review article | Q7318358 |
scholarly article | Q13442814 |
P2093 | author name string | Pierre-Yves Bourguignon | |
Maxime Durot | |||
Vincent Schachter | |||
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Elucidation and structural analysis of conserved pools for genome-scale metabolic reconstructions | Q34188505 | ||
k-Cone analysis: determining all candidate values for kinetic parameters on a network scale | Q34189294 | ||
The global transcriptional regulatory network for metabolism in Escherichia coli exhibits few dominant functional states. | Q34244913 | ||
Systematic analysis of conservation relations in Escherichia coli genome-scale metabolic network reveals novel growth media | Q34481468 | ||
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Multiple high-throughput analyses monitor the response of E. coli to perturbations | Q34578020 | ||
Integrated analysis of regulatory and metabolic networks reveals novel regulatory mechanisms in Saccharomyces cerevisiae | Q34591168 | ||
The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli | Q34785166 | ||
Two approaches for metabolic pathway analysis? | Q35062587 | ||
Thirteen years of building constraint-based in silico models of Escherichia coli | Q35109629 | ||
Missing genes in metabolic pathways: a comparative genomics approach | Q35114448 | ||
Metabolic pathways in the post-genome era. | Q35135595 | ||
Modeling methanogenesis with a genome-scale metabolic reconstruction of Methanosarcina barkeri | Q35193476 | ||
Metabolic networks in motion: 13C-based flux analysis | Q35194034 | ||
AMIGene: Annotation of MIcrobial Genes | Q35208274 | ||
Reconstruction and validation of Saccharomyces cerevisiae iND750, a fully compartmentalized genome-scale metabolic model | Q35574107 | ||
Metabolic modeling of a mutualistic microbial community. | Q35742362 | ||
Use of genome-scale microbial models for metabolic engineering | Q35753258 | ||
Systems approach to refining genome annotation | Q35768707 | ||
Metabolic control analysis: a survey of its theoretical and experimental development | Q35860764 | ||
Metabolite essentiality elucidates robustness of Escherichia coli metabolism | Q35939983 | ||
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Measuring the metabolome: current analytical technologies | Q36106252 | ||
Expanded metabolic reconstruction of Helicobacter pylori (iIT341 GSM/GPR): an in silico genome-scale characterization of single- and double-deletion mutants | Q36217271 | ||
Chemoinformatics: a new field with a long tradition | Q36264187 | ||
Computational prediction and experimental verification of the gene encoding the NAD+/NADP+-dependent succinate semialdehyde dehydrogenase in Escherichia coli. | Q36314771 | ||
Systems metabolic engineering of Escherichia coli for L-threonine production | Q36327201 | ||
Transcriptome meets metabolome: hierarchical and metabolic regulation of the glycolytic pathway | Q43668049 | ||
Characterizing the metabolic phenotype: A phenotype phase plane analysis | Q43824264 | ||
Stoichiometric model for evaluating the metabolic capabilities of the facultative methylotroph Methylobacterium extorquens AM1, with application to reconstruction of C(3) and C(4) metabolism | Q43937903 | ||
The genome-scale metabolic extreme pathway structure in Haemophilus influenzae shows significant network redundancy. | Q44019204 | ||
Ab initio reconstruction of metabolic pathways. | Q44610910 | ||
Investigating metabolite essentiality through genome-scale analysis of Escherichia coli production capabilities | Q45238685 | ||
MetaFluxNet, a program package for metabolic pathway construction and analysis, and its use in large-scale metabolic flux analysis of Escherichia coli. | Q45261662 | ||
In silico design and adaptive evolution of Escherichia coli for production of lactic acid. | Q46023396 | ||
Combining pathway analysis with flux balance analysis for the comprehensive study of metabolic systems | Q46109374 | ||
Genome-scale reconstruction and in silico analysis of the Clostridium acetobutylicum ATCC 824 metabolic network | Q46402492 | ||
An optimization framework for identifying reaction activation/inhibition or elimination candidates for overproduction in microbial systems | Q46731656 | ||
High-throughput metabolic flux analysis based on gas chromatography-mass spectrometry derived 13C constraints. | Q47233123 | ||
Metabolic network analysis of the causes and evolution of enzyme dispensability in yeast | Q47363112 | ||
