Structural and functional characterization of Rpn12 identifies residues required for Rpn10 proteasome incorporation

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Structural and functional characterization of Rpn12 identifies residues required for Rpn10 proteasome incorporation is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1042/BJ20120542
P8608Fatcat IDrelease_gv3qgm4tj5bh7e7yfomt4toauu
P932PMC publication ID3481250
P698PubMed publication ID22906049

P2093author name stringEdward D Lowe
Jane A Endicott
Colin Gordon
Martin E M Noble
Dominique Smith
Konstantinos Paraskevopoulos
Jonas Boehringer
Christiane Riedinger
Christina Khoudian
Eachan O D Johnson
P2860cites workIdentification of a functional docking site in the Rpn1 LRR domain for the UBA-UBL domain protein Ddi1Q21245310
PHENIX: a comprehensive Python-based system for macromolecular structure solutionQ24654617
Prediction of a common structural scaffold for proteasome lid, COP9-signalosome and eIF3 complexesQ24811581
ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structuresQ24812180
A short history of SHELXQ25938995
Proteasome subunit Rpn13 is a novel ubiquitin receptorQ27650664
The Arabidopsis COP9 Signalosome Subunit 7 Is a Model PCI Domain Protein with Subdomains Involved in COP9 Signalosome AssemblyQ27652505
Structure of Proteasome Ubiquitin Receptor hRpn13 and Its Activation by the Scaffolding Protein hRpn2Q27661655
Structure of Rpn10 and Its Interactions with Polyubiquitin Chains and the Proteasome Subunit Rpn12Q27664179
The proteasomal subunit Rpn6 is a molecular clamp holding the core and regulatory subcomplexes togetherQ27676340
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Protein production by auto-induction in high density shaking culturesQ27860514
Clustal W and Clustal X version 2.0Q27860517
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Amino acid substitutions in structurally related proteins. A pattern recognition approach. Determination of a new and efficient scoring matrix.Q52546821
Analysis of a gene encoding Rpn10 of the fission yeast proteasome reveals that the polyubiquitin-binding site of this subunit is essential when Rpn12/Mts3 activity is compromised.Q52579023
Ubiquitylation of Drosophila p54/Rpn10/S5a regulates its interaction with the UBA-UBL polyubiquitin receptors.Q52734646
NMR View: A computer program for the visualization and analysis of NMR dataQ27860951
The CCP4 suite: programs for protein crystallographyQ27861090
Proteasome subunit Rpn1 binds ubiquitin-like protein domainsQ27930136
Functional analysis of Rpn6p, a lid component of the 26 S proteasome, using temperature-sensitive rpn6 mutants of the yeast Saccharomyces cerevisiaeQ27931530
Proteasomal proteomics: identification of nucleotide-sensitive proteasome-interacting proteins by mass spectrometric analysis of affinity-purified proteasomesQ27931576
Identification of ubiquitin-like protein-binding subunits of the 26S proteasomeQ27931789
Subunit interaction maps for the regulatory particle of the 26S proteasome and the COP9 signalosome.Q27931947
Rpn7 Is required for the structural integrity of the 26 S proteasome of Saccharomyces cerevisiaeQ27933731
Incorporation of the Rpn12 subunit couples completion of proteasome regulatory particle lid assembly to lid-base joiningQ28256050
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopyQ28256624
Complete subunit architecture of the proteasome regulatory particleQ28257212
Molecular architecture of the 26S proteasome holocomplex determined by an integrative approachQ28259014
Rpn1 and Rpn2 coordinate ubiquitin processing factors at proteasomeQ28259286
Crystal structure of human eIF3k, the first structure of eIF3 subunitsQ28265251
Dissection of the assembly pathway of the proteasome lid in Saccharomyces cerevisiaeQ28282533
TPR proteins: the versatile helixQ29547585
Recognition and processing of ubiquitin-protein conjugates by the proteasomeQ29547616
Molecular genetic analysis of fission yeast Schizosaccharomyces pombeQ29547703
A 26 S protease subunit that binds ubiquitin conjugatesQ29614362
The 26S proteasome: a molecular machine designed for controlled proteolysisQ29619692
Structural organization of the 19S proteasome lid: insights from MS of intact complexes.Q33251840
Assembly, structure, and function of the 26S proteasome.Q33988314
The COP9 signalosome: more than a proteaseQ34014197
PCI complexes: pretty complex interactions in diverse signaling pathways.Q34331512
Analysis of protein-ligand interactions by fluorescence polarizationQ35177806
A conditional lethal mutant in the fission yeast 26 S protease subunit mts3+ is defective in metaphase to anaphase transitionQ36797998
Extraproteasomal Rpn10 restricts access of the polyubiquitin-binding protein Dsk2 to proteasome.Q37098025
Catalytic mechanism and assembly of the proteasome.Q37407654
PCI complexes: Beyond the proteasome, CSN, and eIF3 Troika.Q37580456
Translational control in cancer.Q37717999
Multiubiquitin chain binding and protein degradation are mediated by distinct domains within the 26 S proteasome subunit Mcb1.Q38340703
Together, Rpn10 and Dsk2 can serve as a polyubiquitin chain-length sensorQ42936102
pDUAL, a multipurpose, multicopy vector capable of chromosomal integration in fission yeastQ45152137
A vector system for genomic FLAG epitope-tagging in Schizosaccharomyces pombeQ45170776
Subunit-subunit interactions in the human 26S proteasomeQ47983972
A new essential gene of Saccharomyces cerevisiae, a defect in it may result in instability of nucleusQ48175521
P275copyright licenseCreative Commons Attribution-NonCommercial 2.5 GenericQ19113746
P6216copyright statuscopyrightedQ50423863
P4510describes a project that usesImageQuantQ112270642
P433issue1
P407language of work or nameEnglishQ1860
P921main subjectcell biologyQ7141
P304page(s)55-65
P577publication date2012-11-15
P1433published inBiochemical JournalQ864221
P1476titleStructural and functional characterization of Rpn12 identifies residues required for Rpn10 proteasome incorporation
P478volume448

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cites work (P2860)
Q36568548Atomic structure of the 26S proteasome lid reveals the mechanism of deubiquitinase inhibition.
Q27694578Crystal structure of the human COP9 signalosome
Q38993202De Novo Disruption of the Proteasome Regulatory Subunit PSMD12 Causes a Syndromic Neurodevelopmental Disorder
Q24567788Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome
Q30371194Solution structure of yeast Rpn9: insights into proteasome lid assembly
Q37469477Structural basis for dynamic regulation of the human 26S proteasome
Q38081952Structural biology of the proteasome
Q53831231Structural mechanism for nucleotide-driven remodeling of the AAA-ATPase unfoldase in the activated human 26S proteasome.
Q98242725The Caenorhabditis elegans proteasome subunit RPN-12 is required for hermaphrodite germline sex determination and oocyte quality
Q40516887The degradation of p53 and its major E3 ligase Mdm2 is differentially dependent on the proteasomal ubiquitin receptor S5a.
Q101409898The nuclear pore primes recombination-dependent DNA synthesis at arrested forks by promoting SUMO removal
Q34623947The proteasome under the microscope: the regulatory particle in focus

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