Construction of a genetic toggle switch in Escherichia coli (scientific article (publication date: 20 January 2000))

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Q35978503	Dual control system - A novel scaffolding architecture of an inducible regulatory device for the precise regulation of gene expression
Q38309176	Dynamic membrane patterning, signal localization and polarity in living cells.
Q47590195	Dynamic metabolic engineering for increasing bioprocess productivity
Q36238821	Dynamic metabolic engineering: New strategies for developing responsive cell factories
Q34314357	Dynamic regulation of myosin light chain phosphorylation by Rho-kinase.
Q51617010	Dynamic stabilization in the PU1-GATA1 circuit using a model with time-dependent kinetic change.
Q51949944	Dynamical advantages of scale-free networks.
Q51657216	Dynamical properties of the repressilator model.
Q36104888	Dynamical systems approach to endothelial heterogeneity
Q35102173	Dynamical systems theory in physiology
Q57942506	Dynamics in high-dimensional model gene networks
Q37814778	Dynamics in the mixed microbial concourse
Q58049367	Dynamics of a genetic toggle switch at the nucleotide and codon levels
Q51895646	Dynamics of a two-dimensional model of cell tissues with coupled stochastic gene networks.
Q51575790	Dynamics of coupled repressilators: the role of mRNA kinetics and transcription cooperativity.
Q51628719	Dynamics of gene regulatory networks with cell division cycle.
Q35194039	Dynamics of single-cell gene expression
Q42624814	Dynamics of transcription driven by the tetA promoter, one event at a time, in live Escherichia coli cells
Q39264523	Early gene regulation of osteogenesis in embryonic stem cells.
Q35694371	Effect of Intrinsic Noise on the Phenotype of Cell Populations Featuring Solution Multiplicity: An Artificial lac Operon Network Paradigm
Q28584416	Effects of cell-cycle-dependent expression on random fluctuations in protein levels
Q51908864	Effects of coupling strength and space on the dynamics of coupled toggle switches in stochastic gene networks with multiple-delayed reactions.
Q35529184	Effects of downstream genes on synthetic genetic circuits.
Q35051451	Effects of multimerization on the temporal variability of protein complex abundance
Q50471371	Effects of temperature on the dynamics of the LacI-TetR-CI repressilator.
Q36240474	Efficient Switches in Biology and Computer Science
Q33649936	Efficient computation of parameter sensitivities of discrete stochastic chemical reaction networks
Q47107934	Efflux Pump Control Alters Synthetic Gene Circuit Function.
Q37658992	Emergence of function from coordinated cells in a tissue
Q21145326	Emergence of switch-like behavior in a large family of simple biochemical networks
Q43760764	Emergence of synthetic biology: characterization by a scientometric approach
Q30495631	Emergent bistability by a growth-modulating positive feedback circuit
Q51418749	Emergent bistability: effects of additive and multiplicative noise.
Q37962354	Emerging biomedical applications of synthetic biology
Q41976051	Enabling the new biology of the 21(st) century
Q59336021	Encryption and steganography of synthetic gene circuits
Q44924015	Endowing cells with logic and memory
Q40195519	Engineered bacteria can function in the mammalian gut long-term as live diagnostics of inflammation
Q47588261	Engineered bacteria self-organize to sense pressure
Q56984534	Engineered dCas9 with reduced toxicity in bacteria: implications for genetic circuit design
Q34997456	Engineered gene circuits.
Q38084923	Engineered genetic information processing circuits
Q33564662	Engineered microbial biosensors based on bacterial two-component systems as synthetic biotechnology platforms in bioremediation and biorefinery
Q89685405	Engineered probiotics for local tumor delivery of checkpoint blockade nanobodies
Q99207479	Engineered systems of inducible anti-repressors for the next generation of biological programming
Q37519764	Engineered temperature compensation in a synthetic genetic clock.
Q21131321	Engineered transcriptional systems for cyanobacterial biotechnology
Q92488848	Engineering DNA recognition and allosteric response properties of TetR family proteins by using a module-swapping strategy
Q90352644	Engineering Epigenetic Regulation Using Synthetic Read-Write Modules
Q38009596	Engineering and control of biological systems: A new way to tackle complex diseases.
Q49339110	Engineering bacteria for diagnostic and therapeutic applications.
Q36304169	Engineering dynamic cell cycle control with synthetic small molecule-responsive RNA devices
Q37450926	Engineering dynamical control of cell fate switching using synthetic phospho-regulons
Q24794656	Engineering gene networks to emulate Drosophila embryonic pattern formation
Q50849632	Engineering genetic circuits that compute and remember.
Q35088032	Engineering ligand-responsive RNA controllers in yeast through the assembly of RNase III tuning modules
Q37185202	Engineering microbial consortia for controllable outputs
Q35974660	Engineering microbial systems to explore ecological and evolutionary dynamics
Q38924442	Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology
Q34320464	Engineering of a synthetic electron conduit in living cells
Q33554618	Engineering of a synthetic quadrastable gene network to approach Waddington landscape and cell fate determination.
Q36967848	Engineering of regulated stochastic cell fate determination
Q38876131	Engineering of synthetic gene circuits for (re-)balancing physiological processes in chronic diseases
Q38067993	Engineering of synthetic intercellular communication systems
Q37328414	Engineering prokaryotic gene circuits
Q57804750	Engineering protein-protein devices for multilayered regulation of mRNA translation using orthogonal proteases in mammalian cells
Q92513208	Engineering repressors with coevolutionary cues facilitates toggle switches with a master reset
Q42092679	Engineering scalable biological systems
Q29615326	Engineering stability in gene networks by autoregulation
Q43194801	Engineering stochasticity in gene expression
Q38205343	Engineering synergy in biotechnology
Q37181492	Engineering transcription factors with novel DNA-binding specificity using comparative genomics
Q28606753	Enhancement of 3-hydroxypropionic acid production from glycerol by using a metabolic toggle switch
Q34418258	Enhancement of cellular memory by reducing stochastic transitions
Q58915434	Entrained Collective Rhythms of Multicellular Systems: Partial Impulsive Control Strategy
Q51788965	Entraining synthetic genetic oscillators.
Q27332166	Entrainment of a population of synthetic genetic oscillators
Q43129547	Environmentally-modulated changes in fluorescence distribution in cells with oscillatory genetic network dynamics
Q28551936	Enzyme Sequestration as a Tuning Point in Controlling Response Dynamics of Signalling Networks
Q54978867	Enzyme sequestration by the substrate: An analysis in the deterministic and stochastic domains.
Q46489955	Enzyme-free nucleic acid dynamical systems.
Q73303420	Epigenes: design and construction of new hereditary units
Q27348976	Epigenetic and conventional regulation is distributed among activators of FLO11 allowing tuning of population-level heterogeneity in its expression
Q34712052	Epigenetic chromatin silencing: bistability and front propagation
Q41023328	Epigenetics knocks on synthetic biology's door.
Q93382220	Escherichia coli "Marionette" strains with 12 highly optimized small-molecule sensors
Q83161962	Essential information for synthetic DNA sequences
Q21563494	Estimating the stochastic bifurcation structure of cellular networks
Q33327043	Estimation of the source-by-source effect of autorepression on genetic noise
Q33895303	Eugene--a domain specific language for specifying and constraining synthetic biological parts, devices, and systems
Q33590931	Eukaryotic systems broaden the scope of synthetic biology
Q51904098	Evaluation of the multiplane method for efficient simulations of reaction networks.
Q51861603	Evolution of complex dynamics.
Q35107362	Evolution of complexity in signaling pathways
Q50281938	Evolution of extrema features reveals optimal stimuli for biological state transitions.
