Two mechanisms produce mutation hotspots at DNA breaks in Escherichia coli

scientific article published on 4 October 2012

Two mechanisms produce mutation hotspots at DNA breaks in Escherichia coli is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.CELREP.2012.08.033
P932PMC publication ID3607216
P698PubMed publication ID23041320
P5875ResearchGate publication ID232065651

P2093author name stringSusan M Rosenberg
Chandan Shee
Janet L Gibson
P2860cites workEnvironmental stress and lesion-bypass DNA polymerasesQ36486062
Too many mutants with multiple mutationsQ36491712
Stress-induced mutation via DNA breaks in Escherichia coli: a molecular mechanism with implications for evolution and medicineQ36496909
Molecular mechanisms of antibody somatic hypermutation.Q36747477
Stationary-phase mutation in the bacterial chromosome: recombination protein and DNA polymerase IV dependenceQ37096423
Stress-induced beta-lactam antibiotic resistance mutation and sequences of stationary-phase mutations in the Escherichia coli chromosome.Q37355812
The split-end model for homologous recombination at double-strand breaks and at Chi.Q37361171
Use of high throughput sequencing to observe genome dynamics at a single cell levelQ37469631
What limits the efficiency of double-strand break-dependent stress-induced mutation in Escherichia coli?Q37976150
Preventing replication stress to maintain genome stability: resolving conflicts between replication and transcriptionQ37998652
When polymerases collide: replication and the transcriptional organization of the E. coli chromosomeQ39641681
Genetics of bacterial ribosomesQ39713958
Analysis of cell size and DNA content in exponentially growing and stationary-phase batch cultures of Escherichia coliQ39839306
Collapse and repair of replication forks in Escherichia coliQ40416038
Adaptive evolution of highly mutable loci in pathogenic bacteriaQ40629814
The transcription factor DksA prevents conflicts between DNA replication and transcription machineryQ42550654
Hfr formation directed by tn10.Q42980403
The TGV transgenic vectors for single-copy gene expression from the Escherichia coli chromosomeQ43694249
Evidence of non-random mutation rates suggests an evolutionary risk management strategy.Q54338090
A switch from high-fidelity to error-prone DNA double-strand break repair underlies stress-induced mutation.Q54478818
Adaptive mutation by deletions in small mononucleotide repeats.Q54630365
Recombination in adaptive mutation.Q54635736
Recombination of bacteriophage lambda in recD mutants of Escherichia coli.Q54736666
Role of Escherichia coli RecBC enzyme in SOS inductionQ69926365
General antimutators are improbableQ70532050
Gene conversion as a focusing mechanism for correlated mutations: a hypothesisQ71265030
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collectionQ22122301
Mutational processes molding the genomes of 21 breast cancersQ24620915
Exploring protein fitness landscapes by directed evolutionQ24630945
RecBCD enzyme and the repair of double-stranded DNA breaksQ24650931
Interruptions in gene expression drive highly expressed operons to the leading strand of DNA replicationQ24810299
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR productsQ27860842
Increased mutagenesis and unique mutation signature associated with mitotic gene conversionQ27934880
The importance of repairing stalled replication forksQ29614220
Double-strand break end resection and repair pathway choiceQ29614422
Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp-catalyzed excision of the antibiotic-resistance determinantQ29615039
Four new derivatives of the broad-host-range cloning vector pBBR1MCS, carrying different antibiotic-resistance cassettesQ29615258
Hypermutability of damaged single-strand DNA formed at double-strand breaks and uncapped telomeres in yeast Saccharomyces cerevisiae.Q33385991
Spontaneous DNA breakage in single living Escherichia coli cellsQ33796363
Break-induced replication is highly inaccurateQ33828325
Genome-wide hypermutation in a subpopulation of stationary-phase cells underlies recombination-dependent adaptive mutationQ33886793
The SOS response regulates adaptive mutationQ33903483
Non random distribution of genomic features in breakpoint regions involved in chronic myeloid leukemia cases with variant t(9;22) or additional chromosomal rearrangementsQ33919931
Adaptive reversion of a frameshift mutation in Escherichia coliQ33958142
DNA synthesis errors associated with double-strand-break repairQ33965497
Evidence that stationary-phase hypermutation in the Escherichia coli chromosome is promoted by recombinationQ34609122
Damage-induced localized hypermutability.Q35002361
The dinB operon and spontaneous mutation in Escherichia coliQ35098519
Impact of a stress-inducible switch to mutagenic repair of DNA breaks on mutation in Escherichia coliQ35170976
Double-strand-break repair recombination in Escherichia coli: physical evidence for a DNA replication mechanism in vivoQ35208627
Mutations in clusters and showersQ35850075
Evidence for mutation showersQ35850189
Mutation as a stress response and the regulation of evolvabilityQ35869358
Clustered mutations in yeast and in human cancers can arise from damaged long single-strand DNA regions.Q35992079
Homologous recombination and its regulationQ36106937
Mutation hot spots in yeast caused by long-range clustering of homopolymeric sequencesQ36128650
Analysis and possible role of hyperrecombination in the termination region of the Escherichia coli chromosomeQ36151152
Identification and characterization of recD, a gene affecting plasmid maintenance and recombination in Escherichia coliQ36249724
P433issue4
P921main subjectEscherichia coliQ25419
P304page(s)714-721
P577publication date2012-10-04
P1433published inCell ReportsQ5058165
P1476titleTwo mechanisms produce mutation hotspots at DNA breaks in Escherichia coli
P478volume2

