| scholarly article | Q13442814 |
| P8978 | DBLP publication ID | journals/bmcsb/WinterbachMRWR13 |
| P6179 | Dimensions Publication ID | 1048352399 |
| P356 | DOI | 10.1186/1752-0509-7-90 |
| P932 | PMC publication ID | 4231395 |
| P698 | PubMed publication ID | 24041013 |
| P5875 | ResearchGate publication ID | 256663585 |
| P2093 | author name string | Huijuan Wang | |
| Dick de Ridder | |||
| Piet Van Mieghem | |||
| Marcel Reinders | |||
| Wynand Winterbach | |||
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| Protein bipartivity and essentiality in the yeast protein-protein interaction network | Q80196261 | ||
| Network topology and the evolution of dynamics in an artificial genetic regulatory network model created by whole genome duplication and divergence | Q83227849 | ||
| How scale-free are biological networks | Q83363278 | ||
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| PINALOG: a novel approach to align protein interaction networks--implications for complex detection and function prediction. | Q35916743 | ||
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| A map of human cancer signaling | Q36327214 | ||
| Global network alignment using multiscale spectral signatures | Q36432222 | ||
| Probabilistic assembly of human protein interaction networks from label-free quantitative proteomics | Q36446314 | ||
| Graph-based methods for analysing networks in cell biology | Q36552759 | ||
| Observability of complex systems | Q36617090 | ||
| The evolution of modularity in bacterial metabolic networks. | Q36657624 | ||
| Cascading failure and robustness in metabolic networks | Q36869768 | ||
| Protein networks in disease | Q37125547 | ||
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| Finding friends and enemies in an enemies-only network: a graph diffusion kernel for predicting novel genetic interactions and co-complex membership from yeast genetic interactions | Q41345892 | ||
| Topological network alignment uncovers biological function and phylogeny | Q41592105 | ||
| Influence of metabolic network structure and function on enzyme evolution | Q42235124 | ||
| Still stratus not altocumulus: further evidence against the date/party hub distinction | Q42745582 | ||
| Systematic identification of functional orthologs based on protein network comparison | Q43252162 | ||
| Integrating metabolic, transcriptional regulatory and signal transduction models in Escherichia coli. | Q43575020 | ||
| Statistical analysis of global connectivity and activity distributions in cellular networks. | Q44214456 | ||
| Gene co-expression network topology provides a framework for molecular characterization of cellular state | Q45205691 | ||
| Functional and evolutionary inference in gene networks: does topology matter? | Q45813418 | ||
| Mining coherent dense subgraphs across massive biological networks for functional discovery | Q46339422 | ||
| On the structure of protein-protein interaction networks | Q47356561 | ||
| Protein complex prediction via cost-based clustering | Q47387430 | ||
| Metabolic network modularity arising from simple growth processes | Q47563790 | ||
| Gene regulatory network growth by duplication | Q47610427 | ||
| Identifying functional modules using expression profiles and confidence-scored protein interactions | Q48291481 | ||
| Birth of scale-free molecular networks and the number of distinct DNA and protein domains per genome. | Q48337100 | ||
| Localized network centrality and essentiality in the yeast-protein interaction network | Q48453179 | ||
| The genetic landscape of a cell | Q28131628 | ||
| A protein interaction map of Drosophila melanogaster | Q28131783 | ||
| Evolutionary capacitance as a general feature of complex gene networks | Q28191006 | ||
| Specificity and stability in topology of protein networks | Q28216450 | ||
| The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases | Q28253558 | ||
| Robustness can evolve gradually in complex regulatory gene networks with varying topology | Q28469133 | ||
| Structure of protein interaction networks and their implications on drug design | Q28476325 | ||
| Epistatic interaction maps relative to multiple metabolic phenotypes | Q28477135 | ||
| Randomizing Genome-Scale Metabolic Networks | Q28479041 | ||
| The protein-protein interaction map of Helicobacter pylori | Q28484787 | ||
| Evolution of biological interaction networks: from models to real data | Q28730461 | ||
| Systems-level cancer gene identification from protein interaction network topology applied to melanogenesis-related functional genomics data | Q28748376 | ||
| Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth | Q29397612 | ||
| Lethality and centrality in protein networks | Q29547267 | ||
| KEGG for integration and interpretation of large-scale molecular data sets | Q29547277 | ||
| Network motifs: simple building blocks of complex networks | Q29547340 | ||
| Network medicine: a network-based approach to human disease | Q29547462 | ||
| From molecular to modular cell biology | Q29547493 | ||
| The large-scale organization of metabolic networks | Q29547498 | ||
| Evidence for dynamically organized modularity in the yeast protein-protein interaction network | Q29614449 | ||
| Discovering regulatory and signalling circuits in molecular interaction networks | Q29614951 | ||
| Network motifs: theory and experimental approaches | Q29615325 | ||
| Network-based classification of breast cancer metastasis | Q29616384 | ||
| Computational systems biology | Q29616655 | ||
| Evolutionary rate in the protein interaction network | Q29617048 | ||
| A general framework for weighted gene co-expression network analysis | Q29617580 | ||