Q46774328	Evolution of gene network activity by tuning the strength of negative-feedback regulation
Q42574966	Evolution of opinions on social networks in the presence of competing committed groups
Q35673851	Evolutionary constraints on visual cortex architecture from the dynamics of hallucinations
Q41811505	Evolutionary design of non-frustrated networks of phase-repulsive oscillators
Q58030943	Evolutionary mechanisms of circadian clocks
Q33304212	Evolutionary models for formation of network motifs and modularity in the Saccharomyces transcription factor network
Q28535196	Evolutionary tradeoffs between economy and effectiveness in biological homeostasis systems
Q43148797	Evolvability and hierarchy in rewired bacterial gene networks
Q51609873	Evolving complex dynamics in electronic models of genetic networks.
Q35548103	Evolving robust gene regulatory networks
Q30581754	Exocytosis of serotonin from the neuronal soma is sustained by a serotonin and calcium-dependent feedback loop
Q37081637	Expanding metabolism for biosynthesis of nonnatural alcohols
Q36119863	Experimental Design for Stochastic Models of Nonlinear Signaling Pathways Using an Interval-Wise Linear Noise Approximation and State Estimation
Q33306135	Experimental design for efficient identification of gene regulatory networks using sparse Bayesian models
Q38899793	Experimental verification of a conserved intronic microRNA located in the human TrkC gene with a cell type-dependent apoptotic function.
Q35692901	Exploring Host-Microbiome Interactions using an in Silico Model of Biomimetic Robots and Engineered Living Cells
Q35906061	Expression optimization and synthetic gene networks in cell-free systems.
Q33895020	External control of the GAL network in S. cerevisiae: a view from control theory
Q37039455	Extinction and resurrection in gene networks
Q42661785	FGF/MAPK signaling sets the switching threshold of a bistable circuit controlling cell fate decisions in embryonic stem cells
Q40086009	Fate-Regulating Circuits in Viruses: From Discovery to New Therapy Targets
Q55922764	Feedback for physicists: A tutorial essay on control
Q27021741	Feedback loops and reciprocal regulation: recurring motifs in the systems biology of the cell cycle
Q35208715	Fez function is required to maintain the size of the animal plate in the sea urchin embryo
Q42709833	Field Hypothesis on the Self-regulation of Gene Expression
Q34395078	Fine-tuning gene networks using simple sequence repeats.
Q31122657	Finite state projection based bounds to compare chemical master equation models using single-cell data
Q51957027	First passage and cooperativity of queuing kinetics.
Q43187919	Five hard truths for synthetic biology
Q51701794	Fluctuations in gene regulatory networks as Gaussian colored noise.
Q51634875	Fluctuations-induced switch in the gene transcriptional regulatory system.
Q37305086	Formal modeling and analysis of the hexosamine biosynthetic pathway: role of O-linked N-acetylglucosamine transferase in oncogenesis and cancer progression
Q96817183	Formation and functionalization of membraneless compartments in Escherichia coli
Q30482962	Foundations for engineering biology
Q38182184	Foundations for modeling the dynamics of gene regulatory networks: a multilevel-perspective review
Q34273084	Foundations for the design and implementation of synthetic genetic circuits
Q33716718	Frequency domain analysis of noise in autoregulated gene circuits.
Q36527652	Frequency domain analysis of noise in simple gene circuits.
Q50548913	Frequency modulation of stochastic gene expression bursts by strongly interacting small RNAs.
Q35659587	From Boolean Network Model to Continuous Model Helps in Design of Functional Circuits
Q36682037	From Cellular Attractor Selection to Adaptive Signal Control for Traffic Networks
Q24650577	From DNA nanotechnology to synthetic biology
Q98466542	From Microbial Communities to Distributed Computing Systems
Q36615907	From in vivo to in silico biology and back
Q74313658	From molecular biology to nanotechnology and nanomedicine
Q38692135	From noise to synthetic nucleoli: can synthetic biology achieve new insights?
Q38034935	Frontiers of optofluidics in synthetic biology.
Q37171591	Functional characteristics of a double negative feedback loop mediated by microRNAs
Q35217099	Functional characterization of bacterial sRNAs using a network biology approach
Q37670151	Functional motifs in biochemical reaction networks.
Q29616625	Functional roles for noise in genetic circuits
Q36207933	Functional roles of slow enzyme conformational changes in network dynamics.
Q33896779	GA-based Design Algorithms for the Robust Synthetic Genetic Oscillators with Prescribed Amplitude, Period and Phase
Q40500403	Gas-inducible transgene expression in mammalian cells and mice
Q42921721	Gene dosage balance in cellular pathways: implications for dominance and gene duplicability
Q38686945	Gene expression variability in clonal populations: Causes and consequences
Q42787778	Gene networks and liar paradoxes
Q27318486	Gene networks of fully connected triads with complete auto-activation enable multistability and stepwise stochastic transitions
Q47610427	Gene regulatory network growth by duplication
Q46972144	Gene regulatory networks: a coarse-grained, equation-free approach to multiscale computation
Q24658502	Gene switching rate determines response to extrinsic perturbations in the self-activation transcriptional network motif
Q37263722	Gene-gene cooperativity in small networks
Q36335163	Genetic Circuits in Salmonella typhimurium
Q50238363	Genetic Toggle Switch in the Absence of Cooperative Binding: Exact Results.
Q34520533	Genetic circuit design automation
Q64068600	Genetic circuits to engineer tissues with alternative functions
Q37189975	Genetic design automation: engineering fantasy or scientific renewal?
Q33382294	Genetic noise control via protein oligomerization
Q47352291	Genetic programs can be compressed and autonomously decompressed in live cells.
Q47163085	Genetic toggle switch controlled by bacterial growth rate
Q55345251	Genetic tool development and systemic regulation in biosynthetic technology.
Q54334788	Genetically switched D-lactate production in Escherichia coli.
Q33532340	GenoCAD for iGEM: a grammatical approach to the design of standard-compliant constructs
Q42278257	Genome Engineering of Stem Cells for Autonomously Regulated, Closed-Loop Delivery of Biologic Drugs
Q92889687	Genome-scale transcriptional dynamics and environmental biosensing
Q37330215	Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture
Q34194331	Genomic mining of prokaryotic repressors for orthogonal logic gates
Q36409912	GillesPy: A Python Package for Stochastic Model Building and Simulation
Q33296323	Global analysis of host response to induction of a latent bacteriophage
Q48159904	Global convergence of quorum-sensing networks
Q33651556	Global parameter estimation methods for stochastic biochemical systems
Q33723464	Global robust power-rate stability of delayed genetic regulatory networks with noise perturbations
Q33878009	Grand Challenges in Synthetic Biology to be Accomplished
Q42062295	Growth rate-dependent global effects on gene expression in bacteria
Q37691431	HIC1 and miR-23~27~24 clusters form a double-negative feedback loop in breast cancer
Q41992077	Half-life measurements of chemical inducers for recombinant gene expression
Q35130336	Hardware (DNA) circuits
Q33747160	Harnessing nature's toolbox: regulatory elements for synthetic biology
Q27321679	Heritable change caused by transient transcription errors
Q51887731	Hierarchical analysis of piecewise affine models of gene regulatory networks.
Q33996801	Hierarchical differentiation of myeloid progenitors is encoded in the transcription factor network
Q64107147	High-Performance Biocomputing in Synthetic Biology-Integrated Transcriptional and Metabolic Circuits
Q29036647	High-Yield, Zero-Leakage Expression System with a Translational Switch Using Site-Specific Unnatural Amino Acid Incorporation
Q91917183	High-order interactions distort the functional landscape of microbial consortia
Q28477385	High-precision, in vitro validation of the sequestration mechanism for generating ultrasensitive dose-response curves in regulatory networks
Q39576497	High-resolution mapping of bifurcations in nonlinear biochemical circuits.
Q34340886	Highly modular bow-tie gene circuits with programmable dynamic behaviour
Q30974536	How to turn a genetic circuit into a synthetic tunable oscillator, or a bistable switch
Q74440565	How to turn living cells into computers
Q34970086	Hybrid T-helper cells: stabilizing the moderate center in a polarized system
Q28828779	Hypothetical biomolecular probe based on a genetic switch with tunable symmetry and stability
Q40319558	Hysteresis and cell cycle transitions: how crucial is it?
