A compendium of gene expression in normal human tissues

scientific article

A compendium of gene expression in normal human tissues is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1152/PHYSIOLGENOMICS.00040.2001
P698PubMed publication ID11773596
P5875ResearchGate publication ID11583604

P2093author name stringYoshida T
Crum CP
Stephanopoulos G
Gullans SR
Hsiao LL
Hong R
MacDonald ME
Pratt RE
Frosch MP
Lee KF
Mutter GL
Milford EL
Dillon W
Clark KE
Warrington JA
Dangond F
Bueno R
Jensen RV
Weng Z
Mahadevappa M
Misra J
Haverty P
P2860cites workThe Sequence of the Human GenomeQ22065842
Gitelman's variant of Bartter's syndrome, inherited hypokalaemic alkalosis, is caused by mutations in the thiazide-sensitive Na-Cl cotransporterQ24311551
Expression monitoring by hybridization to high-density oligonucleotide arraysQ27860473
Distinct types of diffuse large B-cell lymphoma identified by gene expression profilingQ27860529
Molecular classification of cancer: class discovery and class prediction by gene expression monitoringQ27861072
Discovery and analysis of inflammatory disease-related genes using cDNA microarraysQ28379596
Aldose reductase and the role of the polyol pathway in diabetic nephropathyQ28645739
Classification of human ovarian tumors using multivariate data analysis of polypeptide expression patternsQ30595087
Genome changes and gene expression in human solid tumorsQ30841588
A novel syndrome of variant leukocyte adhesion deficiency involving defects in adhesion mediated by beta1 and beta2 integrinsQ31828189
Analysis of gene expression in mutiple sclerosis lesions using cDNA microarraysQ33873680
Validation of tissue microarray technology in breast carcinomaQ38462822
Transgenic mice overexpressing insulin-like growth factor-II in beta cells develop type 2 diabetes.Q40716676
A novel leukocyte adhesion deficiency caused by expressed but nonfunctional beta2 integrins Mac-1 and LFA-1.Q40848368
How self-tolerance and the immunosuppressive drug FK506 prevent B-cell mitogenesis.Q41721329
Diabetic somatic polyneuropathy. Pathogenesis, clinical manifestations and therapeutic conceptsQ43458925
Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genesQ46136481
Associations of IGF2 ApaI RFLP and INS VNTR class I allele size with obesityQ47253004
G-250A substitution in promoter of hepatic lipase gene is associated with dyslipidemia and insulin resistance in healthy control subjects and in members of families with familial combined hyperlipidemia.Q51555072
Circulating levels of free insulin-like growth factors in obese subjects: the impact of type 2 diabetes.Q51559519
Increased secretory leukoprotease inhibitor in patients with nonsmall cell lung carcinoma.Q53332434
Hormone therapy failure in human prostate cancer: analysis by complementary DNA and tissue microarrays.Q55033361
Everyone's genomeQ59090643
P433issue2
P304page(s)97-104
P577publication date2001-12-21
P1433published inPhysiological GenomicsQ2506446
P1476titleA compendium of gene expression in normal human tissues
P478volume7

Reverse relations

cites work (P2860)
Q47645675(TG:CA)(n) repeats in human housekeeping genes
Q24797220A DNA microarray survey of gene expression in normal human tissues
Q28077428A common molecular signature in ASD gene expression: following Root 66 to autism
Q34334983A comparative study of genome-wide transcriptional profiles of primary hepatocytes in collagen sandwich and monolayer cultures
Q33927410A compendium of canine normal tissue gene expression
Q21245339A comprehensive functional analysis of tissue specificity of human gene expression
Q39550087A model for random genetic damage directing selection of diploid or aneuploid tumours.
Q42398133A panel of cancer-testis genes exhibiting broad-spectrum expression in haematological malignancies.
Q39472758A protein network descriptor server and its use in studying protein, disease, metabolic and drug targeted networks
Q98154728A simple and highly efficient method for multi-allelic CRISPR-Cas9 editing in primary cell cultures
Q24613870A systematic, large-scale resequencing screen of X-chromosome coding exons in mental retardation
Q33556384A tissue-specific gene expression template portrays heart development and pathology
Q54102312Abundance of dinucleotide repeats and gene expression are inversely correlated: a role for gene function in addition to intron length.
Q42125313Age-related changes in relative expression of real-time PCR housekeeping genes in human skeletal muscle
Q33859024Alignment of gene expression profiles from test samples against a reference database: New method for context-specific interpretation of microarray data
Q38344964Altered gene expression in acute systemic inflammation detected by complete coverage of the human liver transcriptome
Q33891878An atlas of human gene expression from massively parallel signature sequencing (MPSS).
