Probing the cooperativity of Thermoplasma acidophilum proteasome core particle gating by NMR spectroscopy

scientific article published on 30 October 2017

Probing the cooperativity of Thermoplasma acidophilum proteasome core particle gating by NMR spectroscopy is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1073/PNAS.1712297114
P8608Fatcat IDrelease_7oerf7ngprdqxn4wmvs2nwgtgy
P932PMC publication ID5699070
P698PubMed publication ID29087330

P50authorLewis E. KayQ29046014
Rui HuangQ43149473
P2093author name stringFelipe Pérez
P2860cites workMechanism of gate opening in the 20S proteasome by the proteasomal ATPasesQ24564109
The structure of the mammalian 20S proteasome at 2.75 A resolutionQ27638997
Interactions of PAN's C-termini with archaeal 20S proteasome and implications for the eukaryotic proteasome–ATPase interactionsQ27646619
Dynamic regulation of archaeal proteasome gate opening as studied by TROSY NMRQ27660397
Electron counting and beam-induced motion correction enable near-atomic-resolution single-particle cryo-EM.Q27677990
Molecular architecture and assembly of the eukaryotic proteasomeQ27693890
An atomic structure of the human 26S proteasomeQ27720380
Structural basis for the antifolding activity of a molecular chaperoneQ27726706
Crystal structure of the 20S proteasome from the archaeon T. acidophilum at 3.4 A resolutionQ27730197
Structure of 20S proteasome from yeast at 2.4 A resolutionQ27735081
NMRPipe: a multidimensional spectral processing system based on UNIX pipesQ27860859
Proteasomes can degrade a significant proportion of cellular proteins independent of ubiquitinationQ27932737
The HEAT repeat protein Blm10 regulates the yeast proteasome by capping the core particleQ27938094
Adapting proteostasis for disease interventionQ28131818
Hybrid proteasomes. Induction by interferon-gamma and contribution to ATP-dependent proteolysisQ28143710
Enzymatic assembly of DNA molecules up to several hundred kilobasesQ28241142
A mechanism of ubiquitin-independent proteasomal degradation of the tumor suppressors p53 and p73Q28305429
Utilization of site-directed spin labeling and high-resolution heteronuclear nuclear magnetic resonance for global fold determination of large proteins with limited nuclear overhauser effect dataQ29617299
Distribution of molecular size within an unfolded state ensemble using small-angle X-ray scattering and pulse field gradient NMR techniquesQ30167627
Isotope labeling strategies for the study of high-molecular-weight proteins by solution NMR spectroscopy.Q30360846
Cross-correlated relaxation enhanced 1H[bond]13C NMR spectroscopy of methyl groups in very high molecular weight proteins and protein complexesQ44554807
Proteasome inhibitors in cancer therapy.Q53752929
Quantitative dynamics and binding studies of the 20S proteasome by NMRQ59082478
Partial molar volumes of proteins: amino acid side-chain contributions derived from the partial molar volumes of some tripeptides over the temperature range 10-90 degrees CQ79214694
Understanding the mechanism of proteasome 20S core particle gatingQ30794898
Architecture and assembly of the archaeal Cdc48*20S proteasomeQ33674570
The 1.9 A structure of a proteasome-11S activator complex and implications for proteasome-PAN/PA700 interactions.Q33987362
Cellular strategies of protein quality controlQ34199521
Regulating the 20S proteasome ubiquitin-independent degradation pathwayQ34318192
Proteasome inhibitors: from research tools to drug candidatesQ34341985
Nmrglue: an open source Python package for the analysis of multidimensional NMR dataQ34605893
Regulated protein turnover: snapshots of the proteasome in actionQ35257872
The proteasome: a suitable antineoplastic targetQ35762448
Keepers at the final gates: regulatory complexes and gating of the proteasome channel.Q35821313
Gates, Channels, and Switches: Elements of the Proteasome MachineQ35862786
The pore of activated 20S proteasomes has an ordered 7-fold symmetric conformationQ36065854
The archaeal proteasome is regulated by a network of AAA ATPasesQ36386004
ClpB N-terminal domain plays a regulatory role in protein disaggregationQ36394450
Endoproteolytic activity of the proteasomeQ36450745
Proteasome allostery as a population shift between interchanging conformersQ36483667
Atomic structure of the 26S proteasome lid reveals the mechanism of deubiquitinase inhibition.Q36568548
Subcellular distribution and dynamics of active proteasome complexes unraveled by a workflow combining in vivo complex cross-linking and quantitative proteomics.Q36666357
Open-gate mutants of the mammalian proteasome show enhanced ubiquitin-conjugate degradationQ36675188
Structure of the human 26S proteasome at a resolution of 3.9 Å.Q37102327
A Dynamic molecular basis for malfunction in disease mutants of p97/VCP.Q37404484
Catalytic mechanism and assembly of the proteasome.Q37407654
Structural basis for dynamic regulation of the human 26S proteasomeQ37469477
Proteasome activatorsQ37826501
Structural biology of the proteasomeQ38081952
Bringing dynamic molecular machines into focus by methyl-TROSY NMR.Q38218233
Prediction of hydrodynamic and other solution properties of rigid proteins from atomic- and residue-level modelsQ38492496
Proteasomal and Autophagic Degradation SystemsQ39275553
Ubiquitin- and ATP-independent proteolytic turnover of p21 by the REGgamma-proteasome pathwayQ40115992
Structural Analysis of the Bacterial Proteasome Activator Bpa in Complex with the 20S ProteasomeQ41600098
An economical method for production of (2)H, (13)CH3-threonine for solution NMR studies of large protein complexes: application to the 670 kDa proteasomeQ42155574
Proteasome disassembly and downregulation is correlated with viability during stationary phaseQ42166737
alpha-synuclein metabolism and aggregation is linked to ubiquitin-independent degradation by the proteasomeQ43816254
The proteasome antechamber maintains substrates in an unfolded stateQ44216424
P4510describes a project that usesNMR spectroscopyQ10359898
P433issue46
P407language of work or nameEnglishQ1860
P304page(s)E9846-E9854
P577publication date2017-10-30
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleProbing the cooperativity of Thermoplasma acidophilum proteasome core particle gating by NMR spectroscopy
P478volume114

Reverse relations

cites work (P2860)
Q99365029Allosteric coupling between α-rings of the 20S proteasome
Q89983079An allosteric switch regulates Mycobacterium tuberculosis ClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR
Q93273338Comparative Structural Analysis of 20S Proteasome Ortholog Protein Complexes by Native Mass Spectrometry
Q103825994Conformational maps of human 20S proteasomes reveal PA28- and immuno-dependent inter-ring crosstalks
Q90744846Cooperative subunit dynamics modulate p97 function
Q89865089Exploring long-range cooperativity in the 20S proteasome core particle from Thermoplasma acidophilum using methyl-TROSY-based NMR
Q57751886Reversible inhibition of the ClpP protease via an N-terminal conformational switch

Search more.