Q35214046	Hysteresis can grant fitness in stochastically varying environment
Q33892242	Hysteresis in a synthetic mammalian gene network
Q35770823	Hysteresis vs. graded responses: the connections make all the difference
Q43191527	Hysteretic and graded responses in bacterial two-component signal transduction
Q46841056	Identifiability and inference of pathway motifs by epistasis analysis
Q34110410	Identification of important nodes in directed biological networks: a network motif approach
Q34067222	Identification of novel targets for breast cancer by exploring gene switches on a genome scale
Q34101667	Identification of optimal drug combinations targeting cellular networks: integrating phospho-proteomics and computational network analysis
Q33266433	Identification of the proliferation/differentiation switch in the cellular network of multicellular organisms
Q93009232	Identifying critical state of complex diseases by single-sample Kullback-Leibler divergence
Q95328049	Identifying inhibitors of epithelial-mesenchymal plasticity using a network topology-based approach
Q42369473	Identifying parameter regions for multistationarity
Q52570105	Identifying robust hysteresis in networks.
Q51129704	Impact of RNA interference on gene networks.
Q50534237	Impact of time delays on oscillatory dynamics of interlinked positive and negative feedback loops.
Q35909908	Implementation of Complex Biological Logic Circuits Using Spatially Distributed Multicellular Consortia
Q36396573	Implementation of a genetic logic circuit: bio-register
Q48668624	Implementing an OR-NOT (ORN) logic gate with components of the SOS regulatory network of Escherichia coli.
Q28472646	Implementing arithmetic and other analytic operations by transcriptional regulation
Q36420995	Implications of rewiring bacterial quorum sensing
Q26799987	Implications of the Hybrid Epithelial/Mesenchymal Phenotype in Metastasis
Q40830283	Importance of input perturbations and stochastic gene expression in the reverse engineering of genetic regulatory networks: insights from an identifiability analysis of an in silico network
Q92283882	Improvement of the memory function of a mutual repression network in a stochastic environment by negative autoregulation
Q37660070	Incorporation of unnatural amino acids for synthetic biology
Q37847611	Increasing the dynamic control space of mammalian transcription devices by combinatorial assembly of homologous regulatory elements from different bacterial species
Q35172171	Inducible suppression of global translation by overuse of rare codons
Q44597467	Information recovery in molecular biology: causal modelling of regulated promoter switching experiments.
Q52687617	Information transmission in microbial and fungal communication: from classical to quantum.
Q47777229	Information-based measures for logical stochastic resonance in a synthetic gene network under Lévy flight superdiffusion
Q29307507	Informing Biological Design by Integration of Systems and Synthetic Biology
Q50528595	Inhibition of gene expression in Escherichia coli under hypergravity.
Q33860800	Inhibitors Alter the Stochasticity of Regulatory Proteins to Force Cells to Switch to the Other State in the Bistable System.
Q31034422	Inner Workings: DNA for data storage and computing
Q40971962	Insulated transcriptional elements enable precise design of genetic circuits.
Q36247937	Integrated analysis of tumor samples sheds light on tumor heterogeneity
Q35966355	Integrated analysis reveals that STAT3 is central to the crosstalk between HER/ErbB receptor signaling pathways in human mammary epithelial cells
Q26830304	Integrating biological redesign: where synthetic biology came from and where it needs to go
Q51543749	Integrating cell-level kinetic modeling into the design of engineered protein therapeutics.
Q95318850	Integrative Circuit-Host Modeling of a Genetic Switch in Varying Environments
Q30496545	Integrative multicellular biological modeling: a case study of 3D epidermal development using GPU algorithms
Q37361255	Intelligent medical diagnostics via molecular logic
Q34461517	Interlinked fast and slow positive feedback loops drive reliable cell decisions
Q50905118	Interlinked mutual inhibitory positive feedbacks induce robust cellular memory effects.
Q51004530	Intermediate Filaments Supporting Cell Shape and Growth in Bacteria.
Q41895297	Interplay of microRNA and epigenetic regulation in the human regulatory network
Q101165910	Interpretation of morphogen gradients by a synthetic bistable circuit
Q36329954	Interrogating the topological robustness of gene regulatory circuits by randomization.
Q36124322	Intracellular signaling: spatial and temporal control
Q24630461	Intrinsic noise in gene regulatory networks
Q34498475	Introduction of customized inserts for s-treamlined assembly and optimization of BioBrick synthetic genetic circuits.
Q44717284	Introduction to focus issue: quantitative approaches to genetic networks
Q41899660	Inverse bifurcation analysis: application to simple gene systems
Q41369640	Iterative plug-and-play methodology for constructing and modifying synthetic gene networks
Q52585319	Kinetic models of hematopoietic differentiation.
Q40681530	Kinetics of the cellular intake of a gene expression inducer at high concentrations
Q28474801	Large-scale analysis of network bistability for human cancers
Q41686631	Large-scale design of robust genetic circuits with multiple inputs and outputs for mammalian cells
Q35664673	Layering genetic circuits to build a single cell, bacterial half adder
Q99402094	Limit cycles in models of circular gene networks regulated by negative feedback loops
Q33681660	Limitations of quantitative gene regulation models: a case study.
Q58770977	Linear mapping approximation of gene regulatory networks with stochastic dynamics
Q35228707	Linear population allocation by bistable switches in response to transient stimulation
Q35165190	Linear superposition and prediction of bacterial promoter activity dynamics in complex conditions
Q21563740	Linking fast and slow positive feedback loops creates an optimal bistable switch in cell signaling
Q37425287	Listening to the noise: random fluctuations reveal gene network parameters.
Q28541592	Loads bias genetic and signaling switches in synthetic and natural systems
Q42373949	Logic Synthesis of Recombinase-Based Genetic Circuits.
Q33812404	Logic integration of mRNA signals by an RNAi-based molecular computer
Q90704156	Long-range temporal coordination of gene expression in synthetic microbial consortia
Q34042604	LsrR quorum sensing "switch" is revealed by a bottom-up approach
Q51063630	MAPK-mediated bimodal gene expression and adaptive gradient sensing in yeast.
Q41978496	MODELING OF GENE REGULATORY PROCESSES BY POPULATION MEDIATED SIGNALING. NEW APPLICATIONS OF POPULATION BALANCES
Q97643279	Majority sensing in synthetic microbial consortia
Q33899356	Making cellular memories
Q36342438	Making gene circuits sing
Q88513495	Making lineage decisions with biological noise: Lessons from the early mouse embryo
Q38390803	Mammalian synthetic biology: emerging medical applications.
Q38847010	Mammalian synthetic circuits with RNA binding proteins for RNA-only delivery.
Q64243889	Mapping DNA sequence to transcription factor binding energy in vivo
Q36128011	Mapping the Emergence of Synthetic Biology
Q27331437	Mapping the environmental fitness landscape of a synthetic gene circuit
Q28817353	Markov State Models of gene regulatory networks
Q36481458	Mathematical analysis and quantification of fluorescent proteins as transcriptional reporters.
Q52069458	Mathematical biology. Life is a game of numbers.
Q89013799	Mathematical model of a serine integrase-controlled toggle switch with a single input
Q37403978	Mathematical modeling and synthetic biology.
Q38423902	Mathematical modeling in neuroendocrinology
Q33840296	Mathematical modeling of GATA-switching for regulating the differentiation of hematopoietic stem cell.
Q33969404	Mathematical modeling of gene networks
Q38851598	Mathematical modeling reveals a critical role for cyclin D1 dynamics in phenotype switching during glioma differentiation
Q37768672	Mathematical modeling: bridging the gap between concept and realization in synthetic biology
Q51582440	Mathematical modelling of stem cell differentiation: the PU.1-GATA-1 interaction.
Q34776635	Mathematical models in biology: from molecules to life
Q50737128	Mathematical models of morphogen gradients and their effects on gene expression.
Q38332781	Mechanism of transcriptional repression at a bacterial promoter by analysis of single molecules
Q36824562	Mechanistically consistent reduced models of synthetic gene networks.
