RNA polymerase is poised for activation across the genome

scientific article (publication date: December 2007)

RNA polymerase is poised for activation across the genome is …
instance of (P31):
scholarly articleQ13442814

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P6179Dimensions Publication ID1005958011
P356DOI10.1038/NG.2007.21
P3181OpenCitations bibliographic resource ID894857
P932PMC publication ID2365887
P698PubMed publication ID17994021
P5875ResearchGate publication ID5852883

P2093author name stringParker JS
Shah R
Zeitlinger J
Grissom SF
Adelman K
Gilchrist DA
Muse GW
Nechaev S
P2860cites workHuman transcription elongation factor NELF: identification of novel subunits and reconstitution of the functionally active complexQ24296462
Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA.Q24537283
Attenuation of estrogen receptor alpha-mediated transcription through estrogen-stimulated recruitment of a negative elongation factorQ24562734
Promoter-associated pausing in promoter architecture and postinitiation transcriptional regulationQ28138307
Control of developmental regulators by Polycomb in human embryonic stem cellsQ28235841
A high-resolution map of active promoters in the human genomeQ29614431
Genome-wide map of nucleosome acetylation and methylation in yeastQ29614525
Elongation by RNA polymerase II: the short and long of itQ29614529
The transition from initiation to elongation by RNA polymerase II.Q33671443
The RNA polymerase II elongation complexQ34188475
Breaking barriers to transcription elongationQ34561019
NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in DrosophilaQ35965503
Transcriptional regulation and the role of diverse coactivators in animal cellsQ36024274
Transcription Factor and Polymerase Recruitment, Modification, and Movement on dhsp70 In Vivo in the Minutes following Heat ShockQ36139169
In vivo transcriptional pausing and cap formation on three Drosophila heat shock genesQ36499506
Postinitiation transcriptional control in Drosophila melanogasterQ36733771
RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cellsQ36899837
High-resolution computational models of genome binding events.Q38310716
Transcriptional pausing caused by NELF plays a dual role in regulating immediate-early expression of the junB geneQ38408801
The ability of positive transcription elongation factor B to transactivate human immunodeficiency virus transcription depends on a functional kinase domain, cyclin T1, and Tat.Q39580108
Direct cloning of DNA that interacts in vivo with a specific protein: application to RNA polymerase II and sites of pausing in DrosophilaQ39722928
Transcriptional regulation of the Ig kappa gene by promoter-proximal pausing of RNA polymerase II.Q40924990
Promoter-proximal pausing of RNA polymerase II defines a general rate-limiting step after transcription initiationQ41365790
Hold back of RNA polymerase II at the transcription start site mediates down-regulation of c-myc in vivoQ41535694
Transcription elongation controls cell fate specification in the Drosophila embryoQ42846574
Efficient release from promoter-proximal stall sites requires transcript cleavage factor TFIIS.Q45209737
The block to transcriptional elongation within the human c-myc gene is determined in the promoter-proximal regionQ49162171
The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.Q52459657
Short transcripts of the ternary complex provide insight into RNA polymerase II elongational pausing.Q52536804
Genome-wide analyses of steroid- and radiation-triggered programmed cell death in Drosophila.Q53658652
P433issue12
P407language of work or nameEnglishQ1860
P304page(s)1507-11
P577publication date2007-12-01
P1433published inNature GeneticsQ976454
P1476titleRNA polymerase is poised for activation across the genome
P478volume39

Reverse relations

cites work (P2860)
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Q84346986Guest Editor's Introduction. Controlling which genes are transcriptionally expressed is key to the generation and maintenance of the repertoire of cell types needed to support the mammalian lifestyle
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Q35125991Interferon regulatory factor 1 marks activated genes and can induce target gene expression in systemic lupus erythematosus
Q34140931Interferon γ-inducible protein (IFI) 16 transcriptionally regulates type i interferons and other interferon-stimulated genes and controls the interferon response to both DNA and RNA viruses
Q37724099Interferon-γ resets muscle cell fate by stimulating the sequential recruitment of JARID2 and PRC2 to promoters to repress myogenesis
Q38024157Interplay between chromatin modifications and paused RNA polymerase II in dynamic transition between stalled and activated genes
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Q37367998Isolation and functional analysis of RNA polymerase II elongation complexes.
