Transcriptome complexity and riboregulation in the human pathogen Helicobacter pylori

scientific article

Transcriptome complexity and riboregulation in the human pathogen Helicobacter pylori is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P356DOI10.3389/FCIMB.2012.00014
P8608Fatcat IDrelease_iqzezhnrgreh7br23d26xy2hsu
P932PMC publication ID3417511
P698PubMed publication ID22919606
P5875ResearchGate publication ID230736117

P50authorCynthia SharmaQ22951263
P2093author name stringSandy R. Pernitzsch
P2860cites workTrans-translation in Helicobacter pylori: essentiality of ribosome rescue and requirement of protein tagging for stress resistance and competenceQ21144203
The complete genome sequence of the gastric pathogen Helicobacter pyloriQ22122352
The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequencesQ22122402
A small RNA regulates the expression of genes involved in iron metabolism in Escherichia coliQ24536169
6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoterQ24537417
Staphylococcus aureus RNAIII and the endoribonuclease III coordinately regulate spa gene expressionQ24556609
Regulatory RNAs in bacteriaQ24595082
RNA-Seq: a revolutionary tool for transcriptomicsQ24596169
Identification of Helicobacter pylori genes that contribute to stomach colonizationQ24678679
Staphylococcus aureus RNAIII coordinately represses the synthesis of virulence factors and the transcription regulator Rot by an antisense mechanismQ24681092
Identification of 17 Pseudomonas aeruginosa sRNAs and prediction of sRNA-encoding genes in 10 diverse pathogens using the bioinformatic tool sRNAPredict2Q24685579
Regulation by small RNAs in bacteria: expanding frontiersQ27009044
Campylobacter jejuni: molecular biology and pathogenesisQ36912126
6S RNA: a regulator of transcriptionQ36917127
The 3'-to-5' exoribonuclease (encoded by HP1248) of Helicobacter pylori regulates motility and apoptosis-inducing genesQ37157042
Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional levelQ37444341
Computational prediction of sRNAs and their targets in bacteria.Q37671500
The role of Hfq in bacterial pathogensQ37676558
Small RNA-mediated regulation at the level of transcript stabilityQ37706896
Studying bacterial transcriptomes using RNA-seqQ37796158
cis-antisense RNA, another level of gene regulation in bacteria.Q37850790
Posttranscriptional regulation of flagellin synthesis in Helicobacter pylori by the RpoN chaperone HP0958.Q38359931
Characterization of components of the Staphylococcus aureus mRNA degradosome holoenzyme-like complexQ38630868
Quantitative RNA-seq analysis of the Campylobacter jejuni transcriptomeQ42172392
Identification of the urease operon in Helicobacter pylori and its control by mRNA decay in response to pH.Q42627534
Global regulation of virulence and the stress response by CsrA in the highly adapted human gastric pathogen Helicobacter pylori.Q45260465
A small, stable RNA induced by oxidative stress: role as a pleiotropic regulator and antimutatorQ48047346
Bacillus subtilis ribonucleases J1 and J2 form a complex with altered enzyme behaviour.Q53352951
Staphylococcus aureus endoribonuclease III purification and properties.Q54410493
Identification of small noncoding RNAs in Helicobacter pylori by a bioinformatics-based approach.Q54411459
Efficient degradation and expression prioritization with small RNAs.Q54433113
Synthesis-mediated release of a small RNA inhibitor of RNA polymerase.Q54450635
6S RNA regulates E. coli RNA polymerase activityQ28140651
mRNA-Seq whole-transcriptome analysis of a single cellQ28240611
A highly conserved 6S RNA structure is required for regulation of transcriptionQ28241931
The primary transcriptome of the major human pathogen Helicobacter pyloriQ28273545
Regulatory RNA in bacterial pathogensQ28288142
CsrB sRNA family: sequestration of RNA-binding regulatory proteinsQ28294761
Acid-induced activation of the urease promoters is mediated directly by the ArsRS two-component system of Helicobacter pyloriQ29346539
Hfq and its constellation of RNAQ29615791
RNase E-based ribonucleoprotein complexes: mechanical basis of mRNA destabilization mediated by bacterial noncoding RNAsQ29619938
Antisense RNA modulation of alkyl hydroperoxide reductase levels in Helicobacter pylori correlates with organic peroxide toxicity but not infectivity.Q30444464
The Helicobacter pylori chemotaxis receptor TlpB (HP0103) is required for pH taxis and for colonization of the gastric mucosaQ30446575
Global transposon mutagenesis and essential gene analysis of Helicobacter pyloriQ31129026
Screening and identification of natural antisense transcripts in Helicobacter pylori by a novel approach based on RNase I protection assayQ33395421
Small RNA as global regulator of carbon catabolite repression in Pseudomonas aeruginosaQ33564767
Colonization and inflammation deficiencies in Mongolian gerbils infected by Helicobacter pylori chemotaxis mutantsQ33716058
Legionella pneumophila 6S RNA optimizes intracellular multiplicationQ33842112
Target identification of small noncoding RNAs in bacteriaQ34004747
Next generation sequencing of microbial transcriptomes: challenges and opportunities.Q34019275
Base pairing small RNAs and their roles in global regulatory networksQ34061171
Post-transcriptional global regulation by CsrA in bacteriaQ34113865
Acis-Encoded Antisense Small RNA Regulated by the HP0165-HP0166 Two-Component System Controls Expression ofureBinHelicobacter pyloriQ34145427
Bacterial antisense RNAs: how many are there, and what are they doing?Q34537427
Transcript amplification from single bacterium for transcriptome analysisQ34628940
Identification of bacterial small non-coding RNAs: experimental approachesQ34635147
Experimental approaches for the discovery and characterization of regulatory small RNA.Q35003330
Activation of gene expression by small RNA.Q35010723
A highly conserved protein of unknown function in Sinorhizobium meliloti affects sRNA regulation similar to Hfq.Q35040974
RodZ regulates the post-transcriptional processing of the Shigella sonnei type III secretion systemQ35194777
Genome-wide antisense transcription drives mRNA processing in bacteriaQ35647819
Helicobacter pylori chemotaxis modulates inflammation and bacterium-gastric epithelium interactions in infected mice.Q35949853
Helicobacter pylori perceives the quorum-sensing molecule AI-2 as a chemorepellent via the chemoreceptor TlpB.Q35959831
Helicobacter pylori in health and diseaseQ36816611
Proteins that interact with bacterial small RNA regulatorsQ36892912
P275copyright licenseCreative Commons Attribution-NonCommercialQ6936496
P407language of work or nameEnglishQ1860
P921main subjectbacteriaQ10876
Helicobacter pyloriQ180556
Helicobacter pylori infectious diseaseQ4497153
transcriptomeQ252857
regulation of gene expressionQ411391
RNA sequencingQ2542347
bacterial gene expression regulationQ71131082
P304page(s)14
P577publication date2012-01-01
2012-02-21
P1433published inFrontiers in Cellular and Infection MicrobiologyQ27724376
P1476titleTranscriptome complexity and riboregulation in the human pathogen Helicobacter pylori
P478volume2