| Hierarchical organization of modularity in metabolic networks | Q29618451 | ||
| JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles | Q29619342 | ||
| A network of protein-protein interactions in yeast | Q30004209 | ||
| Superfamilies of evolved and designed networks. | Q30339061 | ||
| DNA–protein interactions: methods for detection and analysis | Q31049689 | ||
| Convergent evolution of modularity in metabolic networks through different community structures | Q31090499 | ||
| Characterizing disease states from topological properties of transcriptional regulatory networks | Q33241989 | ||
| Why do hubs tend to be essential in protein networks? | Q33245657 | ||
| Identification of key processes underlying cancer phenotypes using biologic pathway analysis | Q33283999 | ||
| Including metabolite concentrations into flux balance analysis: thermodynamic realizability as a constraint on flux distributions in metabolic networks | Q33286434 | ||
| Metabolic pathway alignment between species using a comprehensive and flexible similarity measure | Q33395883 | ||
| Disease candidate gene identification and prioritization using protein interaction networks | Q33412922 | ||
| Bayesian Markov Random Field analysis for protein function prediction based on network data | Q33535782 | ||
| Revisiting date and party hubs: novel approaches to role assignment in protein interaction networks | Q33619022 | ||
| Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models | Q33642720 | ||
| Dynamic functional modules in co-expressed protein interaction networks of dilated cardiomyopathy | Q33719832 | ||
| Multi-level reproducibility of signature hubs in human interactome for breast cancer metastasis | Q33741210 | ||
| Clustering gene expression patterns | Q33882299 | ||
| A toolbox model of evolution of metabolic pathways on networks of arbitrary topology | Q33916616 | ||
| Environmental versatility promotes modularity in genome-scale metabolic networks | Q34001801 | ||
| The identification of functional modules from the genomic association of genes | Q34027115 | ||
| Spontaneous evolution of modularity and network motifs | Q34048031 | ||
| Biological role of noise encoded in a genetic network motif | Q34067922 | ||
| Protein evolution in yeast transcription factor subnetworks | Q34189209 | ||
| Protein interaction data curation: the International Molecular Exchange (IMEx) consortium | Q34210192 | ||
| The connectivity structure, giant strong component and centrality of metabolic networks | Q34215978 | ||
| “Guilt by Association” Is the Exception Rather Than the Rule in Gene Networks | Q34220929 | ||
| Scalable global alignment for multiple biological networks | Q34247846 | ||
| Constraining the metabolic genotype-phenotype relationship using a phylogeny of in silico methods | Q34257056 | ||
| Identification of high-quality cancer prognostic markers and metastasis network modules | Q34275507 | ||
| Structure and evolution of transcriptional regulatory networks | Q34326530 | ||
| Modular organization of cellular networks | Q34329388 | ||
| Peeling the yeast protein network | Q34380924 | ||
| Revisiting "scale-free" networks | Q34451081 | ||
| Pathway alignment: application to the comparative analysis of glycolytic enzymes | Q34505049 | ||
| Chapter 4: Protein Interactions and Disease | Q34539656 | ||
| Chapter 5: Network biology approach to complex diseases. | Q34539662 | ||
| Does Habitat Variability Really Promote Metabolic Network Modularity? | Q34674915 | ||
| Dynamic modularity in protein interaction networks predicts breast cancer outcome | Q34934057 | ||
| Topological structure analysis of the protein-protein interaction network in budding yeast | Q34980439 | ||
| Using graph theory to analyze biological networks | Q35005792 | ||
| Building with a scaffold: emerging strategies for high- to low-level cellular modeling | Q35146255 | ||
| Principles of microRNA regulation of a human cellular signaling network | Q35193525 | ||
| P921 | main subject | molecular interaction | Q33059490 |
| P304 | page(s) | 90 | |
| P577 | publication date | 2013-09-16 | |
| P1433 | published in | BMC Systems Biology | Q4835949 |
| P1476 | title | Topology of molecular interaction networks | |
| P478 | volume | 7 |
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| Q64096148 | Gene expression changes associated with the evolutionary loss of a metabolic trait: lack of lipogenesis in parasitoids |
| Q37236340 | HVint: A Strategy for Identifying Novel Protein-Protein Interactions in Herpes Simplex Virus Type 1 |
| Q35627802 | Hi-C Chromatin Interaction Networks Predict Co-expression in the Mouse Cortex. |
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| Q92862439 | Natural Product Target Network Reveals Potential for Cancer Combination Therapies |
| Q49983962 | Network Analyses in Plant Pathogens |
| Q64984746 | Network Architecture and Mutational Sensitivity of the C. elegans Metabolome. |
| Q92138355 | Network analysis of hyphae forming proteins in Candida albicans identifies important proteins responsible for pathovirulence in the organism |
| Q34427904 | Network-based Prediction of Cancer under Genetic Storm |
| Q42282068 | Quantitative Analysis of Robustness of Dynamic Response and Signal Transfer in Insulin mediated PI3K/AKT Pathway |
| Q40749831 | Scale-space measures for graph topology link protein network architecture to function |
| Q97561863 | Small-world networks of prognostic genes associated with lung adenocarcinoma development |
| Q41580357 | Structural and Functional View of Polypharmacology. |
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