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Q91595828Kethoxal-assisted single-stranded DNA sequencing captures global transcription dynamics and enhancer activity in situ
Q37488718Kinetics of promoter Pol II on Hsp70 reveal stable pausing and key insights into its regulation.
Q24646322LARP7 is a stable component of the 7SK snRNP while P-TEFb, HEXIM1 and hnRNP A1 are reversibly associated
Q34019641LARP7 suppresses P-TEFb activity to inhibit breast cancer progression and metastasis
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Q36098618Linking Core Promoter Classes to Circadian Transcription
Q34934209Linking stochastic fluctuations in chromatin structure and gene expression
Q35897282Local chromatin dynamics of transcription factors imply cell-lineage specific functions during cellular differentiation
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Q37528860Long non-coding RNA identification over mouse brain development by integrative modeling of chromatin and genomic features
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Q33826920Mechanism and factors that control HIV-1 transcription and latency activation
Q37211398Mechanism of sequence-specific pausing of bacterial RNA polymerase
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Q53606806Mechanisms of Evolutionary Innovation Point to Genetic Control Logic as the Key Difference Between Prokaryotes and Eukaryotes.
Q36293078Mechanisms of Groucho-mediated repression revealed by genome-wide analysis of Groucho binding and activity
Q41769072Mechanisms of HIV Transcriptional Regulation and Their Contribution to Latency
Q36710552Mechanisms of backtrack recovery by RNA polymerases I and II.
Q39206646Mediator MED23 regulates basal transcription in vivo via an interaction with P-TEFb
Q37843610Mediator and post-recruitment regulation of RNA polymerase II
Q47073703Mediator subunit 12 coordinates intrinsic and extrinsic control of epithalamic development
Q38029260Menin as a hub controlling mixed lineage leukemia
Q33679131Metal transcription factor-1 regulation via MREs in the transcribed regions of selenoprotein H and other metal-responsive genes
Q34258857Metazoan promoters: emerging characteristics and insights into transcriptional regulation
Q28084780Minireview: nuclear receptor coregulators of the p160 family: insights into inflammation and metabolism
Q34556377Mll3 and Mll4 Facilitate Enhancer RNA Synthesis and Transcription from Promoters Independently of H3K4 Monomethylation
Q37615912Modifications of RNA polymerase II are pivotal in regulating gene expression states
Q38161393Molecular and Epigenetic Mechanisms of MLL in Human Leukemogenesis
Q42472280Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation
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Q100559556Motif 1 Binding Protein suppresses wingless to promote eye fate in Drosophila
Q28475186Mouse cofactor of BRCA1 (Cobra1) is required for early embryogenesis.
Q33576499Multifunctional enhancers regulate mouse and human vitamin D receptor gene transcription
Q37211018Multiple P-TEFbs cooperatively regulate the release of promoter-proximally paused RNA polymerase II.
Q90187891NELF Regulates a Promoter-Proximal Step Distinct from RNA Pol II Pause-Release
Q36710845NELF and GAGA factor are linked to promoter-proximal pausing at many genes in Drosophila
Q28474810NELF potentiates gene transcription in the Drosophila embryo
Q36802956NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly
Q92535255Nascent RNA analyses: tracking transcription and its regulation
Q58713866Nascent RNA sequencing analysis provides insights into enhancer-mediated gene regulation
Q28302903Nascent RNA sequencing reveals widespread pausing and divergent initiation at human promoters
Q35927818Native elongating transcript sequencing reveals human transcriptional activity at nucleotide resolution
Q38629873Negative elongation factor accelerates the rate at which heat shock genes are shut off by facilitating dissociation of heat shock factor
Q33602605Negative elongation factor is required for the maintenance of proviral latency but does not induce promoter-proximal pausing of RNA polymerase II on the HIV long terminal repeat
Q42776375Neuronal identity genes regulated by super-enhancers are preferentially down-regulated in the striatum of Huntington's disease mice
Q34919381New insights into the control of HIV-1 transcription: when Tat meets the 7SK snRNP and super elongation complex (SEC).
