| scholarly article | Q13442814 |
| P50 | author | Paul W. Sternberg | Q55778919 |
| Margaret C Ho | Q57330042 | ||
| Porfirio Quintero-Cadena | Q57340531 | ||
| P2093 | author name string | Margaret C W Ho | |
| P2860 | cites work | Ultrafast and memory-efficient alignment of short DNA sequences to the human genome | Q21183894 |
| An integrated encyclopedia of DNA elements in the human genome | Q22122150 | ||
| The accessible chromatin landscape of the human genome | Q24595581 | ||
| High-resolution genome-wide in vivo footprinting of diverse transcription factors in human cells | Q24614543 | ||
| Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach | Q24796408 | ||
| Condensin controls recruitment of RNA polymerase II to achieve nematode X-chromosome dosage compensation. | Q36942407 | ||
| From genes to function: the C. elegans genetic toolbox | Q36960940 | ||
| To grow or not to grow: nutritional control of development during Caenorhabditis elegans L1 arrest | Q36972178 | ||
| Multigenome DNA sequence conservation identifies Hox cis-regulatory elements | Q36995310 | ||
| Epidermal morphogenesis | Q37020477 | ||
| The landscape of RNA polymerase II transcription initiation in C. elegans reveals promoter and enhancer architectures | Q37061192 | ||
| Global mapping of protein-DNA interactions in vivo by digital genomic footprinting | Q37157318 | ||
| Caudal-like PAL-1 directly activates the bodywall muscle module regulator hlh-1 in C. elegans to initiate the embryonic muscle gene regulatory network | Q37204828 | ||
| Recent advances in understanding the molecular mechanisms regulating C. elegans transcription | Q37696431 | ||
| Genomics of long-range regulatory elements | Q37741229 | ||
| Regulation of organogenesis by the Caenorhabditis elegans FoxA protein PHA-4. | Q38292410 | ||
| RNA Pol II accumulates at promoters of growth genes during developmental arrest. | Q38435681 | ||
| DAF-16/FOXO regulates transcription of cki-1/Cip/Kip and repression of lin-4 during C. elegans L1 arrest. | Q38444403 | ||
| Chromatin accessibility pre-determines glucocorticoid receptor binding patterns. | Q39604123 | ||
| Multidimensional regulation of gene expression in the C. elegans embryo | Q39628462 | ||
| Detection of broadly expressed neuronal genes in C. elegans | Q40278363 | ||
| Fast, sensitive discovery of conserved genome-wide motifs | Q40863378 | ||
| PQM-1 complements DAF-16 as a key transcriptional regulator of DAF-2-mediated development and longevity | Q42585902 | ||
| A spatial and temporal map of C. elegans gene expression | Q42588671 | ||
| The homeoproteins MAB-18 and CEH-14 insulate the dauer collagen gene col-43 from activation by the adjacent promoter of the Spermatheca gene sth-1 in Caenorhabditis elegans | Q42652465 | ||
| The LIM homeobox gene ceh-14 is required for phasmid function and neurite outgrowth | Q45819556 | ||
| pha-4 is Ce-fkh-1, a fork head/HNF-3alpha,beta,gamma homolog that functions in organogenesis of the C. elegans pharynx | Q47068744 | ||
| Anterior organization of the Caenorhabditis elegans embryo by the labial-like Hox gene ceh-13. | Q47068874 | ||
| The GATA-factor elt-2 is essential for formation of the Caenorhabditis elegans intestine | Q47069157 | ||
| Multiple regulatory elements with spatially and temporally distinct activities control the expression of the epithelial differentiation gene lin-26 in C. elegans | Q47255056 | ||
| Genome-scale analysis of in vivo spatiotemporal promoter activity in Caenorhabditis elegans. | Q47575778 | ||
| The in vivo dissection of direct RFX-target gene promoters in C. elegans reveals a novel cis-regulatory element, the C-box | Q47643022 | ||
| Elements regulating cell- and stage-specific expression of the C. elegans MyoD family homolog hlh-1. | Q47923846 | ||
| Patterning of the Caenorhabditis elegans head region by the Pax-6 family member vab-3. | Q48070743 | ||
| Mapping and dynamics of regulatory DNA and transcription factor networks in A. thaliana. | Q50634684 | ||