Monte Carlo sampling can be used to determine the size and shape of the steady-state flux space | Q47417801 | ||
From Annotated Genomes to Metabolic Flux Models and Kinetic Parameter Fitting | Q47418924 | ||
Optimization-based framework for inferring and testing hypothesized metabolic objective functions | Q47995846 | ||
Detection of stoichiometric inconsistencies in biomolecular models | Q48326559 | ||
Analysis of growth of Lactobacillus plantarum WCFS1 on a complex medium using a genome-scale metabolic model | Q51114019 | ||
Identifying gene targets for the metabolic engineering of lycopene biosynthesis in Escherichia coli | Q51471154 | ||
Construction of lycopene-overproducing E. coli strains by combining systematic and combinatorial gene knockout targets | Q51506025 | ||
Minimal cut sets in biochemical reaction networks | Q51637467 | ||
MetaCyc: a multiorganism database of metabolic pathways and enzymes | Q24538678 | ||
Phenotype microarrays for high-throughput phenotypic testing and assay of gene function | Q24619199 | ||
Enzyme-specific profiles for genome annotation: PRIAM | Q24642072 | ||
KEGG for linking genomes to life and the environment | Q24650347 | ||
The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities | Q24655269 | ||
Investigating the metabolic capabilities of Mycobacterium tuberculosis H37Rv using the in silico strain iNJ661 and proposing alternative drug targets | Q24669561 | ||
STRING 7--recent developments in the integration and prediction of protein interactions | Q24675384 | ||
Essential Bacillus subtilis genes | Q24681292 | ||
BRENDA, AMENDA and FRENDA: the enzyme information system in 2007 | Q24684248 | ||
Genome-scale reconstruction of the metabolic network in Staphylococcus aureus N315: an initial draft to the two-dimensional annotation | Q24794109 | ||
A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases | Q24800167 | ||
Prolinks: a database of protein functional linkages derived from coevolution | Q24801555 | ||
IdentiCS--identification of coding sequence and in silico reconstruction of the metabolic network directly from unannotated low-coverage bacterial genome sequence | Q24803112 | ||
Modeling Lactococcus lactis using a genome-scale flux model | Q24812834 | ||
Hybrid dynamic/static method for large-scale simulation of metabolism | Q24815754 | ||
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes | Q24817116 | ||
The University of Minnesota Biocatalysis/Biodegradation Database: the first decade | Q25255179 | ||
BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems | Q25255639 | ||
Evolutionary programming as a platform for in silico metabolic engineering | Q25257616 | ||
Improved microbial gene identification with GLIMMER | Q27860463 | ||
Correlation between protein and mRNA abundance in yeast | Q28137554 | ||
InterPro--an integrated documentation resource for protein families, domains and functional sites | Q28142845 | ||
A general definition of metabolic pathways useful for systematic organization and analysis of complex metabolic networks | Q28145745 | ||
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models | Q28212902 | ||
Analysis of optimality in natural and perturbed metabolic networks | Q28213254 | ||
Metabolic network structure determines key aspects of functionality and regulation | Q28214885 | ||
The Pathway Tools software | Q28217270 | ||
Systematic genome-wide screens of gene function | Q28237409 | ||
Global organization of metabolic fluxes in the bacterium Escherichia coli | Q28247038 | ||
Advances in the prediction of protein targeting signals | Q28264601 | ||
Comparison of network-based pathway analysis methods | Q28274818 | ||
The genome sequence of the capnophilic rumen bacterium Mannheimia succiniciproducens | Q28283096 | ||
Minimum information requested in the annotation of biochemical models (MIRIAM) | Q28285448 | ||
Multidimensional annotation of the Escherichia coli K-12 genome | Q36360689 | ||
Towards multidimensional genome annotation | Q36371202 | ||
A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1. | Q36534931 | ||
The evolution of modularity in bacterial metabolic networks. | Q36657624 | ||
The University of Minnesota pathway prediction system: predicting metabolic logic | Q36749366 | ||
Applications of fluorescence microscopy to single bacterial cells | Q36756250 | ||
Annotation, comparison and databases for hundreds of bacterial genomes | Q37010805 | ||