Q33565208Noncanonical transcript forms in yeast and their regulation during environmental stress
Q47158530Nuclear EGFR and Integrator/Super Elongation Complex concurrently binds to Immediate Early Genes for gene transactivation
Q34499614Nuclear RNA sequencing of the mouse erythroid cell transcriptome
Q27348460Nuclear pore proteins nup153 and megator define transcriptionally active regions in the Drosophila genome
Q37091501Nuclear receptor location analyses in mammalian genomes: from gene regulation to regulatory networks
Q37326387Nucleosome organization in the Drosophila genome.
Q36883122Nucleosome positioning and gene regulation: advances through genomics
Q39416252O-GlcNAcase Is an RNA Polymerase II Elongation Factor Coupled to Pausing Factors SPT5 and TIF1β.
Q38327596Oct-1 cooperates with the TATA binding initiation complex to control rapid transcription of human iNOS.
Q38028210One step back before moving forward: regulation of transcription elongation by arrest and backtracking.
Q27311517P-TEFb, the super elongation complex and mediator regulate a subset of non-paused genes during early Drosophila embryo development
Q37356131P-TEFb- the final frontier
Q36371761PAF1, a Molecular Regulator of Promoter-Proximal Pausing by RNA Polymerase II
Q92661276PARylation During Transcription: Insights into the Fine-Tuning Mechanism and Regulation
Q38955475Pathogenesis of Börjeson-Forssman-Lehmann syndrome: Insights from PHF6 function
Q39211326Pause & go: from the discovery of RNA polymerase pausing to its functional implications.
Q38364406Paused Pol II captures enhancer activity and acts as a potent insulator
Q37874803Paused RNA polymerase II as a developmental checkpoint
Q36974098Pausing for thought: disrupting the early transcription elongation checkpoint leads to developmental defects and tumourigenesis.
Q34346839Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation
Q35470656Pausing of RNA polymerase II regulates mammalian developmental potential through control of signaling networks.
Q35950455Penetrance of biallelic SMARCAL1 mutations is associated with environmental and genetic disturbances of gene expression
Q33348473Plant Elongator regulates auxin-related genes during RNA polymerase II transcription elongation
Q36611111Poised RNA polymerase II changes over developmental time and prepares genes for future expression
Q33522209Poised transcription factories prime silent uPA gene prior to activation.
Q34048002Pol II and its associated epigenetic marks are present at Pol III-transcribed noncoding RNA genes.
Q33631279Pol II docking and pausing at growth and stress genes in C. elegans
Q34494012Pol II waiting in the starting gates: Regulating the transition from transcription initiation into productive elongation.
Q35248792Pol III binding in six mammals shows conservation among amino acid isotypes despite divergence among tRNA genes.
Q34570800Polycomb group complexes--many combinations, many functions
Q34548266Polycomb preferentially targets stalled promoters of coding and noncoding transcripts
Q37875927Polycomb proteins in mammalian cell differentiation and plasticity
Q47556292Polymorphism in Tmem132d regulates expression and anxiety-related behavior through binding of RNA polymerase II complex
Q42609408Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation
Q37099958Postrecruitment regulation of RNA polymerase II directs rapid signaling responses at the promoters of estrogen target genes
Q38606913Precise maps of RNA polymerase reveal how promoters direct initiation and pausing
Q42137507Predicting promoter activities of primary human DNA sequences
Q34065439Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data
Q36821394Premature termination of transcription by RNAP II: the beginning of the end.