Q38769967	Mechanosensing of shear by Pseudomonas aeruginosa leads to increased levels of the cyclic-di-GMP signal initiating biofilm development
Q42905903	Meeting report: synthetic biology Jamboree for undergraduates
Q90414193	Membrane Modulation of Super-Secreting "midiBacillus" Expressing the Major Staphylococcus aureus Antigen - A Mass-Spectrometry-Based Absolute Quantification Approach
Q33322890	Memory in microbes: quantifying history-dependent behavior in a bacterium
Q54294212	Metabolic flux redirection from a central metabolic pathway toward a synthetic pathway using a metabolic toggle switch.
Q34282268	Methods and applications for assembling large DNA constructs
Q37331613	MiRNAs confer phenotypic robustness to gene networks by suppressing biological noise.
Q24598602	MicroRNA-based regulation of epithelial-hybrid-mesenchymal fate determination
Q57062283	Microbial population dynamics and evolution: a statistical physicist's guide
Q38829360	Microbiome therapeutics - Advances and challenges
Q90006144	Microfluidic cap-to-dispense (μCD): a universal microfluidic-robotic interface for automated pipette-free high-precision liquid handling
Q34098336	Microfluidic devices for measuring gene network dynamics in single cells
Q91741441	Microfluidics for Artificial Life: Techniques for Bottom-Up Synthetic Biology
Q42877353	Minimal genetic device with multiple tunable functions
Q34105707	Model transcriptional networks with continuously varying expression levels
Q37255911	Model-driven optimization of multicomponent self-assembly processes
Q36235112	Model-guided combinatorial optimization of complex synthetic gene networks.
Q36973028	Model-guided design of ligand-regulated RNAi for programmable control of gene expression
Q41281433	Modeling and simulation of biological systems using SPICE language
Q34122241	Modeling bistable cell-fate choices in the Drosophila eye: qualitative and quantitative perspectives
Q33690994	Modeling delay in genetic networks: from delay birth-death processes to delay stochastic differential equations.
Q26801236	Modeling for (physical) biologists: an introduction to the rule-based approach
Q58698875	Modeling of mesenchymal hybrid epithelial state and phenotypic transitions in EMT and MET processes of cancer cells
Q38056561	Modeling regulatory networks to understand plant development: small is beautiful.
Q41959735	Modeling stochastic dynamics in biochemical systems with feedback using maximum caliber
Q51914170	Modeling stochastic gene expression under repression.
Q38336312	Modeling stochastic noise in gene regulatory systems
Q21145352	Modeling structure-function relationships in synthetic DNA sequences using attribute grammars
Q33934640	Modelling cellular behaviour
Q30534748	Modelling emergence of oscillations in communicating bacteria: a structured approach from one to many cells
Q36069239	Modelling gene networks at different organisational levels
Q28767107	Modelling in molecular biology: describing transcription regulatory networks at different scales
Q21202797	Models for synthetic biology
Q35926371	Modular Synthetic Inverters from Zinc Finger Proteins and Small RNAs
Q36482527	Modular approaches to expanding the functions of living matter
Q35120083	Modular composition of gene transcription networks
Q35096976	Modular construction of mammalian gene circuits using TALE transcriptional repressors.
Q36280671	Modular control of multiple pathways using engineered orthogonal T7 polymerases
Q28481407	Modular design of artificial tissue homeostasis: robust control through synthetic cellular heterogeneity
Q41784461	Modular electron transfer circuits for synthetic biology: insulation of an engineered biohydrogen pathway
Q85375641	Modular gene-circuit design takes two steps forward
Q34258562	Molecular characterization of duck enteritis virus CHv strain UL49.5 protein and its colocalization with glycoprotein M
Q30484516	Molecular circuits for associative learning in single-celled organisms
Q50528466	Molecular computing with plant cell phenotype serving as quality controlled output.
Q38259273	Molecular crowding shapes gene expression in synthetic cellular nanosystems
Q37371719	Molecular flip-flops formed by overlapping Fis sites.
Q39941055	Molecular implementation of simple logic programs
Q48119442	Molecular level dynamics of genetic oscillator--the effect of protein-protein interaction
Q37197570	Molecular recordings by directed CRISPR spacer acquisition
Q33436717	Monomeric bistability and the role of autoloops in gene regulation
Q42087577	Monotone and near-monotone biochemical networks
Q42716577	Monotone bifurcation graphs
Q35226041	Morphisms of reaction networks that couple structure to function
Q37640975	Morphogenesis at criticality
Q33272715	Motif programming: a microgene-based method for creating synthetic proteins containing multiple functional motifs
Q35408902	Motifs emerge from function in model gene regulatory networks
Q35121904	Motifs, modules and games in bacteria
Q35623314	Multi-input distributed classifiers for synthetic genetic circuits
Q64234963	Multi-modality in gene regulatory networks with slow promoter kinetics
Q64057671	Multi-rhythmicity generated by coupling two cellular rhythms
Q51579443	Multi-scale genetic dynamic modelling I : an algorithm to compute generators.
Q38410699	Multi-scale genetic dynamic modelling II: application to synthetic biology: an algorithmic Markov chain based approach
Q37894287	Multi-scale modeling in biology: how to bridge the gaps between scales?
Q38802489	Multi-stability and the origin of microbial community types
Q43169274	Multi-stable dynamics of the non-adiabatic repressilator
Q27315853	Multicellular computing using conjugation for wiring
Q35271606	Multicriteria global optimization for biocircuit design
Q51150465	Multimodality and flexibility of stochastic gene expression.
Q35058171	Multiple sequence-specific factors generate the nucleosome-depleted region on CLN2 promoter.
Q51887476	Multiscale analysis of reaction networks.
Q57811248	Multiscale effects of heating and cooling on genes and gene networks
Q44770275	Multistability in the lactose utilization network of Escherichia coli
Q46319267	Multistability of synthetic genetic networks with repressive cell-to-cell communication
Q96127357	Multistable and dynamic CRISPRi-based synthetic circuits
Q25256691	Multistable and multistep dynamics in neutrophil differentiation
Q33388197	Multistable decision switches for flexible control of epigenetic differentiation
Q21284297	Multistable switches and their role in cellular differentiation networks
Q46080347	NOT Gate Genetic Circuits to Control Gene Expression in Cyanobacteria
Q37098224	Napoleon Is in Equilibrium
Q24610764	Nature, nurture, or chance: stochastic gene expression and its consequences
Q24537594	Near-critical phenomena in intracellular metabolite pools
Q56698274	Necessary conditions for multistationarity in discrete dynamical systems
Q88651426	Negative Regulation Gene Circuits for Efflux Pump Control
Q37125162	Negative autoregulation linearizes the dose-response and suppresses the heterogeneity of gene expression
Q33962256	Negative autoregulation speeds the response times of transcription networks
Q90201856	Network Topologies That Can Achieve Dual Function of Adaptation and Noise Attenuation
Q37452948	Network dynamics
Q34457189	Network dynamics and cell physiology
Q33533378	Network inference and network response identification: moving genome-scale data to the next level of biological discovery
Q29615325	Network motifs: theory and experimental approaches
Q38112371	Network nonlinearities in drug treatment
Q37519797	Network of mutually repressive metastasis regulators can promote cell heterogeneity and metastatic transitions
Q50986545	Networks of coupled circuits: from a versatile toggle switch to collective coherent behavior.
Q73887486	Neutralizing noise in gene networks
Q39919274	Next-generation synthetic gene networks
Q30708248	Noise Reduction in Complex Biological Switches.
Q89574815	Noise control for molecular computing
Q28659275	Noise in biology
Q30557299	Noise in gene expression determines cell fate in Bacillus subtilis
Q34528937	Noise in protein expression scales with natural protein abundance
Q24672369	Noise in transcription negative feedback loops: simulation and experimental analysis
Q37338858	Noise reduction facilitated by dosage compensation in gene networks
Q51607759	Noise-aided computation within a synthetic gene network through morphable and robust logic gates.