Metabolic flux analysis and metabolic engineering of microorganisms | Q37063035 | ||
Opportunities for renewable bioenergy using microorganisms | Q37145954 | ||
Application of systems biology for bioprocess development | Q37201074 | ||
Microbial biodegradation of polyaromatic hydrocarbons | Q37228802 | ||
Toward a science of metabolic engineering | Q37755854 | ||
Global functional profiling of gene expression. | Q38522897 | ||
Exploiting the pathway structure of metabolism to reveal high-order epistasis | Q38565870 | ||
Observing metabolic functions at the genome scale | Q38606272 | ||
Metabolic flux analysis in a nonstationary system: fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol | Q39236380 | ||
Can single knockouts accurately single out gene functions? | Q39667259 | ||
Genome-scale metabolic model of Helicobacter pylori 26695. | Q39679903 | ||
In silico reconstruction of the metabolic pathways of Lactobacillus plantarum: comparing predictions of nutrient requirements with those from growth experiments. | Q39801154 | ||
Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110. | Q39916365 | ||
Utilization of energy for growth and maintenance in continuous and batch cultures of microorganisms. A reevaluation of the method for the determination of ATP production by measuring molar growth yields | Q39926656 | ||
Genome-scale in silico models of E. coli have multiple equivalent phenotypic states: assessment of correlated reaction subsets that comprise network states. | Q39968205 | ||
OptStrain: a computational framework for redesign of microbial production systems. | Q40299930 | ||
In silico genome-scale reconstruction and validation of the Staphylococcus aureus metabolic network. | Q40390034 | ||
TransportDB: a relational database of cellular membrane transport systems | Q40403078 | ||
GenProtEC: an updated and improved analysis of functions of Escherichia coli K-12 proteins | Q40403442 | ||
New insights into the alternative D-glucarate degradation pathway. | Q40446982 | ||
Flux coupling analysis of genome-scale metabolic network reconstructions. | Q40497938 | ||
In Silico Atomic Tracing by Substrate-Product Relationships in Escherichia coli Intermediary Metabolism | Q40830325 | ||
Experimental and computational assessment of conditionally essential genes in Escherichia coli | Q41063583 | ||
Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions | Q41374953 | ||
Assessment of the metabolic capabilities of Haemophilus influenzae Rd through a genome-scale pathway analysis | Q41724916 | ||
Thermodynamics-based metabolic flux analysis | Q41874839 | ||
Metabolic flux elucidation for large-scale models using 13C labeled isotopes | Q41918100 | ||
Formulating genome-scale kinetic models in the post-genome era. | Q42030401 | ||
GSMN-TB: a web-based genome-scale network model of Mycobacterium tuberculosis metabolism | Q42130341 | ||
Optimization based automated curation of metabolic reconstructions | Q42431633 | ||
Genome-scale model for Clostridium acetobutylicum: Part I. Metabolic network resolution and analysis | Q42581256 | ||
Genome-scale analysis of Streptomyces coelicolor A3(2) metabolism | Q42658345 | ||
Modeling Neisseria meningitidis metabolism: from genome to metabolic fluxes | Q42744347 | ||
A genome-scale computational study of the interplay between transcriptional regulation and metabolism | Q42801030 | ||
Elucidation of an alternate isoleucine biosynthesis pathway in Geobacter sulfurreducens | Q43067116 | ||
Predicting genes for orphan metabolic activities using phylogenetic profiles | Q43227038 | ||
Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling | Q43234569 | ||
Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli. | Q43575020 | ||
Exploring the diversity of complex metabolic networks. | Q33210262 | ||
Metabolic functions of duplicate genes in Saccharomyces cerevisiae | Q33224556 | ||
Metabolite coupling in genome-scale metabolic networks | Q33235593 | ||
GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes | Q33237292 | ||
Identifying metabolic enzymes with multiple types of association evidence | Q33237950 | ||
High-throughput transposon mutagenesis of Corynebacterium glutamicum and construction of a single-gene disruptant mutant library | Q33242161 | ||
Metatool 5.0: fast and flexible elementary modes analysis | Q33244990 | ||
Accelerating the reconstruction of genome-scale metabolic networks | Q33246681 | ||
Mass spectrometry-based metabolomics | Q33254576 | ||