Q41902743Prevalence of RNA polymerase stalling at Escherichia coli promoters after open complex formation
Q36549002Probabilistic modelling of chromatin code landscape reveals functional diversity of enhancer-like chromatin states
Q36676820Promoter elements associated with RNA Pol II stalling in the Drosophila embryo
Q37284766Promoter proximal pausing on genes in metazoans
Q37993419Promoter-associated RNAs and promoter-targeted RNAs
Q33779012Promoter-bound p300 complexes facilitate post-mitotic transmission of transcriptional memory
Q37764482Promoter-proximal pausing and its release: molecular mechanisms and physiological functions
Q92254256Promoter-proximal pausing of RNA polymerase II: a nexus of gene regulation
Q29394946Promoter-proximal pausing of RNA polymerase II: emerging roles in metazoans
Q38435681RNA Pol II accumulates at promoters of growth genes during developmental arrest.
Q37056307RNA Polymerase II cluster dynamics predict mRNA output in living cells
Q37992154RNA polymerase II elongation control
Q36505626RNA polymerase II pausing as a context-dependent reader of the genome
Q35562114RNA polymerase II pausing can be retained or acquired during activation of genes involved in the epithelial to mesenchymal transition.
Q34305741RNA polymerase II pausing downstream of core histone genes is different from genes producing polyadenylated transcripts
Q37618666RNA polymerase II pausing during development
Q41663773RNA polymerase II pausing modulates hematopoietic stem cell emergence in zebrafish
Q36739436RNA polymerase II stalling: loading at the start prepares genes for a sprint
Q34046663RNA polymerase II transcription elongation and Pol II CTD Ser2 phosphorylation: A tail of two kinases
Q34960186RNA polymerase II transcription elongation control
Q27666396RNA polymerase and transcription elongation factor Spt4/5 complex structure
Q93927358RNA polymerase caught loitering
Q33953340RNA polymerase complexes cooperate to relieve the nucleosomal barrier and evict histones
Q34080284RNA polymerase mapping during stress responses reveals widespread nonproductive transcription in yeast
Q38341092RNA polymerase trafficking in Bacillus subtilis cells.
Q37031722RNA splicing regulates the temporal order of TNF-induced gene expression
Q33578947RNAi screen in Drosophila larvae identifies histone deacetylase 3 as a positive regulator of the hsp70 heat shock gene expression during heat shock
Q28576463Rapid activity-induced transcription of Arc and other IEGs relies on poised RNA polymerase II
Q27302880Rapid transcriptional pulsing dynamics of high expressing retroviral transgenes in embryonic stem cells
Q41944247Rapid, transcription-independent loss of nucleosomes over a large chromatin domain at Hsp70 loci
Q38562823Ready, pause, go: regulation of RNA polymerase II pausing and release by cellular signaling pathways
Q33564189Real-time observation of the transition from transcription initiation to elongation of the RNA polymerase
Q29392187Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells
Q35945067Regulating the regulators: the pervasive effects of Pol II pausing on stimulus-responsive gene networks
Q42045280Regulation of Hox gene activity by transcriptional elongation in Drosophila
Q41767088Regulation of an inducible promoter by an HP1beta-HP1gamma switch
Q54188370Regulation of chromatin states and gene expression during HSN neuronal maturation is mediated by EOR-1/PLZF, MAU-2/cohesin loader, and SWI/SNF complex.
Q36735223Regulation of the transcriptional activity of poised RNA polymerase II by the elongation factor ELL
Q24650920Regulator trafficking on bacterial transcription units in vivo
Q21144996Regulon-specific control of transcription elongation across the yeast genome
Q64088219Reporter-ChIP-nexus reveals strong contribution of the initiator sequence to RNA polymerase pausing
Q36042582Repression of Hox genes by LMP1 in nasopharyngeal carcinoma and modulation of glycolytic pathway genes by HoxC8.
Q33501748Repression of RNA polymerase II elongation in vivo is critically dependent on the C-terminus of Spt5.