Q35016879	Noise-aided logic in an electronic analog of synthetic genetic networks
Q35047931	Noise-based switches and amplifiers for gene expression
Q46904631	Noise-induced regime shifts: A quantitative characterization.
Q33305706	Noise-induced switches in network systems of the genetic toggle switch
Q37128860	Non-transcriptional regulatory processes shape transcriptional network dynamics
Q46443633	Nonlinear Kinetic Behavior in Constitutional Dynamic Reaction Networks
Q33892231	Nonlinear protein degradation and the function of genetic circuits
Q33291673	Nonlinear regulation enhances the phenotypic expression of trans-acting genetic polymorphisms
Q34520921	Nonlinear signalling networks and cell-to-cell variability transform external signals into broadly distributed or bimodal responses
Q100438580	Novel Tunable Spatio-Temporal Patterns From a Simple Genetic Oscillator Circuit
Q42291805	Nucleoid and cytoplasmic localization of small RNAs in Escherichia coli.
Q28822213	Numerical algebraic geometry for model selection and its application to the life sciences
Q73575704	On episode sensitization in recurrent affective disorders: the role of noise
Q57661646	On genetic logic circuits: forcing digital electronics standards?
Q33711386	On schemes of combinatorial transcription logic
Q33233059	On the attenuation and amplification of molecular noise in genetic regulatory networks
Q51900330	On the number of steady states in a multiple futile cycle.
Q47694765	On the role of topology in regulating transcriptional cascades
Q30463780	On-chip cellomics assay enabling algebraic and geometric understanding of epigenetic information in cellular networks of living systems. 1. Temporal aspects of epigenetic information in bacteria
Q36739284	Operator sequence alters gene expression independently of transcription factor occupancy in bacteria
Q33322237	OptCircuit: an optimization based method for computational design of genetic circuits
Q56568085	Optically Controlled Oscillators in an Engineered Bioelectric Tissue
Q34270962	Optimal homeostasis necessitates bistable control
Q51978639	Optimal path to epigenetic switching.
Q28469330	Optimal signal processing in small stochastic biochemical networks
Q51942433	Optimal transition paths of stochastic chemical kinetic systems.
Q35095781	Optimization of a stochastically simulated gene network model via simulated annealing.
Q39004632	Optimization of industrial microorganisms: recent advances in synthetic dynamic regulators.
Q48268108	Optimization-based synthesis of stochastic biocircuits with statistical specifications.
Q47161059	Optimizing DNA assembly based on statistical language modelling
Q40298597	Optimizing genetic circuits by global sensitivity analysis
Q53975052	Optimizing information flow in small genetic networks. III. A self-interacting gene.
Q38983934	Optogenetic characterization methods overcome key challenges in synthetic and systems biology
Q38239866	Orchestration of plasma cell differentiation by Bach2 and its gene regulatory network
Q33883302	Origin of bistability underlying mammalian cell cycle entry
Q34567666	Paper-based synthetic gene networks
Q46333120	Parallel logic gates in synthetic gene networks induced by non-Gaussian noise
Q47572001	Parallel replica dynamics method for bistable stochastic reaction networks: Simulation and sensitivity analysis
Q30918589	Parameter estimation methods for gene circuit modeling from time-series mRNA data: a comparative study
Q39897505	Parameter identification using stochastic simulations reveals a robustness in CD95 apoptotic response
Q42999572	Parameter mismatches and oscillation death in coupled oscillators
Q91361801	Pathways to cellular supremacy in biocomputing
Q54320003	Pattern formation in individual-based systems with time-varying parameters.
Q41879890	Perfect sampling of the master equation for gene regulatory networks
Q42292651	Period doubling induced by thermal noise amplification in genetic circuits
Q34576936	Permanent genetic memory with >1-byte capacity
Q91869804	Perspective: The promise of multi-cellular engineered living systems
Q26752520	Phenotypic Variability in Synthetic Biology Applications: Dealing with Noise in Microbial Gene Expression
Q28709545	Phenotypic models of evolution and development: geometry as destiny
Q35989384	Phenotypic states become increasingly sensitive to perturbations near a bifurcation in a synthetic gene network
Q33627376	Phenotypic switching in gene regulatory networks
Q34502643	Phenotypic variation in bacteria: the role of feedback regulation
Q51454060	Phosphatases modulate the bistable sporulation gene expression pattern in Bacillus subtilis.
Q35378297	Phosphate sink containing two-component signaling systems as tunable threshold devices
Q43165431	Photoregulation of DNA transcription by using photoresponsive T7 promoters and clarification of its mechanism
Q58045973	Physical approaches to the dynamics of genetic circuits: a tutorial
Q34576205	Physicochemical modelling of cell signalling pathways.
Q43057419	Piecewise linear and Boolean models of chemical reaction networks
Q53419017	Plant Science. Plant synthetic biology takes root.
Q47833507	Plasmid-borne prokaryotic gene expression: sources of variability and quantitative system characterization
Q33239285	Plasticity of the cis-regulatory input function of a gene
Q92578991	Polar-opposite fates
Q33570920	Polarization and migration in the zebrafish posterior lateral line system
Q36793610	Positive feedback in cellular control systems.
Q24535235	Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion
Q36544660	Positive feedback produces broad distributions in maximum activation attained within a narrow time window in stochastic biochemical reactions
Q40896161	Positive receptor feedback during lineage commitment can generate ultrasensitivity to ligand and confer robustness to a bistable switch
Q42128441	Positive-feedback loops as a flexible biological module
Q51601491	Post-transcriptional Boolean computation by combining aptazymes controlling mRNA translation initiation and tRNA activation.
Q33280627	Potential energy landscape and robustness of a gene regulatory network: toggle switch
Q45743869	Potential landscape of high dimensional nonlinear stochastic dynamics with large noise
Q28533397	Potential role of a bistable histidine kinase switch in the asymmetric division cycle of Caulobacter crescentus
Q98565963	Precision design of stable genetic circuits carried in highly-insulated E. coli genomic landing pads
Q36627240	Precision metabolic engineering: The design of responsive, selective, and controllable metabolic systems
Q35146614	Prediction and measurement of an autoregulatory genetic module
Q96022845	Predictive biology: modelling, understanding and harnessing microbial complexity
Q21131128	Preparing synthetic biology for the world
Q36689586	Principles of cell-free genetic circuit assembly
Q34502550	Principles of genetic circuit design
Q93222054	Probabilistic control of HIV latency and transactivation by the Tat gene circuit
Q33536831	Probability distributed time delays: integrating spatial effects into temporal models
Q41239727	Process-based design of dynamical biological systems
Q28236112	Programmable bacteria detect and record an environmental signal in the mammalian gut
Q91595611	Programmable bacteria induce durable tumor regression and systemic antitumor immunity
Q34322635	Programmable cells: interfacing natural and engineered gene networks
Q36701147	Programmable control of bacterial gene expression with the combined CRISPR and antisense RNA system.
Q28476817	Programmable ligand detection system in plants through a synthetic signal transduction pathway
Q35879638	Programmable probiotics for detection of cancer in urine.
Q59909679	Programmable protein circuits in living cells
Q51693435	Programmed population control by cell-cell communication and regulated killing.
Q36536989	Programming and engineering biological networks
Q50034999	Programming gene and engineered-cell therapies with synthetic biology.
Q34087556	Programming languages for synthetic biology
Q36969039	Programming microbial population dynamics by engineered cell-cell communication
Q34358693	Promoter strength driving TetR determines the regulatory properties of Tet-controlled expression systems
Q90683378	Protein assembly systems in natural and synthetic biology
Q90929333	Protein circuits reprogram cells
Q37651395	Protocols for implementing an Escherichia coli based TX-TL cell-free expression system for synthetic biology
Q36209832	Pulse Detecting Genetic Circuit - A New Design Approach
Q48205353	Quantifying cellular capacity identifies gene expression designs with reduced burden
Q34347484	Quantifying evolvability in small biological networks
Q33732108	Quantifying uncertainty, variability and likelihood for ordinary differential equation models
Q34205663	Quantitative analysis of cellular metabolic dissipative, self-organized structures
Q28083248	Quantitative and logic modelling of molecular and gene networks
Q91835374	Quantitative and synthetic biology approaches to combat bacterial pathogens
Q50773215	Quantitative characterization of genetic parts and circuits for plant synthetic biology.