| Whole-genome analysis of temporal gene expression during foregut development | Q24801913 | ||
| GEI-8, a homologue of vertebrate nuclear receptor corepressor NCoR/SMRT, regulates gonad development and neuronal functions in Caenorhabditis elegans | Q27334952 | ||
| Genome-wide identification of binding sites defines distinct functions for Caenorhabditis elegans PHA-4/FOXA in development and environmental response | Q27348311 | ||
| Genes that act downstream of DAF-16 to influence the lifespan of Caenorhabditis elegans | Q27860971 | ||
| Genome-wide location and function of DNA binding proteins | Q28131765 | ||
| Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome | Q28131828 | ||
| ChIP-seq accurately predicts tissue-specific activity of enhancers | Q28235102 | ||
| Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project | Q28301622 | ||
| The glyoxylate shunt is essential for desiccation tolerance in C. elegans and budding yeast | Q28833466 | ||
| BEDTools: a flexible suite of utilities for comparing genomic features | Q29547332 | ||
| Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing | Q29618021 | ||
| Pybedtools: a flexible Python library for manipulating genomic datasets and annotations | Q30429349 | ||
| The ELT-2 GATA-factor and the global regulation of transcription in the C. elegans intestine | Q33264001 | ||
| Function of the PHA-4/FOXA transcription factor during C. elegans post-embryonic development | Q33321969 | ||
| ELT-2 is the predominant transcription factor controlling differentiation and function of the C. elegans intestine, from embryo to adult. | Q33396126 | ||
| Pol II docking and pausing at growth and stress genes in C. elegans | Q33631279 | ||
| SLR-2 and JMJC-1 regulate an evolutionarily conserved stress-response network | Q33690581 | ||
| DREME: motif discovery in transcription factor ChIP-seq data | Q33890212 | ||
| Sequence requirements for myosin gene expression and regulation in Caenorhabditis elegans | Q33961648 | ||
| Nuclease hypersensitive sites in chromatin | Q34164152 | ||
| Bifunctional glyoxylate cycle protein of Caenorhabditis elegans: a developmentally regulated protein of intestine and muscle | Q34313077 | ||
| DNase I-hypersensitive exons colocalize with promoters and distal regulatory elements | Q34352768 | ||
| WormBase 2014: new views of curated biology | Q34382790 | ||
| DNase footprint signatures are dictated by factor dynamics and DNA sequence | Q34746845 | ||
| Core promoter T-blocks correlate with gene expression levels in C. elegans | Q34867860 | ||
| pha-4, an HNF-3 homolog, specifies pharyngeal organ identity in Caenorhabditis elegans | Q35204451 | ||
| Cell type-specific affinity purification of nuclei for chromatin profiling in whole animals | Q35327795 | ||
| Dynamic reprogramming of chromatin accessibility during Drosophila embryo development | Q35561152 | ||
| Direct visualization of the elt-2 gut-specific GATA factor binding to a target promoter inside the living Caenorhabditis elegans embryo | Q35718550 | ||
| PHA-4/FoxA cooperates with TAM-1/TRIM to regulate cell fate restriction in the C. elegans foregut | Q35758336 | ||
| BEDOPS: high-performance genomic feature operations | Q36076319 | ||
| Nutritional control of mRNA isoform expression during developmental arrest and recovery in C. elegans | Q36285402 | ||
| The function and regulation of the GATA factor ELT-2 in the C. elegans endoderm | Q36597434 | ||
| The embryonic muscle transcriptome of Caenorhabditis elegans | Q36643272 | ||
| The Caenorhabditis elegans NK-2 class homeoprotein CEH-22 is involved in combinatorial activation of gene expression in pharyngeal muscle. | Q36723251 | ||
| P433 | issue | 12 | |
| P921 | main subject | Caenorhabditis elegans | Q91703 |
| P304 | page(s) | 2108-2119 | |
| P577 | publication date | 2017-10-26 | |
| P1433 | published in | Genome Research | Q5533485 |
| P1476 | title | Genome-wide discovery of active regulatory elements and transcription factor footprints in Caenorhabditis elegans using DNase-seq | |
| P478 | volume | 27 |
Search more.