ScrumPy: metabolic modelling with Python | Q33258140 | ||
Systematic assignment of thermodynamic constraints in metabolic network models | Q33264473 | ||
Toward the automated generation of genome-scale metabolic networks in the SEED. | Q33282913 | ||
Estimation of the number of extreme pathways for metabolic networks | Q33300475 | ||
Co-regulation of metabolic genes is better explained by flux coupling than by network distance | Q33316819 | ||
LibSBML: an API library for SBML. | Q33318336 | ||
UniProtKB/Swiss-Prot | Q33320620 | ||
Estimating the size of the solution space of metabolic networks. | Q33335945 | ||
The Systems Biology Research Tool: evolvable open-source software | Q33347636 | ||
Large-scale computation of elementary flux modes with bit pattern trees | Q33357233 | ||
Assignment of endogenous substrates to enzymes by global metabolite profiling | Q28292223 | ||
Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data | Q28306582 | ||
Identification of genome-scale metabolic network models using experimentally measured flux profiles | Q28469016 | ||
Iterative reconstruction of transcriptional regulatory networks: an algorithmic approach | Q28469211 | ||
Metabolic reconstruction and modeling of nitrogen fixation in Rhizobium etli | Q28469320 | ||
Context-specific metabolic networks are consistent with experiments | Q28472711 | ||
A genome-scale metabolic reconstruction of Pseudomonas putida KT2440: iJN746 as a cell factory | Q28756812 | ||
Putative regulatory sites unraveled by network-embedded thermodynamic analysis of metabolome data | Q28766251 | ||
Regulatory on/off minimization of metabolic flux changes after genetic perturbations | Q28769658 | ||
Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth | Q29397612 | ||
An ordered, nonredundant library of Pseudomonas aeruginosa strain PA14 transposon insertion mutants | Q29614860 | ||
Comprehensive transposon mutant library of Pseudomonas aeruginosa | Q29614861 | ||
A genome-scale metabolic reconstruction for Escherichia coli K-12 MG1655 that accounts for 1260 ORFs and thermodynamic information | Q29615371 | ||
Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox | Q29615372 | ||
The effects of alternate optimal solutions in constraint-based genome-scale metabolic models | Q29616019 | ||
Optknock: a bilevel programming framework for identifying gene knockout strategies for microbial strain optimization | Q29616020 | ||
Genome-scale models of microbial cells: evaluating the consequences of constraints | Q29616789 | ||
The universal protein resource (UniProt) | Q29617074 | ||
GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions | Q29617560 | ||
In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data | Q29618471 | ||
Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research | Q29619122 | ||
Genome-scale metabolic network analysis of the opportunistic pathogen Pseudomonas aeruginosa PAO1 | Q30441313 | ||
Dynamic analysis of integrated signaling, metabolic, and regulatory networks | Q30441717 | ||
Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli | Q30479887 | ||
Integrated network reconstruction, visualization and analysis using YANAsquare. | Q30480219 | ||
A priori analysis of metabolic flux identifiability from (13)C-labeling data | Q30658160 | ||
Biochemical and molecular characterization of the Bacillus subtilis acetoin catabolic pathway. | Q30714461 | ||
Ab initio prediction of metabolic networks using Fourier transform mass spectrometry data | Q30747131 | ||
Reconstruction of metabolic networks from genome data and analysis of their global structure for various organisms | Q30763008 | ||
Integrating high-throughput and computational data elucidates bacterial networks | Q30928624 | ||
Integration of gene expression data into genome-scale metabolic models | Q30970854 | ||
The model organism as a system: integrating 'omics' data sets | Q31032864 | ||
Review: on the analysis and interpretation of correlations in metabolomic data | Q31044152 | ||
Distinguishing enzymes using metabolome data for the hybrid dynamic/static method | Q31113070 | ||
anNET: a tool for network-embedded thermodynamic analysis of quantitative metabolome data | Q31152793 | ||
Co-clustering of biological networks and gene expression data | Q32186692 | ||
A computational approach to measuring coherence of gene expression in pathways | Q33203873 | ||
P275 | copyright license | Creative Commons Attribution 2.5 Generic | Q18810333 |