Q35354735	Quantitative dynamic modelling of the gene regulatory network controlling adipogenesis
Q37080844	Queueing up for enzymatic processing: correlated signaling through coupled degradation
Q90707198	Quorum sensing for population-level control of bacteria and potential therapeutic applications
Q40822695	Quorum-Sensing Synchronization of Synthetic Toggle Switches: A Design Based on Monotone Dynamical Systems Theory
Q34747424	Quorum-sensing crosstalk-driven synthetic circuits: from unimodality to trimodality.
Q38301085	RNA aptamers as genetic control devices: the potential of riboswitches as synthetic elements for regulating gene expression
Q36470934	RNA synthetic biology
Q34081665	Rapid and tunable post-translational coupling of genetic circuits
Q91787916	Rapid loss of a green fluorescent plasmid in Escherichia coli O157:H7
Q35804156	Rapidly characterizing the fast dynamics of RNA genetic circuitry with cell-free transcription-translation (TX-TL) systems
Q41630217	Rate-limiting steps in transcription dictate sensitivity to variability in cellular components
Q38668511	Rational design of a bacterial transcriptional cascade for amplifying gene expression capacity
Q41833855	Rational design of a fusion partner for membrane protein expression in E. coli
Q28249187	Rational design of memory in eukaryotic cells
Q41444663	Rational design of modular circuits for gene transcription: A test of the bottom-up approach
Q52638161	Rational engineering of synthetic microbial systems: from single cells to consortia.
Q99594700	Rational programming of history-dependent logic in cellular populations
Q34108156	Rationally designed logic integration of regulatory signals in mammalian cells
Q43111559	Reaction coordinates for the flipping of genetic switches
Q46091653	Realizing the potential of synthetic biology
Q36895178	Recent Progress on Systems and Synthetic Biology Approaches to Engineer Fungi As Microbial Cell Factories.
Q26781904	Recent advances and opportunities in synthetic logic gates engineering in living cells
Q97066772	Recent advances in natural products exploitation in Streptomyces via synthetic biology
Q38700387	Reciprocal regulation of ARPP-16 by PKA and MAST3 kinases provides a cAMP-regulated switch in protein phosphatase 2A inhibition
Q90699072	Reconciling periodic rhythms of large-scale biological networks by optimal control
Q30971329	Reconstructing gene regulatory dynamics from high-dimensional single-cell snapshot data
Q53035308	Reconstructing the single-cell-level behavior of a toggle switch from population-level measurements.
Q34470075	Reconstruction of genetic circuits
Q38757688	Redesigning metabolism based on orthogonality principles
Q28485150	Redirector: designing cell factories by reconstructing the metabolic objective
Q36279891	Regulating synthetic gene networks in 3D materials
Q37348683	Regulation by transcription factors in bacteria: beyond description
Q33901103	Regulation of endogenous human gene expression by ligand-inducible TALE transcription factors.
Q34739540	Regulation of glioblastoma cell invasion by PKC iota and RhoB.
Q29616626	Regulation of noise in the expression of a single gene
Q38172811	Regulatory RNAs: charming gene management styles for synthetic biology applications
Q37495403	Regulatory circuit design and evolution using phage lambda.
Q41852792	Regulatory consequences of gene translocation in bacteria
Q55209742	Remote Control of Mammalian Cells with Heat-Triggered Gene Switches and Photothermal Pulse Trains.
Q37419607	Remote optical switch for localized and selective control of gene interference.
Q34778767	Resistance to diet-induced obesity in mice with synthetic glyoxylate shunt
Q33817686	Response acceleration in post-translationally regulated genetic circuits
Q52014853	Response delays and the structure of transcription networks.
Q48094104	Responses to auxin signals: an operating principle for dynamical sensitivity yet high resilience
Q36481173	Rethinking the Hierarchy of Sugar Utilization in Bacteria.
Q34028331	Reverse engineering gene networks using singular value decomposition and robust regression
Q35022482	Reverse engineering gene networks: Integrating genetic perturbations with dynamical modeling
Q37700679	Rewiring cells: synthetic biology as a tool to interrogate the organizational principles of living systems
Q34032017	Rewritable digital data storage in live cells via engineered control of recombination directionality
Q44817179	Ribozyme déjà vu.
Q34433193	Ribozyme-based insulator parts buffer synthetic circuits from genetic context
Q45956205	Roadmap on semiconductor-cell biointerfaces.
Q42103346	Robust and sensitive control of a quorum-sensing circuit by two interlocked feedback loops
Q35610464	Robust design of biological circuits: evolutionary systems biology approach
Q42126712	Robust dynamics in minimal hybrid models of genetic networks
Q21563483	Robust network topologies for generating switch-like cellular responses
Q36979323	Robust stability of genetic regulatory networks with distributed delay
Q34458342	Robust synchronization control scheme of a population of nonlinear stochastic synthetic genetic oscillators under intrinsic and extrinsic molecular noise via quorum sensing
Q37249135	Robust synthetic biology design: stochastic game theory approach
Q33995378	Robust synthetic gene network design via library-based search method
Q36160722	Robust, tunable genetic memory from protein sequestration combined with positive feedback
Q51961254	Robustness analysis of cellular memory in an autoactivating positive feedback system.
Q28469133	Robustness can evolve gradually in complex regulatory gene networks with varying topology
Q28476105	Robustness of circadian clocks to daylight fluctuations: hints from the picoeucaryote Ostreococcus tauri
Q42183156	Robustness of self-organizing chemoattractant field arising from precise pulse induction of its breakdown enzyme: a single-cell level analysis of PDE expression in Dictyostelium.
Q52765532	Robustness of synthetic oscillators in growing and dividing cells.
Q93132800	Rock-paper-scissors: Engineered population dynamics increase genetic stability
Q57382799	Role of Core Biological Motifs in Dose-Response Modeling: An Example with Switchlike Circuits
Q51804668	Role of cooperative binding on noise expression.
Q35955737	Roles for microRNAs in conferring robustness to biological processes
Q51040110	Roles of noise in single and coupled multiple genetic oscillators.
Q28482220	Roles of protein ubiquitination and degradation kinetics in biological oscillations
Q33901124	Rule-based design of synthetic transcription factors in eukaryotes.
Q34424966	Rules for biological regulation based on error minimization
Q36136105	SYNTHETIC BIOLOGY. Emergent genetic oscillations in a synthetic microbial consortium
Q94064383	Scaling Computation and Memory in Living Cells
Q59386082	Scaling up genetic circuit design for cellular computing: advances and prospects.
Q34224888	Self-organisation and orderly processes by individual protein complexes in the bacterial cell
Q29619706	Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistability
Q35888342	Self-regulation in a minimal model of chemical self-replication
Q38200876	Semi-synthetic artemisinin: a model for the use of synthetic biology in pharmaceutical development.
Q39728911	Semi-synthetic mammalian gene regulatory networks
Q40324429	Sensitivity analysis of discrete stochastic systems
Q37622910	Sequence tolerance of the phage lambda PRM promoter: implications for evolution of gene regulatory circuitry
Q36408706	Sequestration-based bistability enables tuning of the switching boundaries and design of a latch
Q39281466	Shaping development by stochasticity and dynamics in gene regulation
Q41863552	Shared control of gene expression in bacteria by transcription factors and global physiology of the cell.
Q40213625	Sharp developmental thresholds defined through bistability by antagonistic gradients of retinoic acid and FGF signaling
Q31121879	Sharpening of expression domains induced by transcription and microRNA regulation within a spatio-temporal model of mid-hindbrain boundary formation
Q58573197	Sigma factor-mediated tuning of bacterial cell-free synthetic genetic oscillators
Q42065933	Signal transduction network motifs and biological memory
Q35692350	Signal-to-Noise Ratio Measures Efficacy of Biological Computing Devices and Circuits
Q24676805	Signaling switches and bistability arising from multisite phosphorylation in protein kinase cascades
Q33414399	Simple molecular networks that respond optimally to time-periodic stimulation
Q40847240	Simplified mechanistic models of gene regulation for analysis and design.