Q33228016Annotating nonspecific SAGE tags with microarray data
Q48316865Apparent versus true gene expression changes of three hypoxia-related genes in autopsy derived tissue and the importance of normalisation
Q24793390Application of independent component analysis to microarrays
Q24802814Assessment of clusters of transcription factor binding sites in relationship to human promoter, CpG islands and gene expression
Q34483973Association of genes with physiological functions by comparative analysis of pooled expression microarray data
Q31033067Biclustering of gene expression data by Non-smooth Non-negative Matrix Factorization.
Q57129115Biomarkers of human gastrointestinal tract regions
Q35024666Cancer diagnosis and microarrays
Q36909580Cancer karyotypes: survival of the fittest
Q33287501Cartilage-selective genes identified in genome-scale analysis of non-cartilage and cartilage gene expression
Q33317654Characterization of a newly developed chicken 44K Agilent microarray
Q51593313Characterization of gene expression profiles of T cells during anti-tumor response.
Q40100899Cloning and use of a coral 36B4 gene to study the differential expression of coral genes between light and dark conditions
Q35991464Common denominator genes that distinguish colorectal carcinoma from normal mucosa.
Q33510352Comparability of microarray data between amplified and non amplified RNA in colorectal carcinoma
Q39982150Comparative analysis of housekeeping and tissue-selective genes in human based on network topologies and biological properties.
Q33285065Comparison of target labeling methods for use with Affymetrix GeneChips
Q31093578Component retention in principal component analysis with application to cDNA microarray data
Q30002300Comprehensive comparison of large-scale tissue expression datasets
Q33334373Concordant gene expression in leukemia cells and normal leukocytes is associated with germline cis-SNPs
Q23916642Constructing molecular classifiers for the accurate prognosis of lung adenocarcinoma
Q37428337Control of mRNA stability contributes to low levels of nuclear poly(A) binding protein 1 (PABPN1) in skeletal muscle
Q33987983Could protein tertiary structure influence mammary transgene expression more than tissue specific codon usage?
Q63977424Current Awareness on Comparative and Functional Genomics
Q35360473Cyclin D1 represses gluconeogenesis via inhibition of the transcriptional coactivator PGC1α
Q50666890Cytokeratin 17 mRNA expression has potential for diagnostic marker of oral squamous cell carcinoma.
Q27480955De-regulation of common housekeeping genes in hepatocellular carcinoma
Q92819794Defining housekeeping genes suitable for RNA-seq analysis of the human allograft kidney biopsy tissue
Q33469919Definition, conservation and epigenetics of housekeeping and tissue-enriched genes
Q33225552Dense taxonomic EST sampling and its applications for molecular systematics of the Coleoptera (beetles).
Q33906412Dependence of mutational asymmetry on gene-expression levels in the human genome
Q33242904Detecting and profiling tissue-selective genes
Q36445848Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes
Q36409774Determination of suitable housekeeping genes for normalisation of quantitative real time PCR analysis of cells infected with human immunodeficiency virus and herpes viruses
Q34442779Development and application of bovine and porcine oligonucleotide arrays with protein-based annotation
Q55350987Differential expression patterns of housekeeping genes increase diagnostic and prognostic value in lung cancer.
Q54557534Differentiating human embryonic stem cells express a unique housekeeping gene signature.
Q33796560Discovering networks of perturbed biological processes in hepatocyte cultures
Q21092854Discovery of microvascular miRNAs using public gene expression data: miR-145 is expressed in pericytes and is a regulator of Fli1
Q30981112Disease genes and intracellular protein networks
Q55313924Divergent and convergent evolution of housekeeping genes in human-pig lineage.
Q35603002Do housekeeping genes exist?
Q90266644Dual Targeting of Histone Methyltransferase G9a and DNA-Methyltransferase 1 for the Treatment of Experimental Hepatocellular Carcinoma
Q30977337EST-based gene discovery in pig: virtual expression patterns and comparative mapping to human.
Q51601973Effect of acute heat shock on gene expression by human peripheral blood mononuclear cells.