Reverse relations

cites work (P2860)
Q34590485A formal perturbation equation between genotype and phenotype determines the Evolutionary Action of protein-coding variations on fitness
Q35189852An underlying mechanism for the increased mutagenesis of lagging-strand genes in Bacillus subtilis
Q33602374Ancient genes establish stress-induced mutation as a hallmark of cancer
Q28547150Atypical Role for PhoU in Mutagenic Break Repair under Stress in Escherichia coli
Q35796604Cationic Peptides Facilitate Iron-induced Mutagenesis in Bacteria
Q92186243Cigarette smoke exposure redirects Staphylococcus aureus to a virulence profile associated with persistent infection
Q36663129DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.
Q37396897DNA polymerases are error-prone at RecA-mediated recombination intermediates.
Q52576549Discovery of Lineage-Specific Genome Change in Rice Through Analysis of Resequencing Data.
Q35028595Engineered proteins detect spontaneous DNA breakage in human and bacterial cells
Q37138672Enhancement of microhomology-mediated genomic rearrangements by transient loss of mouse Bloom syndrome helicase
Q38108358Evolutionary dynamics and information hierarchies in biological systems
Q64388893Fluorescent fusions of the N protein of phage Mu label DNA damage in living cells
Q92211702Hidden Markov models lead to higher resolution maps of mutation signature activity in cancer
Q37574376Holliday junction trap shows how cells use recombination and a junction-guardian role of RecQ helicase
Q28255066Hypermutation in human cancer genomes: footprints and mechanisms
Q95300387Hypermutation in single-stranded DNA
Q42969505Identity and function of a large gene network underlying mutagenic repair of DNA breaks
Q33980301Medicine. Combating evolution to fight disease
Q37443630Multiple and Variable NHEJ-Like Genes Are Involved in Resistance to DNA Damage in Streptomyces ambofaciens.
Q37056244Mutation at a distance caused by homopolymeric guanine repeats in Saccharomyces cerevisiae
Q58595432NGS sequencing reveals that many of the genetic variations in transgenic rice plants match the variations found in natural rice population
Q46325763Origins of cancer symposium 2016: exploring tumor complexity
Q47558874Oxygen and RNA in stress-induced mutation.
Q50954596Parent-progeny sequencing indicates higher mutation rates in heterozygotes.
Q38670044Persistent damaged bases in DNA allow mutagenic break repair in Escherichia coli
Q36936978Preferential D-loop extension by a translesion DNA polymerase underlies error-prone recombination
Q37025967R-loops and nicks initiate DNA breakage and genome instability in non-growing Escherichia coli
Q38416186Staphylococcus aureus adapts to oxidative stress by producing H2O2-resistant small-colony variants via the SOS response.
Q64389723Stress-Induced Mutagenesis: Implications in Cancer and Drug Resistance
Q45162588Suppressors of dGTP Starvation in Escherichia coli
Q89697204The Bacillus Subtilis K-State Promotes Stationary-Phase Mutagenesis via Oxidative Damage
Q39326888The Small RNA GcvB Promotes Mutagenic Break Repair by Opposing the Membrane Stress Response
Q28645706The rate of spontaneous mutations in human myeloid cells
Q64387291Tools To Live By: Bacterial DNA Structures Illuminate Cancer
Q34833364Transposable element islands facilitate adaptation to novel environments in an invasive species
Q64096919What is mutation? A chapter in the series: How microbes "jeopardize" the modern synthesis

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