Q87689786	Simulating Genetic Circuits in Bacterial Populations with Growth Heterogeneity
Q51955626	Simulating rare events in equilibrium or nonequilibrium stochastic systems.
Q58921899	Single Impulsive Controller for Exponential Synchronization of Stochastic Lur'e Networks with Impulsive Disturbance
Q43148003	Single cell resolution in regulation of gene expression
Q41773810	Single-cell behavior and population heterogeneity: solving an inverse problem to compute the intrinsic physiological state functions.
Q35931760	Single-cell zeroth-order protein degradation enhances the robustness of synthetic oscillator
Q51268251	Small-number effects: a third stable state in a genetic bistable toggle switch.
Q36954927	Small-scale copy number variation and large-scale changes in gene expression.
Q29619703	Sniffers, buzzers, toggles and blinkers: dynamics of regulatory and signaling pathways in the cell
Q30667434	Solution of the chemical master equation by radial basis functions approximation with interface tracking
Q33551049	Solving the chemical master equation using sliding windows
Q35875319	Sources of Variability in a Synthetic Gene Oscillator.
Q35410976	Space-induced bifurcation in repression-based transcriptional circuits
Q27335171	Spatial analysis of expression patterns predicts genetic interactions at the mid-hindbrain boundary
Q30579452	Spatiotemporal control of gene expression with pulse-generating networks.
Q36651612	Spatiotemporal dynamics of distributed synthetic genetic circuits
Q51052164	Specialization and bet hedging in heterogeneous populations.
Q33325607	Stability analysis of genetic regulatory network with additive noises.
Q35649571	Stability and multiattractor dynamics of a toggle switch based on a two-stage model of stochastic gene expression
Q59040782	Stability of Uncertain Impulsive Stochastic Genetic Regulatory Networks with Time-Varying Delay in the Leakage Term
Q51039245	Stability of bacterial toggle switches is enhanced by cell-cycle lengthening by several orders of magnitude.
Q28828703	State Space Truncation with Quantified Errors for Accurate Solutions to Discrete Chemical Master Equation
Q33707494	Statistical mechanical model of coupled transcription from multiple promoters due to transcription factor titration
Q34490588	Statistical method for revealing form-function relations in biological networks
Q38936609	Steady state statistical correlations predict bistability in reaction motifs.
Q37620369	Steady-State-Preserving Simulation of Genetic Regulatory Systems.
Q51401049	Steady-state parameter sensitivity in stochastic modeling via trajectory reweighting.
Q51217273	Steady-state simulation of metastable stochastic chemical systems.
Q36164508	Stem cell biology: a view toward the future
Q28554812	Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist
Q90244564	Stochastic activation and bistability in a Rab GTPase regulatory network
Q51552704	Stochastic analysis of a miRNA-protein toggle switch.
Q47570097	Stochastic analysis of bistability in coherent mixed feedback loops combining transcriptional and posttranscriptional regulations.
Q51430807	Stochastic binary modeling of cells in continuous time as an alternative to biochemical reaction equations.
Q43743698	Stochastic fluctuations in gene expression far from equilibrium: Omega expansion and linear noise approximation.
Q34805489	Stochastic gene expression as a many-body problem
Q73756864	Stochastic gene expression: density of defects frozen into permanent Turing patterns
Q36510612	Stochastic model reduction using a modified Hill-type kinetic rate law.
Q34694165	Stochastic models for regulatory networks of the genetic toggle switch
Q50949348	Stochastic phenotype transition of a single cell in an intermediate region of gene state switching.
Q34294676	Stochastic simulations of a synthetic bacteria-yeast ecosystem
Q51920181	Stochastic simulations of genetic switch systems.
Q51895644	Stochastic simulations of the repressilator circuit.
Q33797254	Stochastic simulations of the tetracycline operon
Q28533292	Stochastic stabilization of phenotypic States: the genetic bistable switch as a case study
Q54615468	Stochastic suppression of gene expression oscillators under intercell coupling.
Q46685546	Stochastic switching as a survival strategy in fluctuating environments
Q34023196	Stochastic switching induced adaptation in a starved Escherichia coli population
Q33281141	Stochastic synchronization of genetic oscillator networks
Q29617360	Stochasticity in gene expression: from theories to phenotypes
Q28365103	Stochasticity in transcriptional regulation: origins, consequences, and mathematical representations
Q36095581	Stochasticity or the fatal 'imperfection' of cloning
Q31129063	Stochasticity, bistability and the wisdom of crowds: a model for associative learning in genetic regulatory networks
Q37729531	Strategies for protein synthetic biology.
Q64099481	Strategies in regulating glioblastoma signaling pathways and anti-invasion therapy
Q41023000	Stress-response balance drives the evolution of a network module and its host genome
Q51827715	Structural principles for periodic orbits in glass networks.
Q34598769	Structure and function of negative feedback loops at the interface of genetic and metabolic networks
Q24683513	Structure and function of the feed-forward loop network motif
Q35817179	Sufficient and necessary conditions for Lyapunov stability of genetic networks with SUM regulatory logic
Q40415705	Super-transient scaling in time-delay autonomous Boolean network motifs
Q36785269	Sustained oscillations in extended genetic oscillatory systems
Q35075492	Switch of sensitivity dynamics revealed with DyGloSA toolbox for dynamical global sensitivity analysis as an early warning for system's critical transition
Q40862173	Switchable genetic oscillator operating in quasi-stable mode
Q51639127	Symbolic dynamics and computation in model gene networks.
Q28601294	SynBioSS-aided design of synthetic biological constructs
Q51822085	Synchronization and clustering of synthetic genetic networks: a role for cis-regulatory modules.
Q48916964	Synchronization and local convergence analysis of networks with dynamic diffusive coupling.
Q51944444	Synchronization of electronic genetic networks.
Q51861524	Synchronization of genetic oscillators.
Q45062978	Synchronized DNA cycling across a bacterial population
Q51491869	Synchronizing genetic oscillators by signaling molecules.
Q33894343	Synchronizing genetic relaxation oscillators by intercell signaling
Q42728840	Synergistic Synthetic Biology: Units in Concert
Q57169472	Synthesis of control unit for future biocomputer
Q28547818	Synthesizing Configurable Biochemical Implementation of Linear Systems from Their Transfer Function Specifications
Q40150543	Synthesizing a novel genetic sequential logic circuit: a push-on push-off switch
Q48271402	Synthesizing artificial devices that redirect cellular information at will
Q33726226	Synthesizing genetic sequential logic circuit with clock pulse generator
Q41001797	Synthetic Biology Platform for Sensing and Integrating Endogenous Transcriptional Inputs in Mammalian Cells
Q47567791	Synthetic Biology between Self-Regulation and Public Discourse: Ethical Issues and the Many Roles of the Ethicist
Q89682079	Synthetic Biology for Terraformation Lessons from Mars, Earth, and the Microbiome
Q38784006	Synthetic Biology-The Synthesis of Biology
Q34829709	Synthetic Biology: A Bridge between Artificial and Natural Cells
Q34257757	Synthetic Biology: Bits and pieces come to life
Q39206961	Synthetic Biology: Engineering Living Systems from Biophysical Principles
Q46554724	Synthetic Gene Expression Circuits for Designing Precision Tools in Oncology
Q38857177	Synthetic Morphogenesis
Q36685861	Synthetic RNA circuits
Q33954134	Synthetic RNA modules for fine-tuning gene expression levels in yeast by modulating RNase III activity
Q64231486	Synthetic Switches and Regulatory Circuits in Plants
Q64947796	Synthetic Toolkit for Complex Genetic Circuit Engineering in Saccharomyces cerevisiae.