Q33812210Effect of oxymatrine on the replication cycle of hepatitis B virus in vitro
Q47444133Enrichment of brain-related genes on the mammalian X chromosome is ancient and predates the divergence of synapsid and sauropsid lineages
Q92052916Epigenetic evolution and lineage histories of chronic lymphocytic leukaemia
Q34294766Estimation of groin recurrence risk in patients with squamous cell vulvar carcinoma by the assessment of marker gene expression in the lymph nodes
Q90155542Evaluating stably expressed genes in single cells
Q33260284Expoldb: expression linked polymorphism database with inbuilt tools for analysis of expression and simple repeats
Q28757247Expressed sequence tags as a tool for phylogenetic analysis of placental mammal evolution
Q33973028Expression cartography of human tissues using self organizing maps
Q33385008Expression profiles of switch-like genes accurately classify tissue and infectious disease phenotypes in model-based classification
Q27488219Expression profiles of urbilaterian genes uniquely shared between honey bee and vertebrates
Q34026208Expression profiling of autism candidate genes during human brain development implicates central immune signaling pathways
Q24815689FAST DB: a website resource for the study of the expression regulation of human gene products
Q31122610First comprehensive mapping of cartilage transcripts to the human genome
Q33268930Frequency distribution of TATA Box and extension sequences on human promoters
Q24796018Functional bias and spatial organization of genes in mutational hot and cold regions in the human genome
Q52125624Further defining housekeeping, or "maintenance," genes Focus on "A compendium of gene expression in normal human tissues".
Q44489870GNCPro: Navigate Human Genes and Relationships Through Net-Walking
Q40359726GSTZ1 expression and chloride concentrations modulate sensitivity of cancer cells to dichloroacetate
Q52022087Gene expression analyses reveal molecular relationships among 20 regions of the human CNS.
Q33467107Gene expression profiling in peanut using high density oligonucleotide microarrays
Q33325230Gene expression profiling in porcine maternal infanticide: a model for puerperal psychosis
Q33223853Gene expression profiling of jejunal Peyer's patches in juvenile and adult pigs
Q46264271Gene expression studies of reference genes for quantitative real-time PCR: an overview in insects.
Q44602945Gene expression variation in the adult human retina
Q50083195GeneGini: Assessment via the Gini Coefficient of Reference "Housekeeping" Genes and Diverse Human Transporter Expression Profiles
Q36885589Genetic Screening for Arabidopsis Mutants Defective in STA1 Regulation under Thermal Stress Implicates the Existence of Regulators of Its Specific Expression, and the Genetic Interactions in the Stress Signaling Pathways
Q34291141Genome-wide distribution of macroH2A1 histone variants in mouse liver chromatin
Q90042853Genome-wide expression profiling reveals increased stability and mitochondrial energy metabolism of the human liver cell line HepaRG-CAR
Q42107685Genome-wide maps of polyadenylation reveal dynamic mRNA 3'-end formation in mammalian cell lineages
Q38517811Genome-wide screening of dioxin-responsive genes in fetal brain: bioinformatic and experimental approaches
Q34718233Glioma cell death induced by irradiation or alkylating agent chemotherapy is independent of the intrinsic ceramide pathway
Q36029524HOXB7 Is an ERα Cofactor in the Activation of HER2 and Multiple ER Target Genes Leading to Endocrine Resistance
Q37053690High-throughput identification of reference genes for research and clinical RT-qPCR analysis of breast cancer samples
Q39888169Hits and misses from gene expression ratio measurements in cDNA microarray studies
Q33285439Housekeeping and tissue-specific genes in mouse tissues
Q41936340Housekeeping genes in prostate tumorigenesis
Q31152791How many human genes can be defined as housekeeping with current expression data?
Q42129590Hox genes are involved in vascular wall-resident multipotent stem cell differentiation into smooth muscle cells
Q33392867Human gene coexpression landscape: confident network derived from tissue transcriptomic profiles
Q34212688Human housekeeping genes are compact
Q22162505Human housekeeping genes, revisited
Q95840764Identification and Validation of Reference Genes for Quantitative Gene Expression Analysis in Ophraella communa
Q33411039Identification and validation of reference genes for quantitative RT-PCR normalization in wheat
Q46789069Identification of estrogen-responsive genes in the testis of sea bream (Sparus auratus) using suppression subtractive hybridization
Q33301044Identification of genes differentially expressed during prenatal development of skeletal muscle in two pig breeds differing in muscularity
Q30587052Identification of human HK genes and gene expression regulation study in cancer from transcriptomics data analysis
Q33983496Identification of human housekeeping genes and tissue-selective genes by microarray meta-analysis
Q35135096Identification of novel reference genes based on MeSH categories
Q33479558Identification of novel reference genes using multiplatform expression data and their validation for quantitative gene expression analysis
Q100415887Identification of putative master regulators in rheumatoid arthritis synovial fibroblasts using gene expression data and network inference
Q28386490Identification of reference genes across physiological states for qRT-PCR through microarray meta-analysis
Q41102725Identification of stable reference genes in differentiating human pluripotent stem cells.