P433 | issue | 1 | |
P921 | main subject | bacteria | Q10876 |
bacterial genome | Q4839988 | ||
biomedical investigative technique | Q66648976 | ||
P304 | page(s) | 164-190 | |
P577 | publication date | 2008-12-03 | |
2009-01-01 | |||
P1433 | published in | FEMS Microbiology Reviews | Q15762226 |
P1476 | title | Genome-scale models of bacterial metabolism: reconstruction and applications | |
P478 | volume | 33 |
Q34497524 | 'Unknown' proteins and 'orphan' enzymes: the missing half of the engineering parts list--and how to find it |
Q57269512 | 50 Shades of Rule Composition |
Q64911785 | A 5-formyltetrahydrofolate cycloligase paralog from all domains of life: comparative genomic and experimental evidence for a cryptic role in thiamin metabolism. |
Q38770026 | A Diverse Community To Study Communities: Integration of Experiments and Mathematical Models To Study Microbial Consortia |
Q36399180 | A genome-scale metabolic reconstruction of Lysinibacillus sphaericus unveils unexploited biotechnological potentials |
Q27014752 | A metabolic network approach for the identification and prioritization of antimicrobial drug targets |
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Q33939651 | A new view of the bacterial cytosol environment |
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Q35178614 | Accomplishments in genome-scale in silico modeling for industrial and medical biotechnology |
Q59210543 | Accurate Microbial Genome Annotation Using an Integrated and User-Friendly Environment for Community Expertise of Gene Functions: The MicroScope Platform |
Q58831906 | Algae Genome-Scale Reconstruction, Modelling and Applications |
Q39716484 | Analysis of heterologous taxadiene production in K- and B-derived Escherichia coli |
Q29031028 | Applications of genome-scale metabolic reconstructions |
Q37971381 | Applications of system-level models of metabolism for analysis of bacterial physiology and identification of new drug targets |
Q38121257 | Applying systems biology methods to the study of human physiology in extreme environments |
Q56913653 | Assignment of Novel Functions to Helicobacter pylori 26695’s Genome |
Q37285728 | Bacillus subtilis as potential producer for polyhydroxyalkanoates |
Q21284353 | BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions |
Q46426262 | Biomedical applications of genome-scale metabolic network reconstructions of human pathogens |
Q34539646 | Chapter 12: Human microbiome analysis |
Q47865848 | Clarifying the regulation of NO/N2O production in Nitrosomonas europaea during anoxic-oxic transition via flux balance analysis of a metabolic network model |
Q40256907 | Clostridioides difficile 630Δerm in silico and in vivo - quantitative growth and extensive polysaccharide secretion. |
Q28538495 | Combining chemoinformatics with bioinformatics: in silico prediction of bacterial flavor-forming pathways by a chemical systems biology approach "reverse pathway engineering" |
Q37788044 | Comparative systems biology: from bacteria to man |
Q41846171 | Computational reconstruction of tissue‐specific metabolic models: application to human liver metabolism |
Q38010422 | Computational systems biology and in silico modeling of the human microbiome |
Q38013124 | Computational tools for metabolic engineering. |
Q37977830 | Computational tools for the synthetic design of biochemical pathways |
Q41810179 | Construction of a genome-scale kinetic model of mycobacterium tuberculosis using generic rate equations |
Q30499238 | Core and panmetabolism in Escherichia coli |
Q64226353 | Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems |
Q66679640 | Current status and applications of genome-scale metabolic models |
Q42128459 | Designing minimal microbial strains of desired functionality using a genetic algorithm |
Q38179033 | Drug resistance to Mycobacterium tuberculosis: from the traditional Chinese view to modern systems biology |
Q36068883 | Dynamic epistasis for different alleles of the same gene |
Q38053353 | Elementary Mode Analysis: A Useful Metabolic Pathway Analysis Tool for Reprograming Microbial Metabolic Pathways |
Q34536141 | Elimination of thermodynamically infeasible loops in steady-state metabolic models |
Q44306363 | Engineering of carboligase activity reaction in Candida glabrata for acetoin production |
Q33612489 | Enhancement of acetoin production in Candida glabrata by in silico-aided metabolic engineering |