Reverse relations

cites work (P2860)
Q34400711A variable homopolymeric G-repeat defines small RNA-mediated posttranscriptional regulation of a chemotaxis receptor in Helicobacter pylori
Q35825812Conservation of σ28-Dependent Non-Coding RNA Paralogs and Predicted σ54-Dependent Targets in Thermophilic Campylobacter Species.
Q40306097Cooperation of Gastric Mononuclear Phagocytes with Helicobacter pylori during Colonization
Q35101934Helicobacter pylori: Genomic Insight into the Host-Pathogen Interaction
Q30847761Mechanistic insights into type I toxin antitoxin systems in Helicobacter pylori: the importance of mRNA folding in controlling toxin expression
Q36840490Methodologies to decipher the cell secretome
Q34494038Modeling the Regulatory Mechanisms by Which NLRX1 Modulates Innate Immune Responses to Helicobacter pylori Infection
Q91963984Multiple Sense and Antisense Promoters Contribute to the Regulated Expression of the isc-suf Operon for Iron-Sulfur Cluster Assembly in Rhodobacter
Q36791586RNase J depletion leads to massive changes in mRNA abundance in Helicobacter pylori.
Q42418517Research advances in the study of Campylobacter, Helicobacter, and related organisms
Q55251083The Sole DEAD-Box RNA Helicase of the Gastric Pathogen Helicobacter pylori Is Essential for Colonization.
Q34513346The cag-pathogenicity island encoded CncR1 sRNA oppositely modulates Helicobacter pylori motility and adhesion to host cells

Search more.