Q37631411Role of noncoding RNAs in the regulation of P-TEFb availability and enzymatic activity
Q37292763S region sequence, RNA polymerase II, and histone modifications create chromatin accessibility during class switch recombination
Q42552805SAGA function in tissue-specific gene expression
Q35077092SUV420H2-mediated H4K20 trimethylation enforces RNA polymerase II promoter-proximal pausing by blocking hMOF-dependent H4K16 acetylation
Q47876829Selective expression of the transcription elongation factor ELL3 in B cells prior to ELL2 drives proliferation and survival
Q35001684Sequential changes at differentiation gene promoters as they become active in a stem cell lineage
Q35770298Ser-634 and Ser-636 of Kaposi's Sarcoma-Associated Herpesvirus RTA are Involved in Transactivation and are Potential Cdk9 Phosphorylation Sites
Q30491199Single molecule transcription elongation
Q38043827Single-molecule studies of RNAPII elongation
Q36545639Sirt1 suppresses RNA synthesis after UV irradiation in combined xeroderma pigmentosum group D/Cockayne syndrome (XP-D/CS) cells
Q90132296Spatial organization of RNA polymerase and its relationship with transcription in Escherichia coli
Q38109752Splitting hares and tortoises: a classification of neuronal immediate early gene transcription based on poised RNA polymerase II.
Q37196147Spt6 enhances the elongation rate of RNA polymerase II in vivo
Q37352913Stable pausing by RNA polymerase II provides an opportunity to target and integrate regulatory signals
Q34799963Stably paused genes revealed through inhibition of transcription initiation by the TFIIH inhibitor triptolide
Q42241186Stalled Hox promoters as chromosomal boundaries
Q80113569Stalled polymerases and transcriptional regulation
Q52859841Stochastic resetting in backtrack recovery by RNA polymerases.
Q36811094Stress from Nucleotide Depletion Activates the Transcriptional Regulator HEXIM1 to Suppress Melanoma.
Q36238292Structural analysis of nucleosomal barrier to transcription
Q40275061Super elongation complex promotes early HIV transcription and its function is modulated by P-TEFb
Q37083712TAF4 takes flight
Q90229016TCEA1 regulates the proliferative potential of mouse myeloid cells
Q24337625TIF1gamma controls erythroid cell fate by regulating transcription elongation
Q34307694TRIM28 regulates RNA polymerase II promoter-proximal pausing and pause release
Q35967446Targeting DOT1L and HOX gene expression in MLL-rearranged leukemia and beyond
Q38297247Temporal Dissection of Rate Limiting Transcriptional Events Using Pol II ChIP and RNA Analysis of Adrenergic Stress Gene Activation.
Q36776327The Bin3 RNA methyltransferase targets 7SK RNA to control transcription and translation
Q36444189The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub.
Q36435140The DUBm subunit Sgf11 is required for mRNA export and interacts with Cbp80 in Drosophila
Q24597477The Drosophila 7SK snRNP and the essential role of dHEXIM in development
Q47251709The Drosophila CLAMP protein associates with diverse proteins on chromatin
Q47857382The Hox proteins Ubx and AbdA collaborate with the transcription pausing factor M1BP to regulate gene transcription
Q38140886The JAK-STAT pathway in hypertrophic stress signaling and genomic stress response
Q28068962The Many Faces of Elongator in Neurodevelopment and Disease
Q38043907The Mediator complex and transcription elongation
Q28299679The Mediator complex and transcription regulation
Q26849595The Mediator complex: a central integrator of transcription
Q34313744The NSL complex regulates housekeeping genes in Drosophila.
Q51547007The Pisum sativum psp54 gene requires ABI3 and a chromatin remodeller to switch from a poised to a transcriptionally active state.
Q64054855The RNA helicase UPF1 associates with mRNAs co-transcriptionally and is required for the release of mRNAs from gene loci
Q34303212The RNA polymerase II CTD coordinates transcription and RNA processing.
Q50141694The Role of Noncoding RNA Pseudouridylation in Nuclear Gene Expression Events.
