mutation.Q34617476
Specialized DNA polymerases, cellular survival, and the genesis of mutationsQ34662609
Roles of YqjH and YqjW, homologs of the Escherichia coli UmuC/DinB or Y superfamily of DNA polymerases, in stationary-phase mutagenesis and UV-induced mutagenesis of Bacillus subtilisQ34810207
Control of rpoS transcription in Escherichia coli and Pseudomonas: why so different?Q35161491
Mismatch repair protein MutL becomes limiting during stationary-phase mutationQ35190848
Stationary phase mutagenesis: mechanisms that accelerate adaptation of microbial populations under environmental stressQ35544150
Negative regulation of mutS and mutH repair gene expression by the Hfq and RpoS global regulators of Escherichia coli K-12.Q35633546
An aromatic effector specificity mutant of the transcriptional regulator DmpR overcomes the growth constraints of Pseudomonas sp. strain CF600 on para-substituted methylphenolsQ35983770
Promoter-creating mutations in Pseudomonas putida: a model system for the study of mutation in starving bacteriaQ36079713
Adaptive mutation: General mutagenesis is not a programmed response to stress but results from rare coamplification of dinB with lacQ36689838
Resistance to ultraviolet light in Pseudomonas syringae: sequence and functional analysis of the plasmid-encoded rulAB genesQ36832867
Mutagenesis and inducible responses to deoxyribonucleic acid damage in Escherichia coliQ37060983
Stationary-phase mutation in the bacterial chromosome: recombination protein and DNA polymerase IV dependenceQ37096423
Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteriaQ37608709
Regulation of the rulAB mutagenic DNA repair operon of Pseudomonas syringae by UV-B (290 to 320 nanometers) radiation and analysis of rulAB-mediated mutability in vitro and in plantaQ39501119
Involvement of sigma(S) in starvation-induced transposition of Pseudomonas putida transposon Tn4652.Q39504849
Expression of the transposase gene tnpA of Tn4652 is positively affected by integration host factor.Q39566174
Effects of combination of different -10 hexamers and downstream sequences on stationary-phase-specific sigma factor sigma(S)-dependent transcription in Pseudomonas putidaQ39587976
Different spectra of stationary-phase mutations in early-arising versus late-arising mutants of Pseudomonas putida: involvement of the DNA repair enzyme MutY and the stationary-phase sigma factor RpoS.Q39680847
Formation of an F' plasmid by recombination between imperfectly repeated chromosomal Rep sequences: a closer look at an old friend (F'(128) pro lac).Q39714248
Depletion of the cellular amounts of the MutS and MutH methyl-directed mismatch repair proteins in stationary-phase Escherichia coli K-12 cellsQ39841075
Improved oligonucleotide site-directed mutagenesis using M13 vectors.Q40470764
Mechanisms of directed mutationQ41110210
An aerobic recA-, umuC-dependent pathway of spontaneous base-pair substitution mutagenesis in Escherichia coliQ42498856
Growth medium composition-determined regulatory mechanisms are superimposed on CatR-mediated transcription from the pheBA and catBCA promoters in Pseudomonas putidaQ43701742
Genetics of mutagenesis in E. coli: various combinations of translesion polymerases (Pol II, IV and V) deal with lesion/sequence context diversityQ44267628
Stress-induced mutagenesis in bacteriaQ44459277
Sequence of the gene (pheA) encoding phenol monooxygenase from Pseudomonas sp. EST1001: expression in Escherichia coli and Pseudomonas putidaQ48222143
New broad-host-range promoter probe vectors based on the plasmid RK2 repliconQ48382517
Preparation of electrocompetent E. coli using salt-free growth medium.Q54597068
Recombination in adaptive mutation.Q54635736
Analysis of the DNA damage-mediated induction of Pseudomonas putida and Pseudomonas aeruginosa lexA genes.Q54656735
Two modes of loss of the Tol function from Pseudomonas putida mt-2Q67660064
Activity of the hybrid trp-lac (tac) promoter of Escherichia coli in Pseudomonas putida. Construction of broad-host-range, controlled-expression vectorsQ70196959
P433issue9
P407language of work or nameEnglishQ1860
P921main subjectPseudomonas putidaQ2738168
P304page(s)2735-2744
P577publication date2004-05-01
P1433published inJournal of BacteriologyQ478419
P1476titleInvolvement of error-prone DNA polymerase IV in stationary-phase mutagenesis in Pseudomonas putida
P478volume186

Reverse relations

cites work (P2860)
Q42948978A DNA polymerase V homologue encoded by TOL plasmid pWW0 confers evolutionary fitness on Pseudomonas putida under conditions of environmental stress
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Q29346807Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin
Q43264411Degradation of nitroaromatic compounds: a model to study evolution of metabolic pathways
Q41915989Elevated mutation frequency in surviving populations of carbon-starved rpoS-deficient Pseudomonas putida is caused by reduced expression of superoxide dismutase and catalase
Q36369839Long-term survival during stationary phase: evolution and the GASP phenotype
Q35864947MsDpo4-a DinB Homolog from Mycobacterium smegmatis-Is an Error-Prone DNA Polymerase That Can Promote G:T and T:G Mismatches
Q37512348Multiple strategies for translesion synthesis in bacteria
Q39713077MutS regulates access of the error-prone DNA polymerase Pol IV to replication sites: a novel mechanism for maintaining replication fidelity
Q33373675Mutability and importance of a hypermutable cell subpopulation that produces stress-induced mutants in Escherichia coli
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Q34465215Mutation frequency and spectrum of mutations vary at different chromosomal positions of Pseudomonas putida
Q42412527Oxidative DNA damage defense systems in avoidance of stationary-phase mutagenesis in Pseudomonas putida
Q38309969PBP3 inhibition elicits adaptive responses in Pseudomonas aeruginosa.
Q29346764Role of Pseudomonas aeruginosa dinB-encoded DNA polymerase IV in mutagenesis
Q33769195Role of the DinB homologs Rv1537 and Rv3056 in Mycobacterium tuberculosis
Q30974317Simple sequence repeats and mucoid conversion: biased mucA mutagenesis in mismatch repair-deficient Pseudomonas aeruginosa.
Q37710717Stationary phase in gram-negative bacteria.
Q40459862Stress-Induced Mutagenesis.
Q37355812Stress-induced beta-lactam antibiotic resistance mutation and sequences of stationary-phase mutations in the Escherichia coli chromosome.
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Q27681904The PAD region in the mycobacterial DinB homologue MsPolIV exhibits positional heterogeneity
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Q41991047Transcription-associated mutation in Bacillus subtilis cells under stress
Q34974987Tuberculosis chemotherapy: the influence of bacillary stress and damage response pathways on drug efficacy
Q28533745nfxB as a novel target for analysis of mutation spectra in Pseudomonas aeruginosa

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