Q26998440	Synthetic analog and digital circuits for cellular computation and memory
Q46384419	Synthetic associative learning in engineered multicellular consortia.
Q38805497	Synthetic biology approaches in cancer immunotherapy, genetic network engineering, and genome editing
Q35225038	Synthetic biology approaches to improve biocatalyst identification in metagenomic library screening
Q38310499	Synthetic biology devices and circuits for RNA-based 'smart vaccines': a propositional review
Q26776378	Synthetic biology devices for in vitro and in vivo diagnostics
Q35057524	Synthetic biology for therapeutic applications
Q38427592	Synthetic biology guides biofuel production.
Q26995293	Synthetic biology in mammalian cells: next generation research tools and therapeutics
Q37754036	Synthetic biology in the analysis and engineering of signaling processes
Q37925394	Synthetic biology moving into the clinic
Q38788838	Synthetic biology routes to bio-artificial intelligence
Q28078320	Synthetic biology to access and expand nature's chemical diversity
Q36586096	Synthetic biology--putting engineering into biology
Q53392485	Synthetic biology. Dynamic genome engineering in living cells.
Q34702375	Synthetic biology. Genomically encoded analog memory with precise in vivo DNA writing in living cell populations
Q51555152	Synthetic biology: Building genetic containment.
Q46339074	Synthetic biology: Engineering explored
Q58929371	Synthetic biology: Enter the living machine
Q59267606	Synthetic biology: From the first synthetic cell to see its current situation and future development
Q46138224	Synthetic biology: Precision timing in a cell
Q39782355	Synthetic biology: a foundation for multi-scale molecular biology
Q35907569	Synthetic biology: advancing biological frontiers by building synthetic systems
Q33958771	Synthetic biology: applications come of age
Q35988630	Synthetic biology: insights into biological computation.
Q33981040	Synthetic biology: integrated gene circuits
Q26991913	Synthetic biology: lessons from engineering yeast MAPK signalling pathways
Q31059198	Synthetic biology: mapping the scientific landscape
Q24672399	Synthetic biology: new engineering rules for an emerging discipline
Q42919282	Synthetic biology: promises and challenges
Q51602891	Synthetic biology: starting from scratch.
Q34534926	Synthetic cell biology
Q36711501	Synthetic circuit of inositol phosphorylceramide synthase in Leishmania : a chemical biology approach
Q40091404	Synthetic circuits integrating logic and memory in living cells
Q28818778	Synthetic circuits that process multiple light and chemical signal inputs
Q36922643	Synthetic circuits, devices and modules
Q24634044	Synthetic conversion of a graded receptor signal into a tunable, reversible switch
Q35495012	Synthetic feedback control using an RNAi-based gene-regulatory device
Q42404665	Synthetic feedback loop model for increasing microbial biofuel production using a biosensor
Q42152728	Synthetic gene circuits for metabolic control: design trade-offs and constraints
Q36715725	Synthetic gene circuits: design with directed evolution
Q28246672	Synthetic gene networks that count
Q42174382	Synthetic human cell fate regulation by protein-driven RNA switches
Q27004099	Synthetic in vitro circuits
Q37993331	Synthetic in vitro transcription circuits
Q42172472	Synthetic lateral inhibition governs cell-type bifurcation with robust ratios.
Q37926924	Synthetic mammalian gene networks as a blueprint for the design of interactive biohybrid materials
Q90212671	Synthetic metabolic computation in a bioluminescence-sensing system
Q92545011	Synthetic microbial consortium with specific roles designated by genetic circuits for cooperative chemical production
Q58742109	Synthetic negative feedback circuits using engineered small RNAs
Q26747209	Synthetic promoter design for new microbial chassis
Q34995237	Synthetic protein scaffolds provide modular control over metabolic flux.
Q38844812	Synthetic strategies for plant signalling studies: molecular toolbox and orthogonal platforms.
Q26826954	Synthetic therapeutic gene circuits in mammalian cells
Q39551932	Synthetic two-way communication between mammalian cells
Q33590158	Systematic design methodology for robust genetic transistors based on I/O specifications via promoter-RBS libraries
Q34551665	Systems Biology-Derived Discoveries of Intrinsic Clocks
Q37405937	Systems and Synthetic biology: tackling genetic networks and complex diseases.
Q38153035	Systems approaches for synthetic biology: a pathway toward mammalian design
Q37679194	Systems biology as an integrated platform for bioinformatics, systems synthetic biology, and systems metabolic engineering
Q24650979	Systems biology: On the cell cycle and its switches
Q37691412	Systems metabolic engineering: genome-scale models and beyond
Q54483777	Taming Living Logic Using Formal Methods
Q36601206	Teaching bacteria a new language.
Q42224055	Temperature dependence of ssrA-tag mediated protein degradation
Q37901364	Temporal and spatial oscillations in bacteria
Q56535270	Ten years of synergy
Q24544957	The Bacillus subtilis sin operon: an evolvable network motif
Q33131302	The Constructor: a web application optimizing cloning strategies based on modules from the registry of standard biological parts
Q41864814	The EAL domain protein YciR acts as a trigger enzyme in a c-di-GMP signalling cascade in E. coli biofilm control
Q36961678	The Hsp90 capacitor, developmental remodeling, and evolution: the robustness of gene networks and the curious evolvability of metamorphosis
Q40669814	The JNK cascade as a biochemical switch in mammalian cells: ultrasensitive and all-or-none responses
Q28728419	The PLOS ONE synthetic biology collection: six years and counting
Q37189067	The Switch in a Genetic Toggle System with Lévy Noise
Q34423743	The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology.
Q37831976	The application of Tet repressor in prokaryotic gene regulation and expression
Q28478128	The bacterial nanorecorder: engineering E. coli to function as a chemical recording device
Q28660797	The biological microprocessor, or how to build a computer with biological parts
Q33505795	The capacity for multistability in small gene regulatory networks
Q42158249	The cellular Ising model: a framework for phase transitions in multicellular environments.
Q34808329	The dynamic microbe: green fluorescent protein brings bacteria to light
Q45339220	The dynamics of hybrid metabolic-genetic oscillators
Q51168235	The effect of negative feedback on noise propagation in transcriptional gene networks.
Q42583601	The effects of cascade length, kinetics and feedback loops on biological signal transduction dynamics in a simplified cascade model
Q46680813	The effects of intrinsic noise on the behaviour of bistable cell regulatory systems under quasi-steady state conditions.
Q34360772	The engineer's approach to biology
Q61817292	The finite state projection based Fisher information matrix approach to estimate information and optimize single-cell experiments
Q37542425	The impact of synthetic biology on drug discovery
Q34087717	The incoherent feedforward loop can provide fold-change detection in gene regulation
Q36902026	The influence of assortativity on the robustness and evolvability of gene regulatory networks upon gene birth
Q44485583	The inheritance of process: a dynamical systems approach
Q24610233	The interplay between transcription factors and microRNAs in genome-scale regulatory networks
Q28486543	The interplay of intrinsic and extrinsic bounded noises in biomolecular networks
Q29547498	The large-scale organization of metabolic networks
Q50750676	The limiting dynamics of a bistable molecular switch with and without noise.
Q35079971	The mathematical model of the Bcl-2 family mediated MOMP regulation can perform a non-trivial pattern recognition
Q87415582	The new drug circuit
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P6179	Dimensions Publication ID	1002786107
P356	DOI	10.1038/35002131
P3181	OpenCitations bibliographic resource ID	1011640
P698	PubMed publication ID	10659857
P5875	ResearchGate publication ID	12654725

P2093	author name string	C R Cantor
		J J Collins
		T S Gardner
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P433	issue	6767
P407	language of work or name	English	Q1860
P921	main subject	Escherichia coli	Q25419
P304	page(s)	339-42
P577	publication date	2000-01-20
P1433	published in	Nature	Q180445
P1476	title	Construction of a genetic toggle switch in Escherichia coli
P478	volume	403

Construction of a genetic toggle switch in Escherichia coli

scientific article (publication date: 20 January 2000)

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