Q27664689The Transcription Factor Spn1 Regulates Gene Expression via a Highly Conserved Novel Structural Motif
Q35910444The Transition of Poised RNA Polymerase II to an Actively Elongating State Is a "Complex" Affair
Q55492193The Ubx Polycomb response element bypasses an unpaired Fab-8 insulator via cis transvection in Drosophila.
Q36959286The X-linked intellectual disability protein PHF6 associates with the PAF1 complex and regulates neuronal migration in the mammalian brain.
Q37200232The ZFP-1(AF10)/DOT-1 complex opposes H2B ubiquitination to reduce Pol II transcription
Q36107018The chromatin remodeling and mRNA splicing functions of the Brahma (SWI/SNF) complex are mediated by the SNR1/SNF5 regulatory subunit
Q37634306The complex eukaryotic transcriptome: unexpected pervasive transcription and novel small RNAs
Q35035409The elongin complex antagonizes the chromatin factor Corto for vein versus intervein cell identity in Drosophila wings
Q89901315The embryonic linker histone dBigH1 alters the functional state of active chromatin
Q39005055The emerging picture of CDK9/P-TEFb: more than 20 years of advances since PITALRE.
Q24336460The euchromatic and heterochromatic landscapes are shaped by antagonizing effects of transcription on H2A.Z deposition
Q33369072The genomic distribution and function of histone variant HTZ-1 during C. elegans embryogenesis
Q36070586The histone H3 Lys 27 demethylase JMJD3 regulates gene expression by impacting transcriptional elongation
Q27930846The histone H3K36 demethylase Rph1/KDM4 regulates the expression of the photoreactivation gene PHR1
Q28276700The human Mediator complex: a versatile, genome-wide regulator of transcription
Q21136168The mechanism of release of P-TEFb and HEXIM1 from the 7SK snRNP by viral and cellular activators includes a conformational change in 7SK
Q37809563The next generation: using new sequencing technologies to analyse gene regulation
Q50459532The origins of developmental gene regulation
Q36052947The pathogenesis of mixed-lineage leukemia
Q92534361The pause-initiation limit restricts transcription activation in human cells
Q42046257The polycomb group mutant esc leads to augmented levels of paused Pol II in the Drosophila embryo
Q37417300The presence of RNA polymerase II, active or stalled, predicts epigenetic fate of promoter CpG islands
Q37455573The structure-function link of compensated chromatin in Drosophila
Q27692038The super elongation complex (SEC) and MLL in development and disease
Q36210873The super elongation complex family of RNA polymerase II elongation factors: gene target specificity and transcriptional output
Q41680259The transcriptional coactivators SAGA, SWI/SNF, and mediator make distinct contributions to activation of glucose-repressed genes
Q29035794The transition from transcriptional initiation to elongation
Q38837437There goes the neighborhood: Assembly of transcriptional complexes during the regulation of metabolism and inflammation by the glucocorticoid receptor.
Q36520899TiF1-gamma plays an essential role in murine hematopoiesis and regulates transcriptional elongation of erythroid genes
Q36972178To grow or not to grow: nutritional control of development during Caenorhabditis elegans L1 arrest
Q37156727Topoisomerases facilitate transcription of long genes linked to autism
Q26801362Transcription Blockage Leads to New Beginnings
Q42137522Transcription control by long non-coding RNAs
Q37603622Transcription dynamics
Q34499436Transcription elongation and tissue-specific somatic CAG instability
Q37194356Transcription elongation control by the 7SK snRNP complex: Releasing the pause.
Q48731754Transcription elongation factors represent in vivo cancer dependencies in glioblastoma
Q39069527Transcription elongation regulator 1 (TCERG1) regulates competent RNA polymerase II-mediated elongation of HIV-1 transcription and facilitates efficient viral replication.
Q34426416Transcription elongation. Heterogeneous tracking of RNA polymerase and its biological implications
Q36759836Transcription factor Sp3 represses expression of p21CIP¹ via inhibition of productive elongation by RNA polymerase II.