Q90167356Identifying clusters of cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks
Q33754130Identifying estrogen receptor alpha target genes using integrated computational genomics and chromatin immunoprecipitation microarray
Q30606803Identifying subspace gene clusters from microarray data using low-rank representation
Q37856257Increasing recognition of the importance of aldehyde oxidase in drug development and discovery
Q51842668Individual variation of adipose gene expression and identification of covariated genes by cDNA microarrays.
Q45351930Influence of overlapping genes on the evolution of human hepatitis B virus
Q46556332Insights into the dN/dS ratio heterogeneity between brain specific genes and widely expressed genes in species of different complexity
Q24796114Insights into vertebrate evolution from the chicken genome sequence
Q53089247Integrative functional genomic delineation of the cascades of transcriptional changes involved in hepatocellular carcinoma progression.
Q39860879Interactive exploration of microarray gene expression patterns in a reduced dimensional space
Q31120275Large-scale integration of cancer microarray data identifies a robust common cancer signature
Q34304865Laser-Based Propagation of Human iPS and ES Cells Generates Reproducible Cultures with Enhanced Differentiation Potential
Q42580571Liver carcinogenesis by FOS-dependent inflammation and cholesterol dysregulation
Q91944069Liver organoids reproduce alpha-1 antitrypsin deficiency-related liver disease
Q79521372Looking for organization patterns of highly expressed genes: purine-pyrimidine composition of precursor mRNAs
Q33550910Matrix factorisation methods applied in microarray data analysis
Q47953380Measurement of the Number of Molecules of a Single mRNA Species in a Complex mRNA Preparation
Q33306690Microarray expression profiles of 20.000 genes across 23 healthy porcine tissues
Q53272007Microarray versus conventional prediction of lymph node metastasis in colorectal carcinoma.
Q36013207Microarrays, antiobesity and the liver
Q33262100Mining housekeeping genes with a Naive Bayes classifier
Q47112849Molecular cloning and characterization of porcine ribosomal protein L21.
Q35010198Molecular portraits and the family tree of cancer
Q60921242Molecular signatures of multiple myeloma progression through single cell RNA-Seq
Q35165109NRF2 deficiency reduces life span of mice administered thoracic irradiation
Q24624628Ontogeny of erythroid gene expression
Q21262977PSMB2 and RPL32 are suitable denominators to normalize gene expression profiles in bronchoalveolar cells
Q35077865Partitioning the human transcriptome using HKera, a novel classifier of housekeeping and tissue-specific genes
Q42570522Pattern Genes Suggest Functional Connectivity of Organs
Q35751663Patterns and rates of intron divergence between humans and chimpanzees
Q33600109Postmenopausal estrogen and progestin effects on the serum proteome
Q28478499Predicting housekeeping genes based on Fourier analysis
Q34117473Preservation of ranking order in the expression of human Housekeeping genes
Q24797793Promoter features related to tissue specificity as measured by Shannon entropy
Q37676826Proteomic risk markers for coronary heart disease and stroke: validation and mediation of randomized trial hormone therapy effects on these diseases.
Q47844541Quantitative assessment of the importance of dye switching and biological replication in cDNA microarray studies
Q40271086Quantitative profiling of housekeeping and Epstein-Barr virus gene transcription in Burkitt lymphoma cell lines using an oligonucleotide microarray
Q54372687RNA integrity in post-mortem samples: influencing parameters and implications on RT-qPCR assays.
Q61799219RNA-Seq Signatures Normalized by mRNA Abundance Allow Absolute Deconvolution of Human Immune Cell Types
Q34566179Reduction of the rate of poliovirus protein synthesis through large-scale codon deoptimization causes attenuation of viral virulence by lowering specific infectivity
Q33805379Relationship between amino acid composition and gene expression in the mouse genome.
Q35762302Repetitive sequence environment distinguishes housekeeping genes
Q84823219Runx-2 gene expression is associated with age-related changes of bone mineral density in the healthy young-adult population
Q33298670Salmonella induces prominent gene expression in the rat colon
Q37345251Selection of Reliable Reference Genes for Gene Expression Studies on Rhododendron molle G. Don.