Q50550759 | EnzDP: improved enzyme annotation for metabolic network reconstruction based on domain composition profiles. |
Q30572301 | Evaluation of a Genome-Scale In Silico Metabolic Model for Geobacter metallireducens by Using Proteomic Data from a Field Biostimulation Experiment |
Q34400247 | Exploration of the core metabolism of symbiotic bacteria |
Q47836918 | FOCuS: a metaheuristic algorithm for computing knockouts from genome-scale models for strain optimization. |
Q42686494 | Fast thermodynamically constrained flux variability analysis. |
Q45814645 | Flux modules in metabolic networks |
Q28484577 | Fumaric Acid Production in Saccharomyces cerevisiae by In Silico Aided Metabolic Engineering |
Q33859130 | Functional characterization of alternate optimal solutions of Escherichia coli's transcriptional and translational machinery |
Q36210637 | Functional genomics tools applied to plant metabolism: a survey on plant respiration, its connections and the annotation of complex gene functions |
Q37718885 | Functional single-cell analyses: flow cytometry and cell sorting of microbial populations and communities |
Q43713406 | GEMSiRV: a software platform for GEnome-scale metabolic model simulation, reconstruction and visualization |
Q55048778 | GROOLS: reactive graph reasoning for genome annotation through biological processes. |
Q42939175 | Generation and Evaluation of a Genome-Scale Metabolic Network Model of Synechococcus elongatus PCC7942. |
Q92923730 | Genome-Scale Metabolic Network Models of Bacillus Species Suggest that Model Improvement is Necessary for Biotechnological Applications |
Q38063161 | Genome-scale metabolic model in guiding metabolic engineering of microbial improvement |
Q90713693 | Genome-scale metabolic models of Microbacterium species isolated from a high altitude desert environment |
Q46890072 | Genome-scale metabolic reconstruction and constraint-based modelling of the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125. |
Q39825053 | Genome-scale modeling and in silico analysis of ethanologenic bacteria Zymomonas mobilis. |
Q46308193 | Genome-scale modeling of yeast: chronology, applications and critical perspectives. |
Q21202780 | Genome-scale reconstruction of metabolic network for a halophilic extremophile, Chromohalobacter salexigens DSM 3043 |
Q41889233 | Growth Trade-Offs Accompany the Emergence of Glycolytic Metabolism in Shewanella oneidensis MR-1. |
Q38641853 | Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information |
Q36286169 | How important is thermodynamics for identifying elementary flux modes? |
Q35081443 | ITEP: an integrated toolkit for exploration of microbial pan-genomes |
Q33845728 | Identification of metabolic pathways essential for fitness of Salmonella Typhimurium in vivo |
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Q46244833 | Metabolic Model Reconstruction and Analysis of an Artificial Microbial Ecosystem. |
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Q34248365 | Metabolic classification of microbial genomes using functional probes |
Q33803311 | Metabolic engineering for production of biorenewable fuels and chemicals: contributions of synthetic biology |
Q37862442 | Metabolic engineering in dark fermentative hydrogen production; theory and practice |
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Q33546187 | Metabolic modeling and analysis of the metabolic switch in Streptomyces coelicolor |
Q38687022 | Metabolic modeling to identify engineering targets for Komagataella phaffii: The effect of biomass composition on gene target identification. |
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Q38651898 | Metabolic pathway and cell adaptation mechanisms revealed through genomic, proteomic and transcription analysis of a Sphingomonas haloaromaticamans strain degrading ortho-phenylphenol. |
Q37601038 | Metabolic systems biology |
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Q35228780 | Microbial Metabolomics |
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Q28535339 | Modeling of non-steroidal anti-inflammatory drug effect within signaling pathways and miRNA-regulation pathways |
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Q28484385 | MultiMetEval: comparative and multi-objective analysis of genome-scale metabolic models |
Q31056287 | Multiplex methods provide effective integration of multi-omic data in genome-scale models |
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