Q26864339Transcription goes digital
Q36804846Transcription induces strand-specific mutations at the 5' end of human genes
Q47653997Transcription pausing: biological significance of thermal fluctuations biased by repetitive genomic sequences.
Q39442921Transcription regulation through promoter-proximal pausing of RNA polymerase II.
Q50301036Transcription start site profiling uncovers divergent transcription and enhancer-associated RNAs in Drosophila melanogaster
Q37626318Transcription-generated torsional stress destabilizes nucleosomes.
Q63433321Transcriptional Burst Initiation and Polymerase Pause Release Are Key Control Points of Transcriptional Regulation
Q36435072Transcriptional activation of yeast genes disrupts intragenic nucleosome phasing
Q37961880Transcriptional control of embryonic and induced pluripotent stem cells
Q37622051Transcriptional control of the inflammatory response
Q34539909Transcriptional dynamics elicited by a short pulse of notch activation involves feed-forward regulation by E(spl)/Hes genes
Q36902905Transcriptional elongation checkpoint control in development and disease
Q36438053Transcriptional elongation requires DNA break-induced signalling
Q36343296Transcriptional pausing controls a rapid antiviral innate immune response in Drosophila
Q47624989Transcriptional precision and accuracy in development: from measurements to models and mechanisms
Q40442784Transcriptional regulation by Pol II(G) involving mediator and competitive interactions of Gdown1 and TFIIF with Pol II.
Q36562036Transcriptional regulation patterns revealed by high resolution chromatin immunoprecipitation during cardiac hypertrophy
Q42428241Transcriptional regulation. Meeting on regulatory mechanisms in eukaryotic transcription
Q28478116Transcriptional regulation: effects of promoter proximal pausing on speed, synchrony and reliability
Q36066304Transcriptional repression via antilooping in the Drosophila embryo
Q35641521Translational Initiation at a Non-AUG Start Codon for Human and Mouse Negative Elongation Factor-B
Q37203938Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation
Q37238973Two roles for the Drosophila IKK complex in the activation of Relish and the induction of antimicrobial peptide genes
Q28587655UTX mediates demethylation of H3K27me3 at muscle-specific genes during myogenesis
Q33945643UVB induces a genome-wide acting negative regulatory mechanism that operates at the level of transcription initiation in human cells
Q36021678Unusual combinatorial involvement of poly-A/T tracts in organizing genes and chromatin in Dictyostelium
Q36456815UpSET recruits HDAC complexes and restricts chromatin accessibility and acetylation at promoter regions
Q33728129UpSET-ting the balance: modulating open chromatin features in metazoan genomes
Q35989796Ups and Downs of Poised RNA Polymerase II in B-Cells
Q36201678Using ChIP-chip and ChIP-seq to study the regulation of gene expression: genome-wide localization studies reveal widespread regulation of transcription elongation
Q36517932Using ChIP-chip technology to reveal common principles of transcriptional repression in normal and cancer cells
Q55097752Viral targeting of TFIIB impairs de novo polymerase II recruitment and affects antiviral immunity.
Q35026881Viral-host interactions that control HIV-1 transcriptional elongation
Q37068274Wnt signaling targets ETO coactivation domain of TAF4/TFIID in vivo
Q92217036Writing a wrong: Coupled RNA polymerase II transcription and RNA quality control
Q39582674X chromosome dosage compensation via enhanced transcriptional elongation in Drosophila
Q28508693beta-Catenin primes organizer gene expression by recruiting a histone H3 arginine 8 methyltransferase, Prmt2
Q28275988c-Myc is a universal amplifier of expressed genes in lymphocytes and embryonic stem cells
Q24629119c-Myc regulates transcriptional pause release
Q45954525dDsk2 regulates H2Bub1 and RNA polymerase II pausing at dHP1c complex target genes.
Q30980309groHMM: a computational tool for identifying unannotated and cell type-specific transcription units from global run-on sequencing data
Q42177062mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription

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