Q92463796Selection of best reference genes for qRT-PCR analysis of human neural stem cells preconditioned with hypoxia or baicalein-enriched fraction extracted from Oroxylum indicum medicinal plant
Q33756897Selection of housekeeping genes as internal controls for quantitative RT-PCR analysis of the veined rapa whelk (Rapana venosa).
Q46348438Selection of novel reference genes for use in the human central nervous system: a BrainNet Europe Study
Q89505640Selection of reference genes for tissue/organ samples of adults of Eucryptorrhynchus scrobiculatus
Q61808456Selection of the optimal reference genes for expression analyses in different materials of
Q55311804Single cell transcriptome analysis of MCF-7 reveals consistently and inconsistently expressed gene groups each associated with distinct cellular localization and functions.
Q33406612Suitable reference genes for real-time PCR in human HBV-related hepatocellular carcinoma with different clinical prognoses
Q34498257Super paramagnetic clustering of DNA sequences
Q33313428Switch-like genes populate cell communication pathways and are enriched for extracellular proteins
Q27323883Systematic identification of gene family regulators in mouse and human embryonic stem cells
Q37065343Systematic method for determining an ideal housekeeping gene for real-time PCR analysis
Q33942462TFRC and ACTB as the best reference genes to quantify Urokinase Plasminogen Activator in breast cancer
Q37132817TRAF4, at the Crossroad between Morphogenesis and Cancer
Q30978543The completed human genome: implications for chemical biology
Q35108626The expanded human disease network combining protein-protein interaction information.
Q42658326The human gastrointestinal tract-specific transcriptome and proteome as defined by RNA sequencing and antibody-based profiling
Q35030963The immunogenomics of minor histocompatibility antigens.
Q28487946The landscape of host transcriptional response programs commonly perturbed by bacterial pathogens: towards host-oriented broad-spectrum drug targets
Q24811243The molecular portrait of in vitro growth by meta-analysis of gene-expression profiles
Q24791593The regulatory content of intergenic DNA shapes genome architecture
Q91558906The role and robustness of the Gini coefficient as an unbiased tool for the selection of Gini genes for normalising expression profiling data
Q37494068Tissue-specific codon usage and the expression of human genes
Q34452313Tissue-specific disallowance of housekeeping genes: the other face of cell differentiation.
Q34006509Tissue-specific gene expression templates for accurate molecular characterization of the normal physiological states of multiple human tissues with implication in development and cancer studies
Q33417875Topological and organizational properties of the products of house-keeping and tissue-specific genes in protein-protein interaction networks
Q33254333Transcriptional and structural impact of TATA-initiation site spacing in mammalian core promoters
Q50666202Transcriptional profiling of pig embryogenesis by using a 15-K member unigene set specific for pig reproductive tissues and embryos.
Q89072953Transcriptome-based identification of the optimal reference genes as internal controls for quantitative RT-PCR in razor clam (Sinonovacula constricta)
Q34875987Transcriptomic portrait of human Mesenchymal Stromal/Stem Cells isolated from bone marrow and placenta
Q38542626Understanding tissue expression evolution: from expression phylogeny to phylogenetic network
Q40594712Unique gene expression signatures of independently-derived human embryonic stem cell lines
Q38285855Untying the gordian knot: what we do and don't know about gender-specific medicine-keynote address for the 2014 Academic Emergency Medicine Consensus Conference
Q31148950Using formal concept analysis for microarray data comparison
Q27301621Using ribosomal protein genes as reference: a tale of caution
Q44925185Utility of the housekeeping genes 18S rRNA, beta-actin and glyceraldehyde-3-phosphate-dehydrogenase for normalization in real-time quantitative reverse transcriptase-polymerase chain reaction analysis of gene expression in human T lymphocytes
Q54636949Validation of a first-generation long-oligonucleotide microarray for transcriptional profiling in the pig.
Q43015135Validation of housekeeping genes for gene expression studies in an ice alga Chlamydomonas during freezing acclimation
Q30000656Validation of reference genes aiming accurate normalization of qRT-PCR data in Dendrocalamus latiflorus Munro
Q91908823Validation of reference genes for qRT-PCR data normalisation in lentil (Lens culinaris) under leaf developmental stages and abiotic stresses
Q46453106Verification of reference genes for relative quantification of gene expression by real-time reverse transcription PCR in the pig.
Q34589971Virus host protein interaction network analysis reveals that the HEV ORF3 protein may interrupt the blood coagulation process
Q51923343Whole genome expression profiling of the medial and lateral substantia nigra in Parkinson's disease.
Q64246923mTOR inhibition affects Yap1-β-catenin-induced hepatoblastoma